Commit Graph

14485 Commits

Author SHA1 Message Date
fccc16f42c tune OpenCL for generic architecture by default 2018-05-08 00:50:23 -04:00
e7e1827e57 remove variable length arrays in gpu lib 2018-05-08 00:48:53 -04:00
c9817b0db9 update src/.gitignore 2018-05-08 00:33:27 -04:00
318dfd0613 correct indentation 2018-05-08 00:32:49 -04:00
f4d14c96e8 convert poems lib to use c++-style header includes 2018-05-08 00:29:56 -04:00
3394d18a2a convert gpu lib to use c++-style include files 2018-05-08 00:25:10 -04:00
ff6507e7b7 convert colvars lib to use c++ style header files 2018-05-08 00:17:57 -04:00
fff962646f convert awpmd header include to c++ style 2018-05-08 00:10:20 -04:00
f39a8d46d1 convert atc library header files to C++ style 2018-05-08 00:05:18 -04:00
1888b616c4 remove some extra semicolons 2018-05-07 18:04:25 -04:00
104dde27ed eliminate variable length arrays from AtC lib for C++ standard compliance 2018-05-07 17:36:34 -04:00
bfdfd36c1c Merge pull request #894 from akohlmey/cplusplus-clang-fixes
More fixes to conform with C++ standards as indicated by Clang
2018-05-07 14:53:43 -06:00
a4759210a8 Merge pull request #893 from ohenrich/user-cgdna
Docs update and journal reference for USER-CGDNA package
2018-05-07 14:39:32 -06:00
7fed6c7e4c Merge pull request #634 from craabreu/master
Computation of forces/torques on rigid bodies moved to post_force
2018-05-07 14:39:10 -06:00
82217001c8 must use fabs() on doubles, not abs(), to avoid ambiguity 2018-05-07 15:56:35 -04:00
b2370b6986 use correct namespace when instantiating IntelBuffers; 2018-05-07 15:49:51 -04:00
7cf42e42eb make links to citations unique across files 2/2 2018-05-07 14:25:18 -04:00
d80b375e26 make links to citations unique across files 1/2 2018-05-07 14:24:00 -04:00
d203118286 update rigid body reference outputs. add bodyforces early examples 2018-05-07 14:19:50 -04:00
74fbb84b8c Merge pull request #878 from jrgissing/group_extract
Group extract
2018-05-07 11:45:37 -06:00
5076b6d161 Removed old documentation 2018-05-07 18:25:55 +01:00
fcdcdb3286 Merge branch 'master' into user-cgdna 2018-05-07 18:19:24 +01:00
722549965e Added reference to implementation paper 2018-05-07 18:13:18 +01:00
ca96a7ab05 Merge pull request #891 from akohlmey/collected-small-changes
Collected small changes, fixes and updates
2018-05-07 10:43:19 -06:00
8ec033e823 Merge pull request #889 from akohlmey/cplusplus-compliance
Collected changes to restore C++ standard compliance
2018-05-07 10:42:22 -06:00
a7c9418629 Merge pull request #890 from jrgissing/bond_react_final_touches
bond/react final touches
2018-05-07 10:37:47 -06:00
bc0c405bfa Merge pull request #887 from akohlmey/create-bonds-single-bugfix
Fix bug in create_bonds single/bond
2018-05-07 10:37:00 -06:00
1ea5b9eabb Merge pull request #879 from mdelyser/USER-BOCS
USER-BOCS
2018-05-07 10:34:51 -06:00
d9d33ac766 add ability to set multiplicity for dihedrals with fix restrain
this introduces an optional keyword, so backward compatibility is preserved.
this closes #884
2018-05-07 07:23:29 -04:00
d51745fd27 whitespace cleanup 2018-05-07 07:23:29 -04:00
c3588f08b7 provide keyword/value option to compute ackland/atom for selecting legacy or current variant of implementation 2018-05-07 07:23:29 -04:00
ecfe5c8373 use american spelling of neighbor consistently in docs and code comments 2018-05-07 07:23:29 -04:00
009666d9a5 need to ignore pair style kim in src/ 2018-05-07 07:23:29 -04:00
551ea9694d add VTK config for recent fedora versions 2018-05-07 07:23:29 -04:00
d7339bbd9e significantly expand .github/CODEOWNERS file to automatically notify more contributors of changes to files/packages they maintain 2018-05-07 07:23:29 -04:00
934f825388 update USER-INTEL Install.sh script and dependency handling 2018-05-07 07:23:29 -04:00
f4fbdea0b3 update .gitignore for lib/latte 2018-05-07 07:23:29 -04:00
14588f6242 remove dead code and fix compilation for fix mscg 2018-05-07 07:23:29 -04:00
5e49976b70 correct typo in fix bond/react docs 2018-05-06 11:17:34 -04:00
9d9d7cb9ed update example log files 2018-05-06 11:10:40 -04:00
941d289a69 cosmetic changes to avoid compiler warnings 2018-05-06 10:54:34 -04:00
e1f9ee1347 fix1 2018-05-06 01:04:23 -06:00
916ed71760 fix bond/react final touches 2018-05-06 00:34:03 -06:00
9d6891823a some more cosmetic changes 2018-05-05 20:38:22 -04:00
e14b61e4a4 replace variable length array with constant length through making maxLine constant 2018-05-05 19:51:30 -04:00
2d321a602c Merge pull request #10 from lammps/master
rebase
2018-05-05 14:22:23 -06:00
9acd35abe2 another change to fix poems 2018-05-05 10:52:39 -06:00
0c53afbfcf more changes to fix rigid and fix poems 2018-05-05 10:39:01 -06:00
2616dd91f9 include USER-BOCS package in cmake 2018-05-05 12:05:32 -04:00
f7c37a7a98 adapt isfinite() handling to upstream 2018-05-05 11:46:35 -04:00