Commit Graph

17281 Commits

Author SHA1 Message Date
dc1e31506e Merge pull request #1480 from akohlmey/next_version
Step version string for next release
patch_31May2019
2019-05-31 14:40:13 -04:00
68d69955d0 fix off-by-one error 2019-05-31 14:38:12 -04:00
5f657b9184 step version string for next release 2019-05-31 14:37:31 -04:00
3e4fd3dade Merge pull request #1484 from akohlmey/reneighbor-64-bit-restart-fix
Restart updates for fixes atom/swap, deposit, and gcmc
2019-05-31 13:05:53 -04:00
3e05b983c1 Merge pull request #1483 from akohlmey/cmake-workaround-for-gcc-9
Do not enable OpenMP by default for gcc 9.x with CMake
2019-05-31 13:05:37 -04:00
d8a30a9697 Merge pull request #1475 from akohlmey/collected-small-changes
Collected small changes for stable release
2019-05-31 13:05:21 -04:00
8b169d97f5 update documentation for updates to fix restarting 2019-05-31 00:58:10 -04:00
f73c848ee4 detect and error out when timestep was reset when restarting fixes atom/swap, gcmc, or deposit 2019-05-31 00:31:36 -04:00
4243af30d7 properly store 64-bit integers for next_reneighbor into double type buffers for restarts of fixes
also store number of attemps and number of successes in restart and retrieve those from it
2019-05-31 00:23:12 -04:00
9d51ee17b0 change the default for gcc 9.x and beyond to not enable OpenMP by default even if it is found to be supported
this is so that using CMake by default will compile LAMMPS, since gcc 9.x
expects different sharing semantics for constants than previous versions.
2019-05-30 22:23:50 -04:00
c903a110fe fix typo 2019-05-30 18:36:09 -04:00
02e7dd5716 also allow %e in format variables of suffix 2019-05-30 14:52:26 -04:00
1a5c3c6dcb add check that allows only %f and %g conversions in variable format strings 2019-05-30 14:46:07 -04:00
daac3f7102 Merge pull request #1419 from akohlmey/report-uninstalled-pkg-style
Improved error messages when a style is not found
2019-05-30 06:34:56 -04:00
3bf0a4ba63 Merge pull request #1474 from stanmoore1/nl_mem
Don't reallocate views every time in neigh_bond_kokkos
2019-05-30 06:30:54 -04:00
9cc16c4f33 Merge pull request #1479 from akohlmey/fixup_pair_quip
Correctly and fully support pair style hybrid and hybrid/overlay for pair style quip
2019-05-30 06:30:10 -04:00
8dcd6fc48c provide alternative to gettimeofday() for MSVC compilation 2019-05-29 20:13:26 -04:00
a48f1cbf00 fix spelling error 2019-05-29 20:07:00 -04:00
d3cbccff35 whitespace cleanup 2019-05-29 14:42:18 -04:00
29d36ffec0 error out when not using metal units with QUIP 2019-05-29 14:40:09 -04:00
fec2f8f69b update docs for fully supporting hybrid styles 2019-05-29 14:39:45 -04:00
c0cfceb95c fix off-by-one errors 2019-05-29 14:03:00 -04:00
12fcf5f5ef properly set up pair style quip for hybrid and hybrid/overlay 2019-05-29 14:00:33 -04:00
cb8d89855d remove limitation to hybrid/overlay 2019-05-29 13:59:51 -04:00
c8d50c04a4 avoid memory leak and initialize class member pointers 2019-05-29 10:12:24 -04:00
e82e1c695a correct links in package documentation 2019-05-24 19:45:48 -04:00
2ee02cfadd Don't reallocate views every time in neigh_bond_kokkos 2019-05-24 11:27:09 -06:00
cfad0634ac Merge pull request #1465 from akohlmey/collected-minor-changes
Collected small changes and bugfixes
2019-05-21 16:55:19 -04:00
bd05228c71 Merge pull request #1464 from akohlmey/group-group-coord-num
Add option to restrict coordination number by group
2019-05-21 16:55:05 -04:00
0f1e4b0504 Merge pull request #1467 from stanmoore1/eam_kk
Fix bug in pair_style eam/alloy/kk and pair_style eam/fs/kk
2019-05-21 16:54:51 -04:00
d0c6484fb0 add false positive 2019-05-20 15:15:51 -04:00
0349e9fee9 update/correct list of example folders 2019-05-20 15:08:33 -04:00
55116db8fb avoid segfault and print more meaningful error message with empty lines in coeff sections 2019-05-20 14:15:04 -04:00
1041934568 Fix bug in pair_eam_alloy_kokkos and pair_eam_fs_kokkos 2019-05-20 10:01:40 -06:00
50082c287d sphinxcontrib-spelling has been updated for Sphinx 2.x. remove enforcing to use old version 2019-05-18 15:41:38 -04:00
e3823a521c remove leftover references to removed MEAM package 2019-05-18 15:36:13 -04:00
35bb2ac2a3 fix typo 2019-05-18 09:25:20 -04:00
c7eb9a8626 there really isn't a problem with calling this compute multiple times 2019-05-17 15:26:35 -04:00
fb8d31422d fix typo 2019-05-16 09:06:17 -04:00
27a2d0cbd4 add option to restrict coordination number by group 2019-05-16 08:55:03 -04:00
7b264d35fa remove dead code 2019-05-15 14:53:51 -04:00
267782d689 Merge pull request #1459 from akohlmey/next-patch-release
Step version string for next patch release
patch_15May2019
2019-05-14 21:30:28 -04:00
f2b293d93b Merge pull request #1460 from akohlmey/collected-small-changes
Some more small changes
2019-05-14 17:55:36 -04:00
6e842ba84a fix typo 2019-05-14 17:36:26 -04:00
30dc7f70b5 correct repeated words in docs 2019-05-14 17:13:46 -04:00
98702cc0b9 Merge pull request #1461 from lammps/doc-tweak-hyper
add missing formatting info
2019-05-14 17:10:23 -04:00
67532684f9 add missing formatting info 2019-05-14 14:02:54 -06:00
2c51511325 update logfiles for SPIN package with cubic anisotropy 2019-05-14 15:49:41 -04:00
1d5ada136a should set one_coeff flag to 1 in potentials requiring 'pair_coeff * *' 2019-05-14 15:24:37 -04:00
4a4dcef7b7 whitespace cleanup in pair style e3b 2019-05-14 15:24:37 -04:00