e4ff8128f1
fix typo
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(cherry picked from commit c65fb0e311
2016-10-16 12:29:53 -04:00
2c8a7a318a
bug fix for fix GCMC w/ fix shake, enhance of fix wall/gran/region with restarting
2016-10-13 16:55:53 -06:00
63e71cd45b
patch to add DPD-VV
2016-10-12 07:35:47 -06:00
39a22039e9
correct broken link
2016-10-11 23:57:40 -04:00
e10ea91c5f
add doc file to toctree
2016-10-11 23:51:42 -04:00
b75860048b
updates for recent changes to the manual
2016-10-11 23:50:45 -04:00
69cb831705
import dump nc and dump nc/mpiio from lammps-netcdf as USER-NC-DUMP package by lars pastewka
2016-10-11 23:44:34 -04:00
0eb7fbf34d
tweaks to new USER-DPD docs
2016-10-11 15:43:59 -06:00
6f1162927a
Merge pull request #207 from timattox/USER-DPD_new_VV_for_DPD
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USER-DPD: add support for using VV with DPD
2016-10-11 13:39:25 -06:00
04f5eadcf1
added LAST option to dump_modify thresh, more restart info printed out to screen
2016-10-11 12:39:52 -06:00
e70d530c46
Merge pull request #203 from rbberger/txt2rst-external-link-fix
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txt2rst external link fix
2016-10-10 13:59:27 -06:00
144e6a8091
whitespace cleanup
2016-10-10 09:40:09 -04:00
72ac073412
edited documentation
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(cherry picked from commit eff14c74b0
2016-10-10 09:38:54 -04:00
49c45ab03b
edited documentation
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(cherry picked from commit fd560889c3
2016-10-10 09:38:53 -04:00
c2cd439944
first draft of documentation for respa
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(cherry picked from commit d7dcbcfbd9
2016-10-10 09:38:53 -04:00
e27ed6c94a
USER-DPD: Added support to use VV integrator with USER-DPD if desired.
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Includes documentation and examples.
NOTE: VV requires very small timesteps under isoenergetic conditions.
Consider using fix_shardlow instead, since this VV support is
primarily for comparison purposes.
2016-10-07 15:03:30 -04:00
7f3a7c5cbe
Fix broken link
2016-10-06 20:33:24 -04:00
e9fed80928
Merge pull request #202 from akohlmey/doc-formatting-fixes
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collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:49:44 -06:00
b3d2fb91bb
new fix wall/gran/region command, REBO bug fix, new example log files
2016-10-06 15:47:41 -06:00
0b5d71537a
collected documentation updates and corrections from LAMMPS-ICMS
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fixes formatting issues due to tabs, permission issues and
a few typos and badly worded text.
2016-10-06 15:48:18 -04:00
493873fb93
clean up doc src
2016-10-06 13:00:46 -06:00
c46be7db62
changes to imbalance weight factors
2016-10-05 10:33:39 -06:00
11c2892e54
Merge branch 'restrict-weights-and-weight-factors' of https://github.com/akohlmey/lammps
2016-10-04 09:49:09 -06:00
e079362776
Merge pull request #190 from akohlmey/small-bufixes-and-enhancements
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Small bufixes and enhancements
2016-10-03 17:58:36 -06:00
c3ff8812b3
added XOR operator to variable command
2016-10-03 17:57:33 -06:00
1985db4fb1
correct designation of meam supporting USER-OMP and meam/spline not
2016-10-01 23:05:05 -04:00
d45e333f7c
restrict choice of weight factors and guarantee that weights are >= 0.001
2016-09-30 11:11:32 -04:00
6d200061ca
update colvars library to version 2016-09-30
2016-09-30 08:15:44 -04:00
189825489c
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15673 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-28 22:32:14 +00:00
45e50b46c3
sync with GH
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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15668 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-27 21:37:17 +00:00
f82e0c53b6
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15666 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-27 21:31:04 +00:00
6fedf8d899
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15662 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-27 21:18:32 +00:00
2ae966c26f
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15657 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-27 16:49:51 +00:00
b68e954761
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15650 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-27 15:06:58 +00:00
5769c10189
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15643 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-26 14:39:43 +00:00
50d59454d2
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15640 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-23 23:06:49 +00:00
24ff008a0f
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15639 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-23 23:06:44 +00:00
f718c54430
sync with GH
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git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15634 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-23 21:04:56 +00:00
31e41707e0
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15632 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-22 15:46:03 +00:00
c22df8db57
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15630 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-22 14:05:57 +00:00
d0bbf3fb97
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15629 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-22 02:22:08 +00:00
6dd4480482
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15626 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-21 22:31:49 +00:00
ca5ad04b01
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15624 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-21 22:15:17 +00:00
c382759406
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15620 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-21 21:25:55 +00:00
0bcd90195d
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15616 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-21 20:38:57 +00:00
fe73c3e4e3
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15610 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-20 17:25:49 +00:00
8944d48bd1
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15608 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-20 16:36:15 +00:00
4f941abdfd
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15601 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-20 16:19:25 +00:00
af4a42345f
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15600 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-20 16:14:15 +00:00
df0ed58bbd
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15599 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-20 16:12:56 +00:00
