rename doc file to be more generic and match the examples folder
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@ -142,11 +142,11 @@ KOKKOS, o = OPENMP, t = OPT.
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* :doc:`sph/t/atom <compute_sph_t_atom>`
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* :doc:`spin <compute_spin>`
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* :doc:`stress/atom <compute_stress_atom>`
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* :doc:`stress/cartesian <compute_stress_cartesian>`
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* :doc:`stress/cylinder <compute_stress_cartesian>`
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* :doc:`stress/cartesian <compute_stress_profile>`
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* :doc:`stress/cylinder <compute_stress_profile>`
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* :doc:`stress/mop <compute_stress_mop>`
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* :doc:`stress/mop/profile <compute_stress_mop>`
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* :doc:`stress/spherical <compute_stress_cartesian>`
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* :doc:`stress/spherical <compute_stress_profile>`
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* :doc:`stress/tally <compute_tally>`
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* :doc:`tdpd/cc/atom <compute_tdpd_cc_atom>`
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* :doc:`temp (k) <compute_temp>`
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@ -288,11 +288,11 @@ The individual style names on the :doc:`Commands compute <Commands_compute>` pag
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* :doc:`sph/t/atom <compute_sph_t_atom>` - per-atom internal temperature of Smooth-Particle Hydrodynamics atoms
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* :doc:`spin <compute_spin>` - magnetic quantities for a system of atoms having spins
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* :doc:`stress/atom <compute_stress_atom>` - stress tensor for each atom
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* :doc:`stress/cartesian <compute_stress_cartesian>` - stress tensor in cartesian coordinates
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* :doc:`stress/cylinder <compute_stress_cartesian>` - stress tensor in cylindrical coordinates
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* :doc:`stress/cartesian <compute_stress_profile>` - stress tensor in cartesian coordinates
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* :doc:`stress/cylinder <compute_stress_profile>` - stress tensor in cylindrical coordinates
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* :doc:`stress/mop <compute_stress_mop>` - normal components of the local stress tensor using the method of planes
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* :doc:`stress/mop/profile <compute_stress_mop>` - profile of the normal components of the local stress tensor using the method of planes
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* :doc:`stress/spherical <compute_stress_cartesian>` - stress tensor in spherical coordinates
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* :doc:`stress/spherical <compute_stress_profile>` - stress tensor in spherical coordinates
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* :doc:`stress/tally <compute_tally>` - stress between two groups of atoms via the tally callback mechanism
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* :doc:`tdpd/cc/atom <compute_tdpd_cc_atom>` - per-atom chemical concentration of a specified species for each tDPD particle
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* :doc:`temp <compute_temp>` - temperature of group of atoms
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@ -73,7 +73,7 @@ command, since those are contributions to the global system pressure.
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NOTE 3: The local stress profile generated by compute *stress/mop/profile*
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is similar to that obtained by compute
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:doc:`stress/cartesian <compute_stress_cartesian>`.
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:doc:`stress/cartesian <compute_stress_profile>`.
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A key difference
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is that compute *stress/mop/profile* considers particles
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crossing a set of planes,
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@ -122,7 +122,7 @@ intra-molecular interactions, and long range (kspace) interactions.
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Related commands
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""""""""""""""""
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:doc:`compute stress/atom <compute_stress_atom>`, :doc:`compute pressure <compute_pressure>`, :doc:`compute stress/cartesian <compute_stress_cartesian>`, :doc:`compute stress/cylinder <compute_stress_cartesian>`, :doc:`compute stress/spherical <compute_stress_cartesian>`
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:doc:`compute stress/atom <compute_stress_atom>`, :doc:`compute pressure <compute_pressure>`, :doc:`compute stress/cartesian <compute_stress_profile>`, :doc:`compute stress/cylinder <compute_stress_profile>`, :doc:`compute stress/spherical <compute_stress_profile>`
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Default
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"""""""
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