Commit Graph

7403 Commits

Author SHA1 Message Date
c3ece2f086 typo in fix relax/box doc page 2018-09-11 12:44:35 -06:00
7f328d3f79 cite a good book on SLLOD thermostatting for molecular systems 2018-09-11 11:49:46 -06:00
983e8bb110 doc page clarifications 2018-09-11 11:36:37 -06:00
02b653c0ce correct end of itemized list to be compatible with txt2rst conversion 2018-09-10 22:22:42 -04:00
075d366051 Merge pull request #1116 from akohlmey/correct-doc-build
Correct multiple issues in manual build
2018-09-09 01:28:29 -04:00
b488f1072e recent package links 2018-09-07 14:22:38 -06:00
0384ef8967 more tweaks to client/server doc pages 2018-09-07 14:00:39 -06:00
25907c856e small doc page changes, format and content on doc page tarballs 2018-09-07 09:56:03 -06:00
dd64c063cf various fixes for the manual to address breakage from merging MESSAGE and USER-SCAFACOS packages 2018-09-06 22:28:20 -04:00
947f574503 Merge branch 'master' into compute_mop
# Conflicts:
#	cmake/CMakeLists.txt
2018-09-06 21:13:42 -04:00
95c3d2fc8e Merge pull request #1051 from stanmoore1/data_dup
Add data duplication option to the KOKKOS package
2018-09-05 17:09:09 -06:00
510e09f4ef patch 5Sep18 2018-09-05 13:39:18 -04:00
0c92c22755 moved contents of USER-MOP package to USER-MISC as suggested by @sjplimp 2018-09-05 10:56:12 -04:00
ff2e13e063 Merge branch 'master' into ScaFaCoS 2018-09-04 21:35:46 -04:00
bcecc0389e add variable option to compute bond/angle/dihedral local 2018-09-04 14:48:44 -06:00
f120b18db8 Changes to the NH fix enabling Cauchy stress control (Cauhchystat) due to Miller, Tadmor, Gibson, Bernstein and Pavia, J Chem Phys,
144, 184107 (2016).
2018-09-04 15:28:57 -04:00
cb4ffaf95c update docs and references for name changes in USER-MOP package, remove obsoleted files 2018-09-04 08:42:32 -04:00
a797a0d193 changed computes names to stress/mop and stress/mop/profile 2018-09-04 14:02:19 +02:00
7b423c6d4b integrate USER-MOP package into build and documentat system. apply latest LAMMPS programming style conventions 2018-09-03 23:37:25 -04:00
5f0423b97d change -mpi to -mpicolor 2018-08-31 17:04:27 -06:00
78301e5e93 Merge branch 'master' into cslib 2018-08-31 16:30:28 -06:00
bc62002b1c units and doc changes 2018-08-31 16:05:24 -06:00
e3ce702eec doc adjust 2018-08-31 13:53:02 -06:00
c4c5f9a32e 2 new computes: chunk/spread/atom and reduce/chunk 2018-08-31 13:44:49 -06:00
8f5512eafe patch 31Aug18 2018-08-31 09:49:35 -06:00
c61f9248f4 Merge pull request #987 from sergeylishchuk/master
Added Axilrod-Teller manybody potential
2018-08-29 07:48:22 -06:00
796b6b2d9c Merge branch 'master' into kim-v2-update 2018-08-24 14:28:33 -05:00
d8b087aeb4 docs for MD protocol enhancements 2018-08-24 11:11:34 -06:00
33d5fe457c re-merge with current master 2018-08-24 09:57:08 -06:00
44bda245a6 resolution of cutoff issues 2018-08-24 09:36:39 -06:00
a04008cdfd fully integrate atm pair style into manual 2018-08-23 10:27:40 -04:00
648d8c3d2a adapt docs to refactored manual 2018-08-23 10:15:17 -04:00
c5d3274222 restore files 2018-08-23 10:13:06 -04:00
4f36f077ff whitespace cleanup 2018-08-23 10:08:36 -04:00
929185da07 Merge branch 'master' into axilrod-teller
# Conflicts:
#	cmake/CMakeLists.txt
#	doc/src/Commands.txt
#	doc/src/Commands_bond.txt
#	doc/src/Howto.txt
#	doc/src/Howto_bioFF.txt
#	doc/src/Howto_coreshell.txt
#	doc/src/Howto_couple.txt
#	doc/src/Howto_diffusion.txt
#	doc/src/Howto_dispersion.txt
#	doc/src/Howto_granular.txt
#	doc/src/Howto_library.txt
#	doc/src/Howto_multiple.txt
#	doc/src/Howto_replica.txt
#	doc/src/Howto_restart.txt
#	doc/src/Howto_temperature.txt
#	doc/src/Howto_tip4p.txt
#	doc/src/Intro.txt
#	doc/src/Intro_authors.txt
#	doc/src/Intro_features.txt
#	doc/src/Intro_nonfeatures.txt
#	doc/src/Manual.txt
#	doc/src/Manual_version.txt
#	doc/src/Packages.txt
#	doc/src/Packages_details.txt
#	doc/src/Packages_standard.txt
#	doc/src/Packages_user.txt
#	doc/src/Section_start.txt
#	doc/src/Speed.txt
#	doc/src/Speed_compare.txt
#	doc/src/Speed_gpu.txt
#	doc/src/Speed_intel.txt
#	doc/src/Speed_kokkos.txt
#	doc/src/Speed_measure.txt
#	doc/src/Speed_omp.txt
#	doc/src/Speed_opt.txt
#	doc/src/Speed_packages.txt
#	doc/src/Speed_tips.txt
#	doc/src/fix_deform.txt
#	doc/src/fix_external.txt
#	doc/src/fix_property_atom.txt
#	doc/src/lammps.book
#	doc/src/neb.txt
#	doc/src/pair_eam.txt
#	doc/src/prd.txt
#	doc/src/run_style.txt
#	doc/src/temper.txt
#	src/version.h
2018-08-23 10:06:47 -04:00
440338d769 last round of spelling fixes 2018-08-22 22:35:35 -04:00
af35c3bcca atomID -> atom-ID 2018-08-22 22:28:53 -04:00
b00046fd34 fix typo 2018-08-22 22:18:27 -04:00
4b2629d8ba recompile/recompute/reinit -> re-compile/re-compute/re-init 2018-08-22 22:18:16 -04:00
193f46dd9f spelling fix 2018-08-22 22:04:03 -04:00
96bde51ae4 autodetect -> auto-detect 2018-08-22 22:03:53 -04:00
683c87347c neighborlist -> neighbor list 2018-08-22 22:02:24 -04:00
fe6debfe9a precompiled -> pre-compiled 2018-08-22 22:02:01 -04:00
9a8c09288f use Hyper-Threading consistently 2018-08-22 21:54:41 -04:00
eca0487daf subdomain -> sub-domain 2018-08-22 21:50:56 -04:00
4278a284e4 fix one more broken link 2018-08-22 21:48:42 -04:00
e632acec29 fix a bunch more spelling errors 2018-08-22 21:30:21 -04:00
1bd5626140 fix some more spelling issues 2018-08-22 20:43:35 -04:00
9e37ea16ac fix some speelink ehrrors 2018-08-22 20:35:35 -04:00
0e292b397f even more broken links detected by ePUB to MOBI conversion 2018-08-22 19:41:44 -04:00