Commit Graph

11038 Commits

Author SHA1 Message Date
829d11e88b Merge pull request #44 from rbberger/doc-fixes
Some documentation fixes and IPython updates
patch_28Sep2016
2016-09-27 15:36:10 -06:00
96f31d6dad Merge pull request #43 from akohlmey/doc-fixes
Documentation fixes
2016-09-27 15:35:41 -06:00
35705217f4 enable multi-processor NEB replicas 2016-09-27 15:34:08 -06:00
9a2f738673 sync with SVN 2016-09-27 15:32:57 -06:00
a3a3af691c Merge branch 'balance' into integration 2016-09-27 10:53:56 -06:00
f9677e6d7b released version of weighted balancing 2016-09-27 10:52:27 -06:00
a3277117e2 Add filter which merges preformatted sections 2016-09-26 18:52:43 -04:00
67d4c07689 Do not escape underscore inside preformat blocks 2016-09-26 18:52:31 -04:00
877a504933 Fix typo in Section_howto.txt 2016-09-26 18:44:25 -04:00
8a951f9d79 fix typo 2016-09-26 18:43:03 -04:00
69a8842ecb update load balance weights documentation for fix balance and balance 2016-09-26 18:33:50 -04:00
2af5c75f42 correct issue from merge 2016-09-26 18:32:01 -04:00
158599fca2 Merge branch 'balance2' into weighted-balancing 2016-09-26 18:25:36 -04:00
7732548b3c correct issues related to the addition of fix cmap 2016-09-26 18:14:32 -04:00
2c5f6e1a99 fix a broken link that slipped through the cracks in the previous cleanup 2016-09-26 18:13:18 -04:00
d0aa13b543 Fix broken link in Section_packages.txt 2016-09-26 16:53:18 -04:00
c31b026797 Merge branch 'integration' into weighted-balancing 2016-09-26 15:20:22 -04:00
47b52ed2dd Merge branch 'integration' into balance2 2016-09-26 15:19:48 -04:00
c87f9aeb9f Merge remote-tracking branch 'akohlmey/integration' into ipython-update-and-cleanup 2016-09-26 11:59:30 -04:00
b97b9dd661 new fix cmap command patch_26Sep2016 2016-09-26 08:40:53 -06:00
86d17a5784 Merge pull request #42 from akohlmey/redo-fix-ti-spring-fixes
Redo fix ti/spring bugfixes and updates
2016-09-23 15:12:24 -06:00
c00cd6192d Merge pull request #41 from akohlmey/doc-fixes
Documentation updates and corrections
2016-09-23 14:57:23 -06:00
fc031c34bd Merge pull request #40 from akohlmey/eam-fixes-for-scale
Eam fixes for scale
2016-09-23 14:56:04 -06:00
d730cda248 Merge pull request #37 from rbberger/library_interface_abort
Allow detection of MPI_Abort condition in library call
2016-09-23 14:54:43 -06:00
6f4b7268de sync with SVN 2016-09-23 14:52:45 -06:00
08f0bf9025 new verion of balance weighting 2016-09-23 14:37:53 -06:00
3d5f5bf40e a few more consolidations of link anchors 2016-09-23 10:25:10 -04:00
065d35eefa update kokkos compilation instructions to use provided preset makefiles 2016-09-22 23:53:19 -04:00
3785249033 use "make mpi" instead of "make g++" in examples 2016-09-22 23:52:52 -04:00
e18941e865 delete bogus line (how did this get into the docs?) 2016-09-22 23:41:53 -04:00
c6cebe66c7 making more links and anchors consistent and correct errors 2016-09-22 22:26:17 -04:00
08d9792ec8 add an additional explanation to compute XXX/tally docs and fix a typo 2016-09-22 21:46:45 -04:00
c10aa55fc1 Merge branch 'integration' into doc-fixes 2016-09-22 09:19:45 -04:00
2bf6688388 fix bug in fix_modify respa reported by steven early strong on lammps-users 2016-09-22 06:03:49 -04:00
b3217218d6 doc page sync with SVN patch_21Sep2016 2016-09-21 20:54:20 -06:00
d3406df6a0 Updated instructions in IPython notebooks
Make.py is now used to enable exceptions support
2016-09-21 12:07:59 -04:00
a4c8c9b1f9 Strip IPython notebooks of output 2016-09-21 11:35:00 -04:00
f1183cb97c Remove old copies of IPython notebooks 2016-09-21 11:28:15 -04:00
68d6f105d0 need to add removed fix ti/rs to purge list 2016-09-21 07:28:27 -04:00
b27179bbef restore bugfixes and updates that were lost. flag time dependet. correct use of citeme. 2016-09-21 07:27:37 -04:00
90ff54c44f Ensure all library functions capture exceptions 2016-09-20 19:19:38 -04:00
2943dd5c12 correct another broken link in fix ti/spring 2016-09-20 19:02:13 -04:00
33d9a55d35 remove references to docs for fix ti/rs 2016-09-20 19:01:58 -04:00
5345efb5b8 correct broken link in updated fix ti/spring docs 2016-09-20 18:57:01 -04:00
9bedb8a1c9 ignore generated files in html folder 2016-09-20 18:54:51 -04:00
0d7e4f1e88 update docs for pair style gauss/cut to document optional per pair cutoff 2016-09-20 18:51:50 -04:00
9ef748bbaa remvoing doc/html 2016-09-20 16:46:59 -06:00
259177630a whitespace cleanup 2016-09-20 16:47:04 -04:00
10034ce336 port support for scale[] factor with fix adapt to OPT and USER-OMP 2016-09-20 16:46:54 -04:00
281ace327f we should scale energies as well as forces 2016-09-20 16:46:05 -04:00