Commit Graph

7403 Commits

Author SHA1 Message Date
a42d632aed Merge branch 'develop' into colvars-update 2024-08-05 21:38:57 -04:00
843e678a78 Merge pull request #4255 from akohlmey/collected-small-changes
Collected small changes and fixes
2024-08-05 20:53:15 -04:00
d9e0847c3b update read_restart docs about timestep info 2024-08-05 19:27:36 -04:00
133dee9ac1 Update Colvars library to version 2024-06-04 2024-08-06 01:07:43 +02:00
278accd9ea Update FixColvars to expand usage of fix_modify commands
See https://github.com/Colvars/colvars/pull/418

Also moving inthash code to a separate file to simplify future refactoring
2024-08-06 01:05:51 +02:00
e599663b2b Update dump_image.rst 2024-08-05 18:11:53 -04:00
f20aa6271c also support bcolor, bdiam
(type label support)
2024-08-04 19:35:02 -04:00
a0f4da37e9 docs for type label support 2024-08-04 19:09:18 -04:00
66621a99fd update docs for LAMMPS-GUI to include recent additions 2024-08-04 18:48:35 -04:00
1d1b448e18 update Linux installation docs to describe flatpak installation 2024-08-04 06:34:07 -04:00
7c9703b416 update LAMMPS-GUI docs for changing the default of "Reformat on 'Enter'" 2024-08-03 09:16:34 -04:00
332157fa9b fix typo 2024-08-02 15:40:40 -04:00
75061d4b9d docs: expand author list 2024-08-02 12:54:03 -06:00
b5460061be more details about running CLI utils in the flatpak bundle 2024-08-02 11:50:15 -04:00
e73e522e40 update docs for installing LAMMPS-GUI 2024-08-02 10:19:42 -04:00
7a3ba6027b add option to skip death tests for use with valgrind checking of unit tests 2024-08-01 17:38:12 -04:00
cb00839357 Merge branch 'develop' into plumed-plugin 2024-07-30 20:30:21 -04:00
75b09ed143 discuss in more detail MPI support in PyLammps. Some small improvements in MPI support
MPI related changes are:
 - Raise exception in PyLammps.eval() if called from MPI rank
 - Print (some) informational and warning messages only from MPI rank 0
2024-07-30 11:27:31 -04:00
bd2e071ef0 clarify that hybrid styles also do not write coeff data to data files 2024-07-30 08:59:51 -04:00
208216ba3d Merge branch 'kokkos-amd-gfx1103-support' into collected-small-fixes 2024-07-30 08:46:22 -04:00
0ea45d89d9 clarify that all hybrid styles do not write Coeff sections 2024-07-30 05:45:24 -04:00
60d118a41a update to current list of compression tools 2024-07-29 20:13:27 -04:00
1d5aa19e4f document on-the-fly decompression for file viewer 2024-07-29 20:13:09 -04:00
e1f17cec7d update list of supported devices 2024-07-29 17:11:51 -04:00
2f2412bd95 correctly use versionchanged command 2024-07-29 15:24:05 -04:00
6bb89f6a14 Merge branch 'develop' into collected-small-fixes 2024-07-29 15:17:55 -04:00
04f7aaca26 Merge pull request #4243 from jtclemm/sph-update
Cleaning up and fixing bug in SPH package
2024-07-29 15:16:48 -04:00
4d8e03e2ae document recenter option 2024-07-29 00:16:31 -04:00
ffdf499cb1 fix typo 2024-07-28 11:24:46 -04:00
3654f822f3 Merge remote-tracking branch 'github/develop' into collected-small-fixes 2024-07-28 03:31:08 -04:00
122e9176e7 Merge pull request #4240 from akohlmey/more-typelabel-support
Add some more typelabel support
2024-07-28 03:30:36 -04:00
a3775f785a add some installation info 2024-07-27 08:55:02 -04:00
6eb6d972e9 more doc tweaks 2024-07-27 04:38:20 -04:00
8b0aaa814e small tweak to refer to LAMMPS-GUI more consistently 2024-07-27 00:19:21 -04:00
06563b8255 Merge remote-tracking branch 'github/develop' into collected-small-fixes 2024-07-26 22:48:26 -04:00
08fdad12e8 fix typo and rewrap 2024-07-26 19:47:10 -04:00
a972a282a7 Adding remap v restriction to doc files 2024-07-26 17:43:04 -06:00
e7d338573f Merge branch 'develop' into spica-kk 2024-07-26 19:10:46 -04:00
ca25071353 include generic accelerated style blurb 2024-07-26 18:33:07 -04:00
06767886de Merge branch 'develop' into collected-small-fixes 2024-07-26 18:32:49 -04:00
343d600410 make docs consistent with rest of manual and rephrase fix shake changes 2024-07-26 17:23:46 -04:00
e28de32a77 update docs, kk accel style 2024-07-26 13:06:17 -06:00
a2f461c688 fix cut-n-paste doc issue 2024-07-26 10:35:07 -04:00
c0c69af709 update LAMMPS-GUI howto docs 2024-07-26 10:19:15 -04:00
c8818a16c5 Add menu entries to open LAMMPS tutorial website 2024-07-25 22:14:06 -04:00
df4ae41283 update docs for added typelabel support 2024-07-25 21:25:14 -04:00
1e41dfaeb9 Adding movie references to BPM/RHEO 2024-07-25 15:18:45 -06:00
590c7dcf8f Merge branch 'lammps:develop' into spica-kk 2024-07-25 13:54:44 -04:00
90291a9b3a Merge pull request #4237 from Yi-FanLi/pimd_langevin_lj
fix pimd/langevin: improve usage of lj reduced units
2024-07-24 18:58:12 -04:00
992b279b3a Merge branch 'develop' into pimd_langevin_lj 2024-07-23 21:34:30 -04:00