Commit Graph

27359 Commits

Author SHA1 Message Date
ed34856961 Merge pull request #2854 from akohlmey/final-fixes-for-patch-release
Final fixes for the patch release
2021-07-27 20:31:52 -04:00
8e6b7bf6e5 Merge pull request #2853 from stanmoore1/kk_verlet
Fix bug in verlet_kokkos.cpp with GRANULAR package
2021-07-27 18:59:20 -04:00
bb5da016d4 add dependencies for KOKKOS style to the conventional build 2021-07-27 18:21:45 -04:00
269690b771 document hard package dependencies 2021-07-27 18:21:22 -04:00
fe34fe26b2 add a hard dependency on EXTRA-PAIR to the DIELECTRIC package 2021-07-27 18:21:08 -04:00
416048e939 Fix compile error 2021-07-27 15:57:06 -06:00
f20479f10e Fix typo 2021-07-27 15:47:42 -06:00
e47bd5c490 Merge branch 'master' of github.com:lammps/lammps into kk_verlet 2021-07-27 14:28:54 -06:00
c4eee478b1 move back to src for dependencies 2021-07-27 15:53:35 -04:00
de4322b54c whitespace fixes 2021-07-27 14:32:04 -04:00
3ff096e517 Merge pull request #2848 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2021-07-27 14:24:12 -04:00
b1331f52a5 Merge pull request #2849 from wmbrownIntel/intel-omp-simd
Convert Intel package simd vectorization directives to OpenMP standard
2021-07-27 13:37:58 -04:00
dbe14d9ee7 Add missing method to Kokkos verlet 2021-07-27 11:22:20 -06:00
d292da78ca address CodeQL warnings and reformat with clang-format 2021-07-27 12:29:44 -04:00
f7f85822a9 move some more computes from EXTRA-COMPUTE back to src because of dependencies 2021-07-27 12:07:27 -04:00
8838fbc1c3 Merge pull request #2850 from akohlmey/lammps-gather-bonds
Implement lammps_gather_bonds() into the C-library interface and the Python module
2021-07-27 11:30:19 -04:00
ec069595f7 move compute orientorder/atom because compute coord/atom depends on it 2021-07-27 11:16:40 -04:00
2d488bab6b Merge branch 'master' into collected-small-changes 2021-07-27 11:15:00 -04:00
dab884fd1f Merge pull request #2829 from akohlmey/package-reorganization2
Package reorganization (step 2)
2021-07-27 10:55:32 -04:00
f39c5178d8 update plumed to version 2.7.2 and drop workaround for 2.7.1 2021-07-27 09:56:52 -04:00
16fae72670 small tweak for MinGW-64 compilation on Fedora 34 2021-07-27 08:44:59 -04:00
a4ffffad33 update some version strings for library and python APIs 2021-07-26 23:10:24 -04:00
458253b452 add python interface with optional numpy support for lammps_gather_bonds()
unit tests are included
2021-07-26 22:40:21 -04:00
cc87e7eee3 add unit test for c-library interface function lammps_gather_bonds() 2021-07-26 20:59:14 -04:00
829bc8a617 update equation for updated NEB code 2021-07-26 18:45:37 -04:00
fdc75dcf35 add lammps_gather_bonds() function to the C library interface 2021-07-26 18:32:06 -04:00
f34f6b2a27 Merge branch 'master' of https://github.com/wmbrownIntel/lammps into intel-omp-simd 2021-07-26 12:10:37 -07:00
af359df042 Allowing nofdotr for Intel package with newton off. 2021-07-26 12:04:31 -07:00
fefcd0e2af Converting cilk vectorization directives to the openmp standard and changing some more depracated vector intrinsics. Data alignment directives for compiler vectorization are still mostly intel specific. 2021-07-26 11:22:21 -07:00
cca17feb27 silence compiler warnings, remove dead code 2021-07-26 12:31:09 -04:00
1fa621d02d correct quoted screen output 2021-07-25 21:18:52 -04:00
ef244c3061 small updates to the introduction 2021-07-25 21:05:33 -04:00
7e6a06b1cc update Pizza.py URLs 2021-07-25 21:04:26 -04:00
0513ba2df5 spelling 2021-07-25 20:28:14 -04:00
5a79429f03 fix up some more package designations and clean up some legacy formatting 2021-07-25 20:23:37 -04:00
18b1e10be8 Merge branch 'master' into package-reorganization2 2021-07-25 19:21:47 -04:00
1ebd60e35e update and add explanation 2021-07-25 10:56:38 -04:00
afc54639c4 update references to USER-MISC package 2021-07-25 10:42:35 -04:00
41db4235d6 update package names for pair style moved away from USER-MISC 2021-07-25 10:28:40 -04:00
513e792ece fix required package message 2021-07-25 10:15:15 -04:00
9d9b089700 get rid of references to USER-MISC in the general discussion 2021-07-25 10:03:16 -04:00
9d162d865a move pimd to REPLICA 2021-07-25 09:59:56 -04:00
2e4119dca7 update package list and details for newly created packages and removed USER-MISC 2021-07-24 21:01:19 -04:00
f192102da9 move examples away from USER-MISC now that the package folder is gone 2021-07-24 20:53:23 -04:00
57270c5339 set flag to tell CMake to not use/link the MPI C++ interface in the correct place 2021-07-24 13:46:13 -04:00
add7565d9f recover unit test compilation 2021-07-23 18:24:40 -04:00
852f18525d complete moving packages and styles around 2021-07-23 18:11:25 -04:00
0de2167fb6 Merge pull request #2846 from stanmoore1/mpich
Add logic for GPU-enabled MPICH to Kokkos package
2021-07-23 14:42:18 -04:00
1bc0a5ca8a Merge branch 'master' of github.com:lammps/lammps into mpich 2021-07-23 10:28:28 -06:00
c587252894 rename unittest YAML files 2021-07-23 12:13:50 -04:00