Commit Graph

41809 Commits

Author SHA1 Message Date
e38c13a764 add strcompress function and use it for error output 2025-01-17 22:59:44 -05:00
e350f28e26 refactor how error output is created and only print input and parsed line if they differ in text 2025-01-17 18:06:31 -05:00
9b443c9a4d add utility function to compare two string while ignoring whitespace 2025-01-17 14:06:30 -05:00
90416b63fc move misplaced break statement 2025-01-17 13:14:51 -05:00
ea9345444a Merge branch 'collected-small-fixes' of github.com:akohlmey/lammps into collected-small-fixes 2025-01-17 10:41:12 -05:00
b9dbfc6eb2 add support to flag failed arguments for calls to expand_args() 2025-01-17 10:40:34 -05:00
5a45ef6994 explain error message output for users 2025-01-17 10:35:34 -05:00
0cb64afc84 explain error message output for users 2025-01-17 09:13:55 -05:00
7c4649adbf update TODO list and changelog 2025-01-17 08:43:46 -05:00
a4cc00041c add notes about errors and warnings and log output 2025-01-17 05:13:25 -05:00
1e179b2432 address warnings reported by coverity scan 2025-01-17 05:12:40 -05:00
3b815c1bbe remove dead code 2025-01-16 22:02:11 -05:00
cf7695e99f add option to restart the LAMMPS instance to "Run" menu 2025-01-16 21:43:36 -05:00
1636a11054 fix minor issues 2025-01-16 21:22:41 -05:00
fa54fd1097 add option to suppress printing the last command 2025-01-16 21:11:27 -05:00
da5a12fcd1 increase visibility of highlighting the failed argument 2025-01-16 11:39:53 -05:00
6c16b1de74 must not set to unique if request is for skip list. only check for smallest pair cutoff. 2025-01-16 10:26:48 -05:00
f273116681 prevent the neighbor list re-ordering from getting stuck 2025-01-16 10:18:16 -05:00
82598ab3ca display error messages with fixed width font 2025-01-16 00:39:02 -05:00
00f23d4829 revert workarounds in compute rdf and adf now that the issue is fixed at the root 2025-01-16 00:38:31 -05:00
36dcb294b3 we need tighter checks, also on the smallest pairwise cutoff, before we can re-use a default neighbor list for an occasional list with an explicit cutoff 2025-01-16 00:23:47 -05:00
f60139d374 some more fixes to address coverity scan warnings. 2025-01-15 23:12:39 -05:00
8c93986e47 add overloads for Error::all() and Error::one() that can point out the location of a faulty argument 2025-01-15 23:12:11 -05:00
48f49837d8 fix some more minor memory issues flagged by coverity scan 2025-01-15 08:23:58 -05:00
4afdf493d7 integrate and adapt contents from PR #4028 by @alphataubio 2025-01-15 06:05:25 -05:00
2cbdaf8a6a fix some issues flagged by coverity scan 2025-01-14 22:23:24 -05:00
5f50278241 transfer workaround from compute rdf 2025-01-14 22:06:00 -05:00
781b40643c add deprecation warning for using accelerator offload with INTEL package 2025-01-14 20:49:00 -05:00
fbc66f75ac adjust epsilon (again) for macOS on ARM 2025-01-14 20:48:43 -05:00
5e90674fbe Merge commit 'ffa4765b154aea2027e438ac134f8d6ce742419a' into collected-small-fixes 2025-01-14 20:48:35 -05:00
ffa4765b15 Merge pull request #4241 from gsalkuin/develop
Add new fix to compute force and torque due to electric potential
2025-01-14 20:33:10 -05:00
89370efe39 Merge branch 'develop' into develop 2025-01-14 19:12:14 -05:00
906399b14f Merge pull request #3 from srtee/efield_lepton_updates
Efield lepton updates
2025-01-14 19:11:09 -05:00
bbb7d86614 Merge pull request #4410 from soniasalomoni/pair_d3
pair_style d3 - D3 dispersion corrections
2025-01-14 18:21:52 -05:00
0fe7fbdb42 Merge branch 'develop' into pair_d3 2025-01-14 16:05:29 -05:00
a4f02fbad3 handle the case when pair-wise cutoff varies and neighbor list is not sufficient 2025-01-14 10:04:16 -05:00
b27aa31baa fix whitespace 2025-01-14 22:35:56 +10:00
276b8d9c93 streamline Lepton variable update process with ptr-vectors 2025-01-14 22:31:42 +10:00
1f7533029b deduplicate force and torque calculations 2025-01-14 22:08:16 +10:00
af1f442b97 increment bugfix for "inputs local" 2025-01-14 07:06:37 -05:00
edb068c43f Merge pull request #4426 from akohlmey/update-to-fmtlib-11.1
Update embedded fmtlib copy to version 11.1
2025-01-14 01:24:57 -05:00
31d1addfad Merge pull request #4434 from akohlmey/collected-small-changes
Collected small changes and fixes
2025-01-14 00:41:10 -05:00
7b9f7be485 replace vecs with arrays since size known at compile-time; make phi and dphi flagging uniform 2025-01-14 14:47:33 +10:00
7c8c8c9d01 update patch for WHAM code 2025-01-13 22:07:44 -05:00
b56b8a016a Merge pull request #2 from akohlmey/efield_lepton_updates
Fix efield/lepton updates
2025-01-13 20:40:17 -05:00
c2868c448e Merge remote-tracking branch 'github/develop' into collected-small-changes 2025-01-13 20:34:14 -05:00
754517dcf6 Merge branch 'collected-small-changes' of github.com:akohlmey/lammps into collected-small-changes 2025-01-13 20:32:01 -05:00
6d7926a026 add missing lammps_expand() function 2025-01-13 19:13:34 -05:00
663f812799 fix inconsistent backquotes 2025-01-13 19:05:04 -05:00
55a3b28f7d replace CR-LF with LF 2025-01-13 16:19:40 -05:00