dead code removal

src/COLLOID/pair_brownian.cpp

@@ -92,7 +92,6 @@ void PairBrownian::compute(int eflag, int vflag)
   double prethermostat;
   double xl[3], a_sq, a_sh, a_pu, Fbmag;
   double p1[3], p2[3], p3[3];
-  int overlaps = 0;
 
   // This section of code adjusts R0/RT0/RS0 if necessary due to changes
   // in the volume fraction as a result of fix deform or moving walls
@@ -187,10 +186,6 @@ void PairBrownian::compute(int eflag, int vflag)
 
         h_sep = r - 2.0 * radi;
 
-        // check for overlaps
-
-        if (h_sep < 0.0) overlaps++;
-
         // if less than minimum gap, use minimum gap instead
 
         if (r < cut_inner[itype][jtype]) h_sep = cut_inner[itype][jtype] - 2.0 * radi;
@@ -336,9 +331,6 @@ void PairBrownian::compute(int eflag, int vflag)
     }
   }
 
-  int print_overlaps = 0;
-  if (print_overlaps && overlaps) printf("Number of overlaps=%d\n", overlaps);
-
   if (vflag_fdotr) virial_fdotr_compute();
 }
 

src/COLLOID/pair_brownian_poly.cpp

@@ -72,7 +72,6 @@ void PairBrownianPoly::compute(int eflag, int vflag)
   int nlocal = atom->nlocal;
 
   double vxmu2f = force->vxmu2f;
-  int overlaps = 0;
   double randr;
   double prethermostat;
   double xl[3],a_sq,a_sh,a_pu,Fbmag;
@@ -176,10 +175,6 @@ void PairBrownianPoly::compute(int eflag, int vflag)
 
         h_sep = r - radi-radj;
 
-        // check for overlaps
-
-        if (h_sep < 0.0) overlaps++;
-
         // if less than minimum gap, use minimum gap instead
 
         if (r < cut_inner[itype][jtype])

src/DIFFRACTION/fix_saed_vtk.cpp

@@ -407,7 +407,6 @@ void FixSAEDVTK::invoke_vector(bigint ntimestep)
 
     // Finding the intersection of the reciprical space and Ewald sphere
     int NROW1 = 0;
-    int NROW2 = 0;
     double dinv2 = 0.0;
     double r = 0.0;
     double K[3];
@@ -425,11 +424,9 @@ void FixSAEDVTK::invoke_vector(bigint ntimestep)
               fprintf(fp,"%g\n",vector_total[NROW1]/norm);
               fflush(fp);
               NROW1++;
-              NROW2++;
             } else {
               fprintf(fp,"%d\n",-1);
               fflush(fp);
-              NROW2++;
             }
           }
         }
@@ -449,17 +446,14 @@ void FixSAEDVTK::invoke_vector(bigint ntimestep)
               if  ( (r >  (R_Ewald - dR_Ewald) ) && (r < (R_Ewald + dR_Ewald) )) {
                 fprintf(fp,"%g\n",vector_total[NROW1]/norm);
                 fflush(fp);
-                NROW2++;
                 NROW1++;
               } else {
                 fprintf(fp,"%d\n",-1);
                 fflush(fp);
-                NROW2++;
               }
             } else {
               fprintf(fp,"%d\n",-1);
               fflush(fp);
-              NROW2++;
             }
           }
         }

src/EXTRA-COMPUTE/compute_basal_atom.cpp

@@ -31,7 +31,6 @@
 #include "update.h"
 
 #include <cmath>
-#include <cstring>
 
 using namespace LAMMPS_NS;
 

src/EXTRA-COMPUTE/compute_born_matrix.cpp

@@ -33,10 +33,8 @@
 #include "modify.h"
 #include "molecule.h"
 #include "neigh_list.h"
-#include "neigh_request.h"
 #include "neighbor.h"
 #include "pair.h"
-#include "universe.h"
 #include "update.h"
 
 #include <cmath>

src/EXTRA-COMPUTE/compute_born_matrix.h

@@ -1,7 +1,7 @@
 /* ----------------------------------------------------------------------
    LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
-   http://www.lammps.org/, Sandia National Laboratories
-   Steve Plimpton, sjplimp@sandia.gov
+   https://www.lammps.org/, Sandia National Laboratories
+   LAMMPS development team: developers@lammps.org
 
    Copyright (2003) Sandia Corporation.  Under the terms of Contract
    DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains