add version tags, sort out spelling issues

This commit is contained in:
Axel Kohlmeyer
2023-08-18 06:52:21 -04:00
parent bb2c286f27
commit 67f42fa84f
5 changed files with 11 additions and 3 deletions

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@ -268,7 +268,7 @@ The individual style names on the :doc:`Commands compute <Commands_compute>` pag
* :doc:`property/grid <compute_property_grid>` - convert per-grid attributes to per-grid vectors/arrays
* :doc:`property/local <compute_property_local>` - convert local attributes to local vectors/arrays
* :doc:`ptm/atom <compute_ptm_atom>` - determines the local lattice structure based on the Polyhedral Template Matching method
* :doc:`rattlers <compute_rattlers>` - identify undercoordinated rattler atoms
* :doc:`rattlers <compute_rattlers>` - identify under-coordinated rattler atoms
* :doc:`rdf <compute_rdf>` - radial distribution function :math:`g(r)` histogram of group of atoms
* :doc:`reduce <compute_reduce>` - combine per-atom quantities into a single global value
* :doc:`reduce/chunk <compute_reduce_chunk>` - reduce per-atom quantities within each chunk

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@ -32,8 +32,10 @@ Examples
Description
"""""""""""
.. versionadded:: TBD
Define a compute that identifies rattlers in a system. Rattlers are
identified using an interative approach. The coordination number of
identified using an interactive approach. The coordination number of
all atoms is first calculated. The *type* and *radius* settings are
used to select whether interaction cutoffs are determined by atom
types or by the sum of atomic radii (atom style sphere), respectively.

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@ -275,7 +275,7 @@ accelerated styles exist.
* :doc:`mvv/tdpd <fix_mvv_dpd>` - constant temperature DPD using the modified velocity-Verlet algorithm
* :doc:`neb <fix_neb>` - nudged elastic band (NEB) spring forces
* :doc:`neb/spin <fix_neb_spin>` - nudged elastic band (NEB) spring forces for spins
* :doc:`nonaffine/displacement <fix_nonaffine_displacement>` - calculate nonaffined displacement of atoms
* :doc:`nonaffine/displacement <fix_nonaffine_displacement>` - calculate nonaffine displacement of atoms
* :doc:`nph <fix_nh>` - constant NPH time integration via Nose/Hoover
* :doc:`nph/asphere <fix_nph_asphere>` - NPH for aspherical particles
* :doc:`nph/body <fix_nph_body>` - NPH for body particles

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@ -44,6 +44,8 @@ Examples
Description
"""""""""""
.. versionadded:: TBD
This fix computes different metrics of the nonaffine displacement of
particles. The first metric, *d2min* calculates the :math:`D^2_\mathrm{min}`
nonaffine displacement by Falk and Langer in :ref:`(Falk) <d2min-Falk>`.

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@ -1073,6 +1073,7 @@ facesets
factorizable
factorizations
Fahrenberger
Falk
Faken
Farago
Fasolino
@ -1816,6 +1817,7 @@ Lanczos
Lande
Landron
Landsgesell
Langer
langevin
Langevin
Langston
@ -2491,6 +2493,7 @@ noforce
noguess
Noid
nolib
nonaffine
nonequilibrium
nongauss
nonGaussian
@ -2563,6 +2566,7 @@ nthreads
ntimestep
Ntptask
Ntriples
ntries
ntris
Ntype
ntypes