Commit Graph

10913 Commits

Author SHA1 Message Date
abf05eed61 comm tiled bug fix patch_15Sep2016 2016-09-16 10:31:52 -06:00
72ce8ff89f Merge pull request #31 from akohlmey/doc-cleanups-and-updates
More documentation cleanups and updates
2016-09-16 10:05:53 -06:00
2831f50790 Merge branch 'integration' into doc-cleanups-and-updates 2016-09-14 19:02:45 -04:00
2fb666dc69 Merge branch 'doc' into integration 2016-09-14 13:32:39 -06:00
2f298951cf resolved conflicts 2016-09-14 10:22:46 -06:00
717e719b83 HTML update 2016-09-14 09:35:03 -06:00
523c70e0be regenerate html files one more time 2016-09-14 10:01:13 -04:00
77e0a84877 fix an inconsistency and a typo 2016-09-14 09:59:36 -04:00
9779911cea regenerate html files from scratch after merging from upstream and including richard's last updates to the converter tools 2016-09-14 09:54:06 -04:00
1ad15b8711 Merge branch 'integration' into doc-cleanups-and-updates 2016-09-14 09:48:46 -04:00
7025a3f5d1 Merge pull request #32 from rbberger/doc-cleanups-and-updates
Various updates to tools and some minor documentation fixes
2016-09-14 09:46:05 -04:00
df304f8ca1 Updated HTML after latest tool changes and corrections 2016-09-13 20:22:17 -04:00
3c88fa1436 Fix bug introduced in latest changes 2016-09-13 20:18:36 -04:00
b7ddc860c7 Fix error in Manual.txt 2016-09-13 20:00:17 -04:00
c61d5a1a29 Raise exception and output error if ulb,ule and olb,ole are unbalanced 2016-09-13 19:53:57 -04:00
10b4411d5b Merge branch 'integration' of github.com:akohlmey/lammps into integration 2016-09-13 17:22:14 -06:00
c744b23c4c doc updates 2016-09-13 17:15:15 -06:00
a69e059be3 Merge pull request #27 from akohlmey/small-bugfixes
Collected small changes and bugfixes
2016-09-13 17:11:23 -06:00
dbc548dd88 Merge pull request #26 from rbberger/is_available_feature
Extend is_available() function to query optional features
2016-09-13 17:10:10 -06:00
1dc19eceb2 Update unit tests to reflect new behavior 2016-09-13 19:03:57 -04:00
ae6b540d3c Add indentation to multi-paragraph entries 2016-09-13 19:03:46 -04:00
25e518a4f4 added options to compute bond/local 2016-09-13 17:03:37 -06:00
fe2fca4e9b clean-up of example files 2016-09-13 14:58:02 -06:00
ed52f9ea5e pair vashishta/table 2016-09-13 14:54:12 -06:00
944289b018 final version of pair vashishta/table 2016-09-13 14:45:53 -06:00
80c5b01bfc flag 'allocated' must be initialized in constructor 2016-09-13 14:33:00 -04:00
51e4a568c9 Merge branch 'small-bugfixes' of github.com:akohlmey/lammps into small-bugfixes 2016-09-13 14:32:27 -04:00
300d1ef52e Remove references to former empty file 2016-09-13 14:17:27 -04:00
633840c876 remove empty file 2016-09-13 13:46:45 -04:00
c44228b0cc Created more complete TOC and indices
This adds index sections on the main navigation bar and finally silences the
missing TOC warnings.
2016-09-13 13:40:18 -04:00
90f6395ddc Filter out more header numbers 2016-09-13 13:31:30 -04:00
a8081d4507 fix qeq Kokkos bug fix by Stan 2016-09-13 10:54:04 -06:00
14bed44743 ignore Makefile.lammps in lib tree 2016-09-13 09:36:48 -04:00
18cacb8e1d ignore *.mod generated by fortran compilers 2016-09-13 09:36:19 -04:00
546582ea02 Escape pipe characters 2016-09-12 23:18:38 -04:00
b76a42d3e0 making a few more in-page links unique. some more small corrections and clenups 2016-09-12 19:57:37 -04:00
54d5a14fe3 more doc formatting issues triggering errors/warnings in sphinx 2016-09-12 14:48:47 -04:00
f6efde3730 some more smaller doc file cleanups. almost there... 2016-09-12 13:37:08 -04:00
4c399fc553 more typesetting corrections in docs indicated by sphinx warnings 2016-09-12 12:23:53 -04:00
328b7abeaa correct various formatting issues flagged by sphinx 2016-09-11 23:24:32 -04:00
c3de3c142f correct references to Howto subsections 2016-09-11 23:01:16 -04:00
80f94c7d02 avoid bad typesetting of include images 2016-09-11 20:09:46 -04:00
e11bfcf117 updates in "Getting Started" for running on Windows. 2016-09-11 20:09:25 -04:00
be1cf40f2b update html files with recent changes 2016-09-11 19:34:04 -04:00
555a02786d correct and improve typesetting for various sub-sub-subsections in "Getting started" 2016-09-11 19:28:56 -04:00
cf6f504977 update description of Windows support in "Getting started" Section 2016-09-11 19:07:45 -04:00
b698f389bc correct and improve links to PyMol and MATLAB 2016-09-11 18:46:06 -04:00
e53862ca4a update html file updated boundary.txt file 2016-09-11 14:55:13 -04:00
a64eb330e3 document how using shrink-wrap boundaries can cause lost atoms in parallel 2016-09-11 14:48:37 -04:00
e96a8a4677 regenerate html pages with the updated content from the corrections 2016-09-10 21:15:44 -04:00