Commit Graph

17310 Commits

Author SHA1 Message Date
0849e03d1b Merge pull request #1490 from akohlmey/next_version
Step version number for stable release
patch_5Jun2019 stable_5Jun2019
2019-06-04 15:23:13 -04:00
045c312c49 Merge pull request #1489 from akohlmey/cmake-2.8-compatibility
Change test for OpenMP default setting to be compatible with CMake 2.8.x
2019-06-04 11:03:22 -04:00
47c6cd86f2 Merge pull request #1477 from jrgissing/bond/react-reaction_topology_overflow
Implement fix bond/react reaction topology overflow checks
2019-06-04 11:02:57 -04:00
27cd78b96d Merge pull request #1488 from akohlmey/doc-removed-features
Document removed features
2019-06-03 22:58:20 -04:00
dd97a7540e Merge pull request #1486 from sstrong99/patch-1
Fix error in E3B documentation
2019-06-03 22:58:02 -04:00
272c536326 use 3 letters for month only 2019-06-03 22:52:40 -04:00
0b13fbe733 step version number for stable release 2019-06-03 22:47:44 -04:00
021f0c1fc6 use consistent variable evaluation in if() 2019-06-03 19:50:48 -04:00
5d96ecff25 fix typo 2019-06-03 19:44:40 -04:00
c76b79f021 chance test for OpenMP default setting to be compatible with CMake 2.8.x 2019-06-03 19:36:28 -04:00
a981626948 mention restart2data as removed feature as well 2019-06-03 09:01:22 -04:00
5f79a9ef80 mention dummy commands with error messages that have been added instead of removed commands 2019-06-02 21:51:06 -04:00
674e3975a8 add section to the Commands chapter listing and explaining removed packages and styles 2019-06-02 21:47:29 -04:00
d0286b3de1 remove mention of USER-CUDA package and fix typo 2019-06-02 20:19:17 -04:00
983f3adbb4 bond/react doc final touches 2019-06-02 12:35:38 -06:00
58a88dff95 bond/react doc correction 2019-06-02 12:10:43 -06:00
0ba38aa072 bond/react doc tweak 2019-06-02 12:05:01 -06:00
2e63280f87 Update fix_bond_react.txt 2019-06-02 11:54:31 -06:00
68eab23cf8 bond/react: doc clarification 2019-06-01 16:24:37 -06:00
6175f2dce8 Fix error in E3B documentation 2019-05-31 15:03:04 -05:00
dc1e31506e Merge pull request #1480 from akohlmey/next_version
Step version string for next release
patch_31May2019
2019-05-31 14:40:13 -04:00
68d69955d0 fix off-by-one error 2019-05-31 14:38:12 -04:00
5f657b9184 step version string for next release 2019-05-31 14:37:31 -04:00
3e4fd3dade Merge pull request #1484 from akohlmey/reneighbor-64-bit-restart-fix
Restart updates for fixes atom/swap, deposit, and gcmc
2019-05-31 13:05:53 -04:00
3e05b983c1 Merge pull request #1483 from akohlmey/cmake-workaround-for-gcc-9
Do not enable OpenMP by default for gcc 9.x with CMake
2019-05-31 13:05:37 -04:00
d8a30a9697 Merge pull request #1475 from akohlmey/collected-small-changes
Collected small changes for stable release
2019-05-31 13:05:21 -04:00
972a7a5c4d add false positive for spell checking 2019-05-31 05:58:47 -04:00
311aebf7ff Update Errors_warnings.txt 2019-05-30 23:30:35 -06:00
16a254f6bd Update Errors_messages.txt 2019-05-30 23:29:43 -06:00
80d906d445 bond/react: update error messages 2019-05-30 23:27:23 -06:00
8b169d97f5 update documentation for updates to fix restarting 2019-05-31 00:58:10 -04:00
f73c848ee4 detect and error out when timestep was reset when restarting fixes atom/swap, gcmc, or deposit 2019-05-31 00:31:36 -04:00
4243af30d7 properly store 64-bit integers for next_reneighbor into double type buffers for restarts of fixes
also store number of attemps and number of successes in restart and retrieve those from it
2019-05-31 00:23:12 -04:00
9d51ee17b0 change the default for gcc 9.x and beyond to not enable OpenMP by default even if it is found to be supported
this is so that using CMake by default will compile LAMMPS, since gcc 9.x
expects different sharing semantics for constants than previous versions.
2019-05-30 22:23:50 -04:00
c903a110fe fix typo 2019-05-30 18:36:09 -04:00
02e7dd5716 also allow %e in format variables of suffix 2019-05-30 14:52:26 -04:00
1a5c3c6dcb add check that allows only %f and %g conversions in variable format strings 2019-05-30 14:46:07 -04:00
daac3f7102 Merge pull request #1419 from akohlmey/report-uninstalled-pkg-style
Improved error messages when a style is not found
2019-05-30 06:34:56 -04:00
3bf0a4ba63 Merge pull request #1474 from stanmoore1/nl_mem
Don't reallocate views every time in neigh_bond_kokkos
2019-05-30 06:30:54 -04:00
9cc16c4f33 Merge pull request #1479 from akohlmey/fixup_pair_quip
Correctly and fully support pair style hybrid and hybrid/overlay for pair style quip
2019-05-30 06:30:10 -04:00
8dcd6fc48c provide alternative to gettimeofday() for MSVC compilation 2019-05-29 20:13:26 -04:00
a48f1cbf00 fix spelling error 2019-05-29 20:07:00 -04:00
d3cbccff35 whitespace cleanup 2019-05-29 14:42:18 -04:00
29d36ffec0 error out when not using metal units with QUIP 2019-05-29 14:40:09 -04:00
fec2f8f69b update docs for fully supporting hybrid styles 2019-05-29 14:39:45 -04:00
c0cfceb95c fix off-by-one errors 2019-05-29 14:03:00 -04:00
12fcf5f5ef properly set up pair style quip for hybrid and hybrid/overlay 2019-05-29 14:00:33 -04:00
cb8d89855d remove limitation to hybrid/overlay 2019-05-29 13:59:51 -04:00
c8d50c04a4 avoid memory leak and initialize class member pointers 2019-05-29 10:12:24 -04:00
e3e5a962b0 bond/react memory: correctly delete internal groups
internally-created groups should be deleted when unfixing bond/react
groups should not be deleted when LAMMPS exits (because they already have been)
2019-05-28 21:40:01 -06:00