add version tags, sort out spelling issues
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@ -268,7 +268,7 @@ The individual style names on the :doc:`Commands compute <Commands_compute>` pag
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* :doc:`property/grid <compute_property_grid>` - convert per-grid attributes to per-grid vectors/arrays
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* :doc:`property/local <compute_property_local>` - convert local attributes to local vectors/arrays
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* :doc:`ptm/atom <compute_ptm_atom>` - determines the local lattice structure based on the Polyhedral Template Matching method
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* :doc:`rattlers <compute_rattlers>` - identify undercoordinated rattler atoms
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* :doc:`rattlers <compute_rattlers>` - identify under-coordinated rattler atoms
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* :doc:`rdf <compute_rdf>` - radial distribution function :math:`g(r)` histogram of group of atoms
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* :doc:`reduce <compute_reduce>` - combine per-atom quantities into a single global value
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* :doc:`reduce/chunk <compute_reduce_chunk>` - reduce per-atom quantities within each chunk
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@ -32,8 +32,10 @@ Examples
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Description
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"""""""""""
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.. versionadded:: TBD
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Define a compute that identifies rattlers in a system. Rattlers are
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identified using an interative approach. The coordination number of
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identified using an interactive approach. The coordination number of
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all atoms is first calculated. The *type* and *radius* settings are
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used to select whether interaction cutoffs are determined by atom
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types or by the sum of atomic radii (atom style sphere), respectively.
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@ -275,7 +275,7 @@ accelerated styles exist.
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* :doc:`mvv/tdpd <fix_mvv_dpd>` - constant temperature DPD using the modified velocity-Verlet algorithm
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* :doc:`neb <fix_neb>` - nudged elastic band (NEB) spring forces
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* :doc:`neb/spin <fix_neb_spin>` - nudged elastic band (NEB) spring forces for spins
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* :doc:`nonaffine/displacement <fix_nonaffine_displacement>` - calculate nonaffined displacement of atoms
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* :doc:`nonaffine/displacement <fix_nonaffine_displacement>` - calculate nonaffine displacement of atoms
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* :doc:`nph <fix_nh>` - constant NPH time integration via Nose/Hoover
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* :doc:`nph/asphere <fix_nph_asphere>` - NPH for aspherical particles
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* :doc:`nph/body <fix_nph_body>` - NPH for body particles
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@ -44,6 +44,8 @@ Examples
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Description
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"""""""""""
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.. versionadded:: TBD
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This fix computes different metrics of the nonaffine displacement of
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particles. The first metric, *d2min* calculates the :math:`D^2_\mathrm{min}`
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nonaffine displacement by Falk and Langer in :ref:`(Falk) <d2min-Falk>`.
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@ -1073,6 +1073,7 @@ facesets
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factorizable
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factorizations
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Fahrenberger
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Falk
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Faken
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Farago
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Fasolino
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@ -1816,6 +1817,7 @@ Lanczos
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Lande
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Landron
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Landsgesell
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Langer
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langevin
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Langevin
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Langston
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@ -2491,6 +2493,7 @@ noforce
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noguess
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Noid
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nolib
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nonaffine
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nonequilibrium
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nongauss
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nonGaussian
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@ -2563,6 +2566,7 @@ nthreads
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ntimestep
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Ntptask
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Ntriples
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ntries
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ntris
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Ntype
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ntypes
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