Commit Graph

16446 Commits

Author SHA1 Message Date
b29d526632 Merge pull request #1323 from akohlmey/next-patch-release
Patch release 8 February 2019
patch_8Feb2019
2019-02-08 21:43:39 +01:00
77c24f1b79 Merge branch 'master' into next-patch-release
# Conflicts:
#	.github/PULL_REQUEST_TEMPLATE.md
2019-02-08 15:34:40 -05:00
b4765683da restore generic pull request template (for now) 2019-02-08 15:27:16 -05:00
f286155dd3 Merge pull request #1306 from stanmoore1/kk_angle_cosine
Add Kokkos version of angle/cosine
2019-02-08 21:07:36 +01:00
f04d97e66e Merge pull request #1312 from stanmoore1/kk_update
Update Kokkos library to v2.8.00
2019-02-08 21:07:23 +01:00
b871b4e13d Merge pull request #1321 from akohlmey/collected-small-fixes
Collected small fixes for the next patch release
2019-02-08 17:19:01 +01:00
8b449e569b Merge pull request #1318 from akohlmey/github-template-update
New GitHub PR templates
2019-02-08 17:18:30 +01:00
be6c2d781b Merge pull request #1322 from akohlmey/add-code-of-conduct
Add a code of conduct to lammps github project
2019-02-08 17:18:05 +01:00
a35f407dfc Patch release 8 February 2019 2019-02-08 17:15:22 +01:00
82355342bf improve wording about avoiding namespace imports in headers 2019-02-08 17:08:15 +01:00
773476634b Update Kokkos library in LAMMPS to v2.8.00 2019-02-08 08:50:26 -07:00
1b4ed9cb8d revert region optimization to create_atoms 2019-02-08 16:24:48 +01:00
997727d26c add a code of conduct to github project
complete the "github open source best practices" setup by adapting a
code of conduct for any public communications about LAMMPS on github.
2019-02-08 14:21:37 +01:00
a71159578e fix typo 2019-02-08 02:29:03 -05:00
ae85ca18fc provide multiple and more specific pull request templates 2019-02-07 15:53:46 +01:00
4d192e541e update github contribution guidelines text 2019-02-07 14:58:52 +01:00
8da5289638 add readme file adapted from https://github.com/pmla/polyhedral-template-matching/blob/master/README.md to USER-PTM package 2019-02-07 14:40:52 +01:00
ad8aeb8b00 using POSIX compatible version of strdup() (i.e. _strdup()) on windows 2019-02-07 14:11:02 +01:00
f80c577b3c Merge pull request #1316 from akohlmey/python-portable-header
Rename python.h to lmppython.h
2019-02-07 14:05:49 +01:00
510641c065 Merge pull request #1319 from lammps/akohlmey-new-issue-templates
Update issue templates to have a different template for bug reports and feature requests.
2019-02-07 14:02:10 +01:00
019e534f80 some small tweaks, fixes for typos, and url corrections for the manual 2019-02-07 01:16:48 -05:00
ebcbc5bdbd fix some formatting and spelling/grammar errors in bug report template 2019-02-06 17:32:44 -05:00
c9a7513dc6 remove outdated generic issue template 2019-02-06 17:26:59 -05:00
17cd92a3f2 Update issue templates
Take advantage of the fact, that GitHub now allows to have separate issue templates for bug reports and feature requests
2019-02-06 17:15:52 -05:00
0c4e76ce84 bugfix for fix qeq/reax to make it usable without pair reax/c 2019-02-05 11:55:02 +01:00
7e1f760b72 rename python.h to lmppython.h and correspondingly python.cpp to lmppython.cpp 2019-02-04 14:24:53 -05:00
b417cfda9b removed dead code and reduce compiler warnings about unused parameters 2019-02-03 11:36:41 -05:00
64834e4a3d Update Kokkos library 2019-02-01 12:45:54 -07:00
d6eaf73db1 Merge pull request #1307 from akohlmey/next-patch-release
Patch release 1 February 2019
patch_1Feb2019
2019-02-01 20:22:18 +01:00
2b5073fb90 Merge pull request #1311 from akohlmey/correct-delete-callback
Correct calls to atom->delete_callback()
2019-02-01 17:25:25 +01:00
f2a977884c Merge pull request #1290 from akohlmey/python-script-portability
Use argparse module in for Install.py scripts in lib and further portability and consistency enhancements. Some lint removal as well.
2019-02-01 01:18:40 +01:00
bc2eeaf22a remove extraneous atom->delete_callback() 2019-01-31 19:10:14 -05:00
5c927d484e add missing atom->delete_callback() 2019-01-31 19:09:59 -05:00
8ee1fefe19 add pointer to README and Manual to help. 2019-01-31 18:46:43 -05:00
763dda64af update lib/gpu/README to current state 2019-01-31 18:45:17 -05:00
a9f8b17cbd Merge pull request #1282 from akohlmey/collected-small-changes
Collected small changes and bugfixes for the next patch release
2019-02-01 00:24:15 +01:00
f28ab59695 output bounding box info for regions, if present 2019-01-31 18:12:56 -05:00
2e60e461a0 must convert regions bounding box to lattice coordinates before checking to reduce lattice creation range 2019-01-31 18:12:37 -05:00
d6a918f4fd Merge pull request #1270 from akohlmey/get-moltemplate-from-web
Replace bundled moltemplate distribution with installation instructions only
2019-01-31 22:58:31 +01:00
7606529f03 Merge pull request #1302 from akohlmey/combined-user-fep-soft-updates
Combined USER-FEP related updates
2019-01-31 22:57:51 +01:00
cdb07f9f06 Merge pull request #1310 from akohlmey/reaxc-with-qeq-shielded
Support using fix qeq/shielded with pair style reax/c
2019-01-31 22:57:31 +01:00
0cce3387bb Merge pull request #1285 from Adrian-Diaz/4D-grow-memory
Added 4D memory grow routine
2019-01-31 17:32:45 +01:00
a93d8dda3c add example input and logfiles for using fix qeq/shielded with pair style reax/c 2019-01-31 14:14:29 +01:00
327ca344ff make fix qeq/shielded fully compatible with pair style reax/c as a replacement for fix qeq/reax 2019-01-31 13:49:05 +01:00
c5256624e8 document coul/streitz and reax/c keywords to extract qeq parameters from pair styles 2019-01-31 13:48:06 +01:00
ae6fb92478 whitespace cleanup 2019-01-31 12:02:43 +01:00
14ab0ec459 remove references to pre-installed packages as this was changed with the 22 August 2018 version 2019-01-31 12:02:22 +01:00
8338969af5 bugfix for create_atoms region optimization 2019-01-31 11:46:03 +01:00
ef5c327f74 Merge branch 'master' into collected-small-changes 2019-01-31 11:45:15 +01:00
06d5c1d62f Merge pull request #1279 from akohlmey/create-atoms-bounding-box
Optimize performance of create_atoms for large boxes and small regions
2019-01-31 09:39:55 +01:00