Commit Graph

1234 Commits

Author SHA1 Message Date
6e8d9cb532 Port bugfix in Kokkos 2022-01-19 10:27:02 -07:00
cb796e8b60 Fix HIP compile issues 2022-01-17 08:21:52 -07:00
7e92809288 Merge pull request #3069 from Vsevak/fix-hip-ffast-math
Fix HIP Makefile under lib/gpu
2022-01-03 11:37:55 -05:00
14e5474174 restore obsolete compilation settings similar to parallel makefile 2021-12-27 20:31:42 -05:00
b781410f92 Delete fast-math flag from Makefile.hip for AMD platforms 2021-12-28 03:11:02 +03:00
5594a38bb7 replace explicit Makefile.mpi with symbolic link 2021-12-27 10:47:23 -05:00
6357f19260 Added back Makefile.mpi in lib/gpu/ to be consistent with documentation; updated Makefile.*; and removed the unnecessary Makefile.turing 2021-12-27 00:14:04 -06:00
4f34c4374b Merge pull request #3053 from stanmoore1/kk_desul
Enable Kokkos Desul atomics in Makefile to match CMake settings
2021-12-11 06:12:50 -05:00
abd3df0c5a Merge pull request #3040 from akohlmey/collected-small-changes
Collected small changes and bugfixes
2021-12-10 15:51:13 -05:00
0ab0e2747c Update comment 2021-12-10 12:15:10 -07:00
7aeab56eb2 Enable Kokkos Desul atomics in Makefile to match CMake settings 2021-12-10 12:09:32 -07:00
65d31dfeb1 Adjustments to lib/kim/Install.py and docs 2021-12-01 16:49:00 -06:00
4d4c04dd7c include support for building with plumed 2.7.3 and 2.6.5 2021-12-01 10:56:23 -05:00
b2410ee70b Update Kokkos library in LAMMPS to v3.5.0 2021-11-30 10:57:43 -07:00
564098e629 Update Kokkos library in LAMMPS to v3.5.0 2021-11-04 12:45:59 -06:00
c9da75ef85 Merge pull request #2968 from yury-lysogorskiy/feature/ml-pace-multispecies
Add multi-species support to ML-PACE package
2021-10-27 16:04:15 -04:00
c0c45be357 bugfix Fedora CMake compilation 2021-10-27 17:19:18 +02:00
9895d8436a update/clean downloading the ML-PACE/v.2021.10.25.tar.gz 2021-10-27 16:03:44 +02:00
4551bf4bc0 yaml-cpp-pace: bugfix in CMakeLists.txt 2021-10-26 10:19:11 +02:00
52d99700ec Download and compile modified YAML-cpp 0.6.3 in namespace YAML_PACE 2021-10-25 17:34:08 +02:00
ede188652b update a few GPU kernels so they can be compiled on GPUs without double precisions support 2021-10-21 07:33:00 -04:00
87b63f768f Only check for GPU double precision support if a GPU is present 2021-10-18 12:15:05 -04:00
e990a1cf61 remove ambiguity between "double_precision" class member variable and function 2021-10-16 21:07:04 -04:00
ef04f6ca69 Merge pull request #2993 from akohlmey/collected_small_changes
Collected small changes and fixes
2021-10-14 15:32:42 -04:00
27145d2789 catch up on refactoring default destructors that were missed previously 2021-10-14 01:12:04 -04:00
2fba6b44e4 use '= default' when default functions should be used 2021-10-13 23:59:05 -04:00
34d54247b6 Merge branch 'develop' into collected_small_changes 2021-10-13 22:55:21 -04:00
afad3f42d5 Report only compatible GPU, i.e. no GPU if mixed/double precision is requested by the hardware does not support it 2021-10-13 21:15:16 -04:00
88631372ec use nullptr instead of NULL or 0 where applicable 2021-10-12 21:47:02 -04:00
7b6a3c4307 remove redundant void arguments 2021-10-12 21:17:46 -04:00
9cf6b927cb Merge branch 'master' into collected-small-changes
# Conflicts:
#	src/REAXFF/fix_reaxff_species.cpp
2021-10-11 21:24:11 -04:00
124f7760d8 Merge branch 'master' into feature/ml-pace-multispecies 2021-10-11 07:30:22 -04:00
ba44d6aba2 must set define to "see" the lammps_open() library function 2021-10-09 10:20:47 -04:00
dd6e3c1acc avoid variable length array and signed vs. unsigned warnings 2021-10-08 20:07:20 -04:00
203b779622 also update eigen download for traditional build 2021-10-02 23:17:08 -04:00
32049c3484 adopt for new multispecies PACE implementation 2021-09-29 16:04:09 +02:00
7601001632 Fix Colvars output files not written with "run 0"
See:
  https://github.com/Colvars/colvars/commit/ff2f0d39ee5
which fixes a bug introduced in:
  https://github.com/Colvars/colvars/commit/1e964a542b

The message applies to NAMD, but the logic used in LAMMPS when handling "run 0" is very similar.

The Colvars version string is also updated, however this commit does not
include other changes, such as the following:
  https://github.com/Colvars/colvars/pull/419
which were not fully completed before the LAMMPS Summer 2021 finalization.
2021-09-27 13:38:30 -04:00
9da8c932ab make check more obvious 2021-09-25 21:33:10 -04:00
530912a930 detect double precision support according to OpenCL specs (1.2 and later) 2021-09-25 07:20:52 -04:00
42dca75225 add check and suitable error message when fp64 is required but not available 2021-09-24 12:17:58 -04:00
17ba0d5804 possible workaround for some GPU package neighbor list issue 2021-09-22 21:47:32 -04:00
9906486578 correct paths to downloaded PACE package sources in lib 2021-09-22 12:40:19 -04:00
afccf1933f correctly specify the destructor function name. 2021-09-20 23:40:14 -04:00
cd3efc3fa8 initialize all members 2021-09-17 22:45:26 -04:00
e6fb0e3bd8 small tweaks 2021-09-17 16:51:37 -04:00
5411075cc6 modernize 2021-09-16 07:44:27 -04:00
00e396c921 move misplaced #endif and make code more readable 2021-09-16 07:33:24 -04:00
353b3a2bb3 reformat for increased readability 2021-09-16 07:25:04 -04:00
272badfa7f small tweaks 2021-09-15 20:14:06 -04:00
7196a295a6 small tweaks from static code analysis 2021-09-15 19:50:52 -04:00