Commit Graph

7403 Commits

Author SHA1 Message Date
a1e8992eac replace non-ASCII characters 2018-11-06 22:21:19 -05:00
84fcf01bed bond/react: allow custom update of charges near template edges
also, fixes a bug introduced in PR #1189, when not using stabilization
2018-11-06 19:59:22 -07:00
4e6253254c Merge branch 'master' into user-cgdna 2018-11-06 19:48:06 +00:00
562296bdb7 Updated link to preprint article 2018-11-06 19:44:35 +00:00
91c4ef6f64 Merge pull request #1189 from jrgissing/bond/react-custom_group
Bond/react custom group support
2018-11-06 10:32:06 -05:00
29ae88e309 Update docs for KIM 2018-11-05 09:37:35 -06:00
ab7aa9dfda correction to fix group property doc 2018-11-05 00:49:33 -07:00
f7aa01d74a bond/react: convert group-ID to group-ID-prefix
enables consistent syntax when using custom groups
2018-11-03 11:57:46 -06:00
b7e507a258 fix typo and reformat 2018-11-02 21:08:45 -04:00
ea9746f26d insert fix plumed docs into manual generation 2018-11-02 21:08:32 -04:00
85a5cab663 Update Colvars library to version 2018-10-16 2018-11-02 17:45:20 -04:00
b1c50e3bbe Added plumed documentation in a txt file 2018-11-02 19:50:49 +00:00
b0938b70d5 Merge branch 'master' into kim-v2-update 2018-11-01 19:41:13 -05:00
b67e54dd7d reciprocal 'related commands' 2018-11-01 01:09:52 -06:00
5821a5ecc8 bond/react: custom group with stabilization option 2018-11-01 01:04:45 -06:00
3faecc4d28 add option to update all atoms' atomic charges
option to update all atomic charges, even when edge atoms are defined
2018-10-30 22:11:52 -06:00
1b98c0e40d Merge remote-tracking branch 'lammps/master' into kim-v2-update 2018-10-30 18:40:55 -05:00
ba6f6f73f1 first commit: added SDPD 2018-10-30 17:40:00 +03:30
a2671f8943 doc files for new parallel dump file read capability 2018-10-26 18:06:34 -06:00
4fa78a78de Added instructions on PLUMED to build extras and Package details pages of manual 2018-10-26 22:12:17 +01:00
ff9f836be4 Merge remote-tracking branch 'upstream/master' 2018-10-26 22:01:05 +01:00
2c1f420a48 more tweaks 2018-10-24 13:43:26 -06:00
07f92d225e formatting tweak 2018-10-24 12:03:51 -06:00
7e5ec96bcd more tweaks from style check script 2018-10-24 12:02:36 -06:00
c8870f1b78 change intro to each list of commands 2018-10-24 11:57:34 -06:00
7069b52a44 Merge pull request #1172 from akohlmey/next-patch-release
Patch release 24 October 2018
2018-10-23 18:08:38 -04:00
fccc26758b Merge pull request #1152 from lammps/doc-adjust2
More Documentation consistency improvements
2018-10-23 13:05:04 -04:00
0293dee9b2 patch 24Oct2018 2018-10-23 11:03:51 -04:00
43f83abe5e Changes to the NH fix enabling Cauchy stress control (Cauhchystat) due to Miller, Tadmor, Gibson, Bernstein and Pavia, J Chem Phys,
144, 184107 (2016).
2018-10-23 10:41:50 -04:00
6107f00e9d Merge pull request #1164 from akohlmey/fix-halt-for-minimize
Enable use of fix halt for minimizations
2018-10-23 10:35:26 -04:00
aa27c8f733 convert double quotes to latex style 2018-10-23 09:17:00 -04:00
8649081904 fix broken links in manual 2018-10-21 18:39:25 -04:00
8223f5e0a3 Eliminated another initialization error and tweaked rdf-adf example 2018-10-20 16:46:45 -06:00
fb6f019a11 correct link to output options 2018-10-20 06:45:57 -04:00
79da210dc4 integrate compute adf into manual build infrastructure 2018-10-20 06:45:28 -04:00
0783f8ad2f Added compute_rdf.txt 2018-10-19 18:43:58 -06:00
04a4a29fcf Creatd new compute ADF for angular distribution function 2018-10-19 18:36:11 -06:00
1c994bda46 corrections to fix neb doc page 2018-10-19 09:53:19 -06:00
f5206d2f7b more one-liner in pair_style doc page 2018-10-19 09:53:19 -06:00
9bca5ae607 added one-line pair descriptions 2018-10-19 09:53:19 -06:00
d1f260a765 undo changes to PRD doc from another branch 2018-10-19 09:53:19 -06:00
36a1ca7e72 updates some one-line style defs 2018-10-19 09:53:19 -06:00
5f1c77ced2 tweaks to USER-PTM package doc 2018-10-19 09:53:18 -06:00
dc89bdd924 more changes augmenting lists with USER styles and to core/shell doc pages 2018-10-19 09:53:18 -06:00
a979c6eeec updating files that have lists of command styles 2018-10-19 09:53:18 -06:00
cc6f1be82d first attempt to port fix halt to minimizations 2018-10-19 07:26:49 -04:00
d9dd80b368 added -restart2dump command-line option 2018-10-18 14:24:48 -06:00
382e91cf5b Merge pull request #1156 from wmbrownIntel/user-intel-hybrid
Adding hybrid support to USER-INTEL package + EAM/intel bug fix
2018-10-12 12:35:36 -04:00
c37deebffa Adding full hybrid support to USER-INTEL package and fixing bug with EAM parameter initialization. 2018-10-11 05:12:00 -07:00
3d0722b974 Merge branch 'master' of github.com:lammps/lammps into granular-kokkos 2018-10-10 10:43:54 -06:00