ddab4eeb1a
Remove SHA1 utility used in doc Makefile
2019-08-22 14:11:32 -06:00
574e4067dc
Add documentation files in RST format
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This is the first step for moving the documentation format from *.txt to the
*.rst format.
In the last years we've been automatically converting txt files from Steve's
markup into RST to generate the documentation pages via Sphinx. The decision
has now been made to fully migrate to RST and avoid the conversion in the
future.
This will enable us to fully use RST and Sphinx to improve the documentation.
For the intermediate period, while there are still pending PRs with
documentation changes, we will keep both source files and update the RST files
accordingly.
2019-08-22 14:11:32 -06:00
1599fcef12
Merge pull request #1640 from akohlmey/fix-wall-morse
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Implement fix wall/morse
2019-08-21 22:17:08 -04:00
ad83f0e2e3
update docs to add morse in a similar style to fix wall/region
2019-08-21 17:12:04 -04:00
aac557a98f
integrate fix wall/morse docs properly into manual
2019-08-21 16:00:14 -04:00
6a584672e8
implement fix wall/morse based on fix wall/region and fix wall/harmonic
2019-08-21 16:00:14 -04:00
82b3fad152
Merge pull request #1628 from erozic/feature-wall-region-morse
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Added "morse" style to the "wall/region" fix
2019-08-21 11:47:43 -04:00
bf85bff783
Merge pull request #1641 from rbberger/fix_external_via_python
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Extend lib interface to allow setting fix external callbacks
2019-08-21 10:54:59 -04:00
cfa9179b28
Merge pull request #1503 from etomica/master
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Implement HMA compute in LAMMPS
2019-08-21 00:12:16 -04:00
42b282fe36
Merge pull request #1637 from dsbolin/granular_bug_fixes
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Bug fix for fix/wall/gran
2019-08-21 00:09:04 -04:00
c686df1aba
Merge pull request #1621 from akohlmey/collected-small-fixes
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Collected small fixes and updates
2019-08-20 19:36:10 -04:00
ffc023adfe
Merge pull request #1626 from erozic/feature-pair-cossq
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New pair_style cosine/squared
2019-08-20 19:35:45 -04:00
9fc021d8db
Merge pull request #1638 from ellio167/kim-api-2.1.3
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bump kim-api to 2.1.3
2019-08-20 19:34:44 -04:00
91a80c3c21
Silence another compiler warning
2019-08-20 19:28:03 -04:00
fffe2eb958
Silence compiler warning
2019-08-20 19:26:26 -04:00
14b93f91e2
Compute HMA style name should be lowercase (and match the docs)
2019-08-20 19:25:19 -04:00
6b1df07298
compute HMA style name should be lowercase
2019-08-20 19:24:22 -04:00
b79e5401d4
Increase string buffer size to 128
2019-08-20 16:55:36 -06:00
9b703c6675
Fix file name
2019-08-20 16:54:37 -06:00
f4254cba09
Use snprintf instead of sprintf
2019-08-20 16:47:43 -06:00
b5a79f9616
update fix wall/region docs as requested by @sjplimp (i hope)
2019-08-20 16:50:49 -04:00
7beb2a53f2
Add missing comment
2019-08-20 14:12:14 -06:00
2b42428d28
Extend lib interface to set fix external callback
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This allows creating a callback in Python and attaching it to
a fix external instance.
2019-08-20 14:04:49 -06:00
88ff8ce2d7
fix spelling issues in docs
2019-08-20 12:05:14 -04:00
6d5089e078
Merge branch 'master' into collected-small-fixes
2019-08-20 12:01:52 -04:00
3d9e737a19
change order of morse style wall potential parameters to be consistent with pair morse and bond morse
2019-08-20 11:27:29 -04:00
a0f49f27d9
Final tweaks to HMA documentation
2019-08-19 18:15:19 -04:00
9a849a4d4f
Merge branch 'master' into master
2019-08-19 15:55:39 -06:00
b72215fe02
add support for automated checksumming of downloaded sources to kim api conventional build
2019-08-16 12:43:37 -04:00
42711245a2
bump kim-api to 2.1.3
2019-08-16 10:08:23 -06:00
8cfdf4fad5
Merge pull request #1632 from ellio167/kim-query-user-agent
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Add user-agent setting to kim_query curl command
2019-08-16 12:05:55 -04:00
72c5808cfe
Merge pull request #1633 from junghans/chain.x_install
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cmake: install chain.x as well
2019-08-16 12:05:33 -04:00
578bcf0fb0
Fixes normal force calculation bug in fix wall granular, allows twisting to be used without rolling in fix/wall/gran
2019-08-16 01:19:08 -06:00
edbd525bcb
cmake: install chain.x as well
2019-08-14 17:16:43 -06:00
259176c590
Add user-agent setting to kim_query curl command
2019-08-14 17:16:10 -06:00
e4e2342641
no need to include mpi.h in headers that include pointers.h (directly or indirectly)
2019-08-13 11:04:13 -04:00
47533bc526
Update fix_wall_region.txt
2019-08-13 00:31:03 +02:00
ff09c19149
documentation for fix_wall_region morse
2019-08-13 00:10:50 +02:00
915e0b30cf
Merge branch 'master' into feature-wall-region-morse
2019-08-12 23:01:01 +02:00
fa6cf0fa8f
reduce compiler warnings
2019-08-09 16:00:02 -04:00
42239bf480
update USER-MISC README
2019-08-09 15:51:49 -04:00
18725ce060
reformat documentation to match typical LAMMPS conventions, change links
2019-08-09 15:42:32 -04:00
5f442d7b64
add a couple of false positives
2019-08-09 15:31:22 -04:00
11f1ba220b
fix typo
2019-08-09 15:30:55 -04:00
a12b959f39
Merge pull request #1625 from ellio167/kim-logs
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Added logs for examples/kim
2019-08-09 13:47:41 -04:00
d90d2316d1
small tweak on include file list
2019-08-09 11:11:48 -04:00
838238b1ca
documentation
2019-08-08 00:38:41 +02:00
8619462b3b
Added logs for examples/kim
2019-08-07 16:14:22 -05:00
b084ad519d
Merge branch 'master' into feature-pair-cossq
2019-08-07 19:19:16 +02:00
131c5aadd2
Error/warning tweaks
2019-08-07 19:16:54 +02:00
