Commit Graph

19896 Commits

Author SHA1 Message Date
6354777d09 Merge pull request #1914 from akohlmey/next_lammps_version
Step version string for next patch and stable version
patch_3Mar2020 stable_3Mar2020
2020-03-03 10:27:12 -05:00
3eeb7547b5 step version string for next patch and stable version 2020-03-03 07:25:18 -05:00
c5ee78ca1d Merge pull request #1910 from akohlmey/documentation-fixes
Some more conversions and corrections for the LAMMPS manual
2020-03-03 06:25:44 -05:00
7d598ba8d7 synchronize list of hardware architectures supported by KOKKOS with list in cmake file 2020-03-03 03:33:23 -05:00
7f84de17bd Merge pull request #1912 from migueldiascosta/epyc_kokkos_arch
add EPYC to KOKKOS_ARCH_LIST
2020-03-03 03:32:03 -05:00
a4a5d24a69 add link to github support for subversion clients 2020-03-03 03:19:25 -05:00
8f608f6a35 lo-level -> low-level 2020-03-01 10:30:06 -05:00
ff614957c6 encode some more mathematical expressions and symbols 2020-03-01 09:25:20 -05:00
2455e35fd8 typeset mixing rules with embedded math 2020-03-01 08:51:29 -05:00
8765b14377 add EPYC to KOKKOS_ARCH_LIST 2020-03-01 13:45:06 +08:00
8662733dcd convert the remainder of raw html typesetting in pair style smtbq 2020-02-29 14:45:39 -05:00
228a0bfa2e replace hi- with high- 2020-02-29 11:37:47 -05:00
6f47f110f1 use k_B consistently, fix some more math. convert some transcriptions to math 2020-02-29 11:37:31 -05:00
07fc624509 typeset reduced units 2020-02-29 06:41:28 -05:00
66a0e27edf some more cases where we can use embedded math 2020-02-29 04:57:44 -05:00
e6c9efe6bf convert lists to tables for more compact presentation 2020-02-28 18:52:13 +01:00
f02b2485fa tweak command overview table width so it is readable in PDF 2020-02-28 18:51:52 +01:00
71c11c32e3 replace more raw html code and add syntax highlighting 2020-02-28 18:00:43 +01:00
19d334908b replace raw html with embedded math expressions and fix related issues 2020-02-28 17:39:57 +01:00
03985454ed some more formatting and math conversion improvements 2020-02-27 18:18:49 -05:00
d242051c8e Merge pull request #1898 from akohlmey/next_lammps_version
Update version info for next release candidate
patch_27Feb2020
2020-02-27 14:38:08 -05:00
6e7e365981 Merge pull request #1888 from lammps/release-preparation
Documentation and Build script and Info updates for stable release
2020-02-27 13:23:08 -05:00
3c277409c2 switch parsed-literal to code-block in Howto files where applicable 2020-02-27 12:45:14 -05:00
669a49e994 Merge pull request #1908 from stanmoore1/kk_finalize
Finalize Kokkos on error exit
2020-02-27 12:05:17 -05:00
06ede499c1 use only the LAMMPS logo in the navigation bar 2020-02-27 11:36:00 -05:00
eb8531062c Merge branch 'doc-updates' of github.com:rbberger/lammps into release-preparation 2020-02-27 11:26:15 -05:00
25ec8d36a8 Final batch of index cleanup and code-blocks 2020-02-27 11:08:04 -05:00
704207f3c8 Finalize Kokkos on error exit 2020-02-27 08:51:02 -07:00
2d2cb46dc0 move release date 2020-02-27 08:58:09 +01:00
1bb38ed09b Merge commit 'refs/pull/1903/head' of github.com:lammps/lammps into release-preparation 2020-02-27 01:15:17 -05:00
9ef5949798 Second batch of index cleanup and code-blocks 2020-02-26 16:31:05 -05:00
3563d2f10d remove references to html-offline and only produce the offline viewable html manual 2020-02-26 16:01:03 -05:00
7bd3215226 Merge pull request #1894 from stanmoore1/kk_snap_chunk
Make Kokkos pair SNAP chunksize variable user-settable
2020-02-26 15:27:37 -05:00
ba560bc99e Merge pull request #1905 from akohlmey/compute-pair-neigh-request
Correct compute entropy/atom to work with "avg" flag enabled
2020-02-26 14:23:57 -05:00
275626a1de re-enable perpertual neighborlist for compute entropy/atom if avg flag is used only 2020-02-26 13:57:11 -05:00
49b07a2360 Keep original chunksize value set by user in case atom count changes 2020-02-26 09:42:59 -07:00
a828facbd8 Merge pull request #1900 from akohlmey/couple-lammps-plugin
Example for loading LAMMPS as a plugin from a shared library
2020-02-26 10:40:24 -05:00
37e6fd1bae Merge pull request #1901 from stanmoore1/compea_neigh
Change compute entropy/atom to use occasional neigh list
2020-02-26 10:39:37 -05:00
dcb83d41af Merge pull request #1899 from agiliopadua/thole
Added safeguard to thole pair styles
2020-02-26 07:44:04 -05:00
e766518062 Merge pull request #1896 from pmla/user-ptm-group-fix
Apply compute group correctly for compute ptm/atom
2020-02-26 07:28:01 -05:00
f81b963a8a more strict argument checking and initializing output data to zero 2020-02-26 13:12:39 +01:00
c92378eaca add explanation of use of group2 and document effect of compute group 2020-02-26 13:12:14 +01:00
526c9a548f need to set single_enable to 0 after single() was removed 2020-02-26 12:58:10 +01:00
91c31da576 remove trailing whitespace 2020-02-26 12:52:21 +01:00
8e1928aa65 First batch of index cleanup and code-blocks 2020-02-25 14:46:22 -05:00
e87b3a21c2 complete documentation for LAMMPS plugin coupling example 2020-02-25 14:10:55 -05:00
e083f38c59 Merge pull request #1892 from sef43/master
temper timeout synchronization fix
2020-02-25 13:26:30 -05:00
958d5ca05b Merge pull request #1897 from akohlmey/user-sdpd-atom-style-check
Add check for required atom properties in USER-SDPD
2020-02-25 13:26:00 -05:00
4180b4a7d6 add example to COUPLE folder demonstrating loading LAMMPS as a plugin. 2020-02-25 19:07:49 +01:00
eb51511ddf Change compute entropy/atom to use occasional neigh list 2020-02-25 10:48:00 -07:00