|
|
acf6d54ec1
|
python3 port, yet untested
|
2017-07-27 09:25:39 -04:00 |
|
|
|
0427f6205e
|
fix typo
|
2017-07-27 09:25:02 -04:00 |
|
|
|
da7a5f55d3
|
Merge branch 'kim-install' into install-and-docs-reviewed
|
2017-07-26 19:32:55 -04:00 |
|
|
|
715c797df0
|
simplify Install.py for voronoi
|
2017-07-26 15:14:12 -04:00 |
|
|
|
fd6e11f821
|
convert copies of Install.py files to symlinks
|
2017-07-26 14:29:52 -04:00 |
|
|
|
f7a243a4d9
|
convert explicit copies back into symbolic links
|
2017-07-26 14:20:03 -04:00 |
|
|
|
f0d286358e
|
must not include system headers within 'extern "C"' blocks. breaks with MPICH
|
2017-07-26 14:02:02 -04:00 |
|
|
|
bc446bb8b0
|
Merge branch 'master' into USER-DPD_kokkos_testing
|
2017-07-25 12:12:30 -06:00 |
|
|
|
aa60ef6ed8
|
Cleaned up 3-body kernels, reverted some mistaken changes to vashishta
|
2017-07-23 00:08:55 -05:00 |
|
|
|
a71f5a0c20
|
Enabled again neigh no with tpa > 1 for 3-body gpu styles for backward compatibility, could be slower than neigh no tpa 1 in many cases
|
2017-07-22 22:57:37 -05:00 |
|
|
|
3d1d0c58c7
|
Cleaned up 3-body gpu styles, and fixed a bug for tersoff/zbl/gpu.
There is a unresolved bug for neigh no with tpa > 1 with BaseThree, enforce tpa = 1 for neigh no in BaseThree for now.
|
2017-07-21 12:08:04 -05:00 |
|
|
|
1b704bab18
|
Merge branch 'colvars-safer-makefiles' of https://github.com/giacomofiorin/lammps into colvars-quickfix
|
2017-07-20 15:59:23 -04:00 |
|
|
|
c98f6140e7
|
Change order of targets in Makefiles for Colvars
|
2017-07-20 15:49:31 -04:00 |
|
|
|
5031f5b807
|
Comment out use by Colvars of Makefile.lammps from other packages
|
2017-07-20 15:48:10 -04:00 |
|
|
|
9d0d90c038
|
README clarification from giacomo
|
2017-07-20 15:25:27 -04:00 |
|
|
|
66154e8a8b
|
avoid makefile failure, if LAMMPS has not been configured yet
|
2017-07-20 15:05:58 -04:00 |
|
|
|
84065dde21
|
Refactor lib/kim/Install.py; works with phtyon 3 2.7
|
2017-07-20 12:02:50 -05:00 |
|
|
|
ef9fb944c7
|
Detect number of processors for make
|
2017-07-20 10:53:08 -04:00 |
|
|
|
187a80be77
|
Add forgotten decode() in Install.py
|
2017-07-19 22:21:49 -04:00 |
|
|
|
355aad9691
|
restore python3 support. this now can run with python 2.7.13 and 3.5.3.
|
2017-07-19 17:19:44 -04:00 |
|
|
|
ee6cac826e
|
Update Colvars to version 2017-07-15 and support automated builds for it
|
2017-07-19 14:24:07 -04:00 |
|
|
|
f181a0bfab
|
Update lib/kim/Install.py for phthon 2.7 conversion
|
2017-07-19 12:54:33 -05:00 |
|
|
|
81f342aafa
|
fix variable name bug and synchronize with other ported Install.py files
|
2017-07-18 18:06:18 -04:00 |
|
|
|
7ccb0d37cd
|
port USER-SMD folder. make voronoi consistent with it
|
2017-07-18 17:37:48 -04:00 |
|
|
|
03cd4c5255
|
ported lib/voronoi/Install.py to python 3.x and tested with 2.7
|
2017-07-18 17:16:10 -04:00 |
|
|
|
d7355801df
|
Make KIM Install.py Python 3 compatible
|
2017-07-15 12:03:04 -05:00 |
|
|
|
296e572e69
|
better Install.py script for KIM from Ryan Elliott
|
2017-07-14 16:25:16 -06:00 |
|
|
|
cdac5f496c
|
Built 3-body short neighbor list for the 3-body kernels using per-pair cutoffs for vashishta gpu style
|
2017-07-11 00:13:56 -05:00 |
|
|
|
8c9db3ea00
|
Built 2-body short neighbor list and used for 2-body kernels in tersoff gpu styles
|
2017-07-10 23:50:21 -05:00 |
|
|
|
e30c5fc956
|
Fixed shebang and renamed to lib/kim/Install.py
|
2017-07-10 21:05:29 -05:00 |
|
|
|
c29e8fba9b
|
Updated lib/kim/README file to go along with new install.py
|
2017-07-10 17:00:30 -05:00 |
|
|
|
8d592f4b9e
|
Finalized code for lib/kim/install.py
|
2017-07-10 16:43:23 -05:00 |
|
|
|
ea2b01e83b
|
Refactored 3-body gpu styles to remove code duplication
|
2017-07-08 20:17:31 -05:00 |
|
|
|
34fe2273f6
|
Added short neighbor list implementation for tersoff/zbl/gpu and tersoff/mod/gpu
|
2017-07-08 14:59:48 -05:00 |
|
|
|
77c60189b8
|
Minor cleanups for tersoff/gpu
|
2017-07-08 14:43:53 -05:00 |
|
|
|
1c6533e53d
|
Working on short neighbor list for tersoff/gpu
|
2017-07-08 14:15:26 -05:00 |
|
|
|
68206079da
|
Supported short neighbor lists for 3-body kernels in sw/gpu and vashishta/gpu
|
2017-07-07 16:47:24 -05:00 |
|
|
|
b0be8b24ea
|
Further work on lib/kim/install.py
|
2017-07-06 15:50:03 -05:00 |
|
|
|
16fc2d6fe1
|
Add install.py and update config for kim lib
|
2017-07-06 15:49:58 -05:00 |
|
|
|
da0dcbe0bb
|
Updating to master
|
2017-06-19 10:56:24 -06:00 |
|
|
|
d3c90f3c14
|
Merge pull request #510 from akohlmey/collected-small-changes
Collected small changes
|
2017-06-15 11:12:14 -06:00 |
|
|
|
7227bc415d
|
Merge pull request #526 from andeplane/vashishta_gpu
Implemented pair style vashishta in GPU package
|
2017-06-15 08:52:13 -06:00 |
|
|
|
d7646aeeed
|
Fixed opencl error
|
2017-06-14 12:03:47 +02:00 |
|
|
|
5f9341813d
|
Removed debug output
|
2017-06-14 10:57:54 +02:00 |
|
|
|
8441307185
|
Removed non-general CUDA-dir in makefile
|
2017-06-14 10:28:46 +02:00 |
|
|
|
720af5c360
|
Added vashishta to OpenCL makefile
|
2017-06-14 10:27:52 +02:00 |
|
|
|
eeff0b8633
|
Added vashishta GPU package for NVidia
|
2017-06-14 10:24:16 +02:00 |
|
|
|
0ecdb99885
|
fix uninitialized data access as reported by @martok in #174
|
2017-06-08 13:50:17 -04:00 |
|
|
|
00ce15d043
|
Remove tpls dir
|
2017-06-08 10:43:19 -06:00 |
|
|
|
5c1d17d1c0
|
Updating Kokkos lib to v2.03.05
|
2017-06-08 10:42:08 -06:00 |
|