Commit Graph

7403 Commits

Author SHA1 Message Date
6689a20754 clarify 2022-07-16 10:26:57 -04:00
34aca71258 disallow use of variable functions vdisplace(), swiggle(), and cwiggle() with fix dt/reset 2022-07-16 10:26:56 -04:00
9e1685211b allow ramp(x,y) to be used in between runs (returning x) and avoid division by zero on run 0 2022-07-16 10:26:56 -04:00
beebaea160 Merge pull request #3350 from lammps/doc-page-dump-style-table
add a table with list of dump styles
2022-07-16 06:45:04 -04:00
db9731bf3b also index dump styles 2022-07-15 22:58:49 -04:00
b28f8bc70e add missing index entries for dump style 2022-07-15 21:23:26 -04:00
f478ca3b4d Merge pull request #3337 from vpalkar/pair-srp-react
Adding pair style srp/react
2022-07-15 18:59:49 -04:00
c8ca8fb2d6 properly integrate the new file into the document toctree 2022-07-15 17:51:36 -04:00
f36653caeb add a table with list of dump styles 2022-07-15 14:47:45 -06:00
3761cff688 Merge pull request #3331 from jrgissing/bond/react-bugfixes
Bond/react bugfixes
2022-07-15 16:18:30 -04:00
a393569083 Merge pull request #3343 from yskmiyazaki/style-sdk-update
Change package name CG-SDK to CG-SPICA and add a function type LJ12-5 to the package
2022-07-15 14:54:41 -04:00
70eec9a55c Merge pull request #3339 from jtclemm/patch_contact_atom
Redoing groups in compute contact/atom
2022-07-15 14:47:03 -04:00
897d9de2ed whitespace 2022-07-15 12:16:15 -04:00
597e3b7729 use array output for fix electrode instead of fix_modify 2022-07-15 10:28:35 +02:00
e41976e17e Update Errors_warnings.rst 2022-07-13 11:51:50 -04:00
b55cf30cb8 Update Errors_messages.rst 2022-07-13 11:39:30 -04:00
62d0277f34 Merge pull request #3341 from stanmoore1/hybrid_cutoffs
Add pair_modify option to allow separate cutoffs for each neigh list …
2022-07-13 10:51:55 -04:00
4a747fa40c Merge branch 'develop' into amoeba 2022-07-13 03:14:39 -04:00
5087ae19c8 cross-reference neighbor multi and point out differences and benefits 2022-07-13 03:11:40 -04:00
bc79fc6fa3 Clarify docs 2022-07-12 08:26:39 -06:00
a37121d425 Merge pull request #3344 from akohlmey/read_dump_no_timestep
Add option to read_dump that prevents resetting the timestep
2022-07-11 19:02:46 -04:00
6ffde544e1 Change default 2022-07-11 10:23:55 -06:00
1bdaf9c99f Small tweak to clarify doc page 2022-07-11 10:22:08 -06:00
aa11935e88 updated .gitignore and Purge.list, and author info, and added URL to the SPICA web. 2022-07-11 11:38:31 +09:00
bf6ad1bb45 add option to read_dump that prevents resetting the timestep 2022-07-10 05:00:03 -04:00
1ba2b56745 Merge pull request #3342 from rohskopf/compute-snap-apt-2
Extract bispectrum gradients in compute_snap without summing over neighbors.
2022-07-09 16:28:37 -04:00
ee8fa35355 fix typo 2022-07-09 16:07:55 -04:00
6e34856c77 Merge branch 'develop' into feature_pace-al 2022-07-09 15:14:20 -04:00
796bc28f94 changed rstfile names, style names, and description about FF for SPICA 2022-07-08 16:54:01 +09:00
ae615eb815 More whitespace in docs 2022-07-07 16:53:20 -06:00
de274cddef Add pair_modify option to allow separate cutoffs for each neigh list with pair hybrid/overlay 2022-07-07 16:48:03 -06:00
3b41ec7d9b uniformly rename pair_style, compute and dump to pace/extrapolation
add doc
2022-07-07 23:28:12 +02:00
7d06ee9aa7 Merge pull request #3298 from jrgissing/reaxff_species_delete_keyword
Reaxff species 'delete' keyword
2022-07-07 16:37:43 -04:00
b47e5a8d5b Finalized doc page 2022-07-07 13:36:22 -06:00
c838c9da6f Cleaned up language 2022-07-07 11:43:39 -06:00
9975eecd2a Fix merge conflicts 2022-07-07 09:11:28 -06:00
6b22886064 small docs fixes 2022-07-07 10:39:11 -04:00
4aa0132860 cosmetic 2022-07-07 10:35:34 -04:00
569136e160 Redoing groups in compute contact/atom 2022-07-06 14:35:16 -06:00
b7457fe834 Initial commit for pair style srp-react files 2022-07-06 10:55:14 -04:00
1599afc623 clarify how reaxff/species decides when to reneighbor 2022-07-06 00:45:36 -04:00
5331fa7a58 fix documentation issues (spelling, references, non-ASCII chars) 2022-07-04 19:09:56 -04:00
de08609634 add join_words() utility function 2022-07-04 18:26:59 -04:00
e4c798674f Merge branch 'develop' into amoeba-ak 2022-07-02 22:02:07 -04:00
57a569eb3b Merge remote-tracking branch 'github/amoeba' into amoeba-ak 2022-07-02 21:58:15 -04:00
6f3f1dba6e more documentation tweaks 2022-07-02 19:05:58 -04:00
f38a417a32 restore user facing keyword back to "threebody" defaulting to "on"
also some minor updates:
- streamline description in the documentation, add links/references
- print message when disabling threebody terms
- improve error messages, simplify argument processing
2022-07-02 17:08:22 -04:00
f826d175f0 Merge branch 'develop' into jkelowitt/develop 2022-07-02 12:13:57 -04:00
8e4b3fd41b Merge pull request #3328 from stanmoore1/kk_meam_release
Add Kokkos version of pair MEAM
2022-07-02 03:51:51 -04:00
581503888f Updated docs. 2022-07-01 21:07:19 -06:00