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@ -1641,9 +1641,9 @@ Procedures Bound to the :f:type:`lammps` Derived Type
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.. versionadded:: TBD
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This function copies the list of all dihedrals into an allocatable array.
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The array will be filled with (dihedral type, dihedral atom 1, dihedral atom 2,
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dihedral atom 3, dihedral atom 4) for each dihedral. The array is allocated to
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the right length (i.e., five times the number of dihedrals).
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The array will be filled with (dihedral type, dihedral atom 1, dihedral atom 2,
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dihedral atom 3, dihedral atom 4) for each dihedral. The array is allocated to
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the right length (i.e., five times the number of dihedrals).
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The array *data* must be of the same type as the LAMMPS
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``tagint`` type, which is equivalent to either ``INTEGER(c_int)`` or
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``INTEGER(c_int64_t)``, depending on whether ``-DLAMMPS_BIGBIG`` was used
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@ -1687,9 +1687,9 @@ Procedures Bound to the :f:type:`lammps` Derived Type
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.. versionadded:: TBD
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This function copies the list of all impropers into an allocatable array.
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The array will be filled with (improper type, improper atom 1, improper atom 2,
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improper atom 3, improper atom 4) for each improper. The array is allocated to
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the right length (i.e., five times the number of impropers).
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The array will be filled with (improper type, improper atom 1, improper atom 2,
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improper atom 3, improper atom 4) for each improper. The array is allocated to
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the right length (i.e., five times the number of impropers).
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The array *data* must be of the same type as the LAMMPS
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``tagint`` type, which is equivalent to either ``INTEGER(c_int)`` or
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``INTEGER(c_int64_t)``, depending on whether ``-DLAMMPS_BIGBIG`` was used
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@ -217,8 +217,8 @@ class lammps(object):
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self.lib.lammps_gather_dihedrals.restype = None
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self.lib.lammps_gather_impropers.argtypes = [c_void_p,c_void_p]
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self.lib.lammps_gather_impropers.restype = None
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self.lib.lammps_gather_impropers.restype = None
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self.lib.lammps_gather.argtypes = [c_void_p,c_char_p,c_int,c_int,c_void_p]
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self.lib.lammps_gather.restype = None
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@ -1330,7 +1330,7 @@ class lammps(object):
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return nangles,data
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# -------------------------------------------------------------------------
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def gather_dihedrals(self):
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"""Retrieve global list of dihedrals
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@ -1375,8 +1375,8 @@ class lammps(object):
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self.lib.lammps_gather_impropers(self.lmp,data)
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return nimpropers,data
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# -------------------------------------------------------------------------
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# -------------------------------------------------------------------------
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# return vector of atom/compute/fix properties gathered across procs
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# 3 variants to match src/library.cpp
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# name = atom property recognized by LAMMPS in atom->extract()
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@ -3275,7 +3275,7 @@ void lammps_gather_angles(void *handle, void *data)
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This function copies the list of all dihedrals into a buffer provided by
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the calling code. The buffer will be filled with dihedral type, dihedral atom 1,
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dihedral atom 2, dihedral atom 3, dihedral atom 4 for each dihedral.
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dihedral atom 2, dihedral atom 3, dihedral atom 4 for each dihedral.
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Thus the buffer has to be allocated to the
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dimension of 5 times the **total** number of dihedrals times the size of
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the LAMMPS "tagint" type, which is either 4 or 8 bytes depending on
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@ -3386,7 +3386,7 @@ void lammps_gather_dihedrals(void *handle, void *data)
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This function copies the list of all impropers into a buffer provided by
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the calling code. The buffer will be filled with improper type, improper atom 1,
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improper atom 2, improper atom 3, improper atom 4 for each improper.
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improper atom 2, improper atom 3, improper atom 4 for each improper.
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Thus the buffer has to be allocated to the
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dimension of 5 times the **total** number of impropers times the size of
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the LAMMPS "tagint" type, which is either 4 or 8 bytes depending on
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