Commit Graph

28307 Commits

Author SHA1 Message Date
e56cc9be00 use initializer list instead of explicit constructor 2021-10-14 01:12:44 -04:00
27145d2789 catch up on refactoring default destructors that were missed previously 2021-10-14 01:12:04 -04:00
3ad75c40ec catch up on previous clang-tidy refactor for files that were skipped before 2021-10-13 23:59:43 -04:00
2fba6b44e4 use '= default' when default functions should be used 2021-10-13 23:59:05 -04:00
cc416b97f0 Merge pull request #2990 from akohlmey/clang-tidy-refactor
First chunk of semi-automated refactoring using clang-tidy
2021-10-13 22:51:25 -04:00
a1fb6902d5 Merge pull request #2992 from lammps/molswap
Add a new fix mol/swap command
2021-10-13 21:33:52 -04:00
c322064ff3 Merge pull request #2931 from stanmoore1/acks2_release
Add ACKS2 charge equilibration method to REAXFF and support for electric fields in qeq/reaxff
2021-10-13 20:27:57 -04:00
c5617dc006 fix spelling and make consistent 2021-10-13 19:25:09 -04:00
660bced187 whitespace, pointer initializer, and permission fixes 2021-10-13 19:17:42 -04:00
69a3b5b215 move common init() code into base class. warn when used with fix efield 2021-10-13 18:54:10 -04:00
a922c91c1a document restrictions to using ReaxFF charge equilibration with fix efield 2021-10-13 18:53:09 -04:00
06ef216e61 protect against using multiple fix efield instances. improve error messages. 2021-10-13 18:26:09 -04:00
c8dc6c5010 whitespace 2021-10-13 18:25:13 -04:00
547b9850b9 tiny optimization 2021-10-13 18:18:58 -04:00
56ce880b32 update force-style test data with corrected efield strength computation 2021-10-13 18:06:49 -04:00
f206eab338 mv examples/gcmc to mc, add 2 scripts for fix mol/swap 2021-10-13 15:02:33 -06:00
74219585f3 Update log files 2021-10-13 14:03:50 -06:00
9cfb822847 Merge branch 'master' of github.com:lammps/lammps into acks2_release 2021-10-13 13:37:04 -06:00
727a028a6f Add inputs with field 2021-10-13 13:08:08 -06:00
67673a6055 Fix negative sign in chi_field 2021-10-13 12:30:19 -06:00
552d960b39 Fix double space 2021-10-13 10:43:26 -06:00
165708adeb use nullptr in unittest tree 2021-10-12 22:52:50 -04:00
643a7a1acb replace std::random_shuffle() with std::shuffle() to be compatible with C++17 and beyond 2021-10-12 22:39:30 -04:00
88631372ec use nullptr instead of NULL or 0 where applicable 2021-10-12 21:47:02 -04:00
dd6f49a753 use 'noexcept' instead of the deprecated 'throw()' 2021-10-12 21:29:33 -04:00
7b6a3c4307 remove redundant void arguments 2021-10-12 21:17:46 -04:00
1002763df3 remove default class members except for the assignment copy constructor 2021-10-12 21:17:00 -04:00
26cd988672 Merge pull request #2989 from rbberger/unittest_bugfixes
Avoid file name collisions in dump unit tests
2021-10-12 14:41:25 -04:00
a8f42bd534 tweak to atom/swap doc page 2021-10-12 11:50:04 -06:00
c22dae8d2c add a new fix 2021-10-12 11:48:26 -06:00
113c53a5da doc page for new fix mol/swap 2021-10-12 11:45:50 -06:00
0bc6373386 Merge pull request #2983 from akohlmey/collected-small-changes
Collected small changes and bugfixes
2021-10-12 13:26:50 -04:00
a1ff9e35b7 Avoid file name collisions in dump unit tests 2021-10-12 12:15:19 -04:00
0a98ff3c38 add more features to mol/swap, sync with atom/swap 2021-10-12 09:56:51 -06:00
2651e4650f use the new name of the main branch 2021-10-11 23:23:24 -04:00
9cf6b927cb Merge branch 'master' into collected-small-changes
# Conflicts:
#	src/REAXFF/fix_reaxff_species.cpp
2021-10-11 21:24:11 -04:00
96a45224de whitespace 2021-10-11 21:10:14 -04:00
27c9ba465b avoid duplication of Accelerator package info in additional doc pages 2021-10-11 16:49:59 -06:00
eedd953258 remove debug logic 2021-10-11 16:20:19 -06:00
cb77555fa6 update title in reference to accelerator section 2021-10-11 17:26:24 -04:00
7bed85ef19 add debug statements 2021-10-11 15:00:20 -06:00
e79930dfb9 add check to prohibit using fix efield component in periodic direction with reaxff 2021-10-11 16:48:38 -04:00
4faca6531a fix typo 2021-10-11 16:35:54 -04:00
a45dbb6510 no need for static string buffers anymore 2021-10-11 16:35:42 -04:00
1f4c50037b Merge branch 'master' into acks2_release 2021-10-11 16:13:20 -04:00
a6cde11896 Merge pull request #2985 from stanmoore1/kk_issues
Fix issues with Kokkos package
2021-10-11 15:27:58 -04:00
2290ade2f2 ensure that fix efield is initialized before accessing its data. 2021-10-11 15:06:24 -04:00
6d2b32f0b2 move chi field calculation to fix qeq/reaxff 2021-10-11 14:35:23 -04:00
2ea4c71125 Merge pull request #2979 from akohlmey/platform-namespace
Implement a "platform" sub-namespace with platform specific functions and wrappers
2021-10-11 13:41:15 -04:00
70cbb72e42 Merge branch 'master' into acks2_release 2021-10-11 09:58:44 -04:00