The mergePatchPairs functionality in blockMesh also now uses patchIntersection.
The new mergePatchPairs and patchIntersection replaces the old, fragile and
practically unusable polyTopoChanger::slidingInterface functionality the removal
of which has allowed the deletion of a lot of other ancient and otherwise unused
clutter including polyTopoChanger, polyMeshModifier, polyTopoChange::setAction
and associated addObject/*, modifyObject/* and removeObject/*. This
rationalisation paves the way for the completion of the update of zone handling
allowing mesh points, faces and cells to exist in multiple zones which is
currently not supported with mesh topology change.
Application
stitchMesh
Description
Utility to stitch or conform pairs of patches,
converting the patch faces either into internal faces
or conformal faces or another patch.
Usage
\b stitchMesh (\<list of patch pairs\>)
E.g. to stitch patches \c top1 to \c top2 and \c bottom1 to \c bottom2
stitchMesh "((top1 top2) (bottom1 bottom2))"
Options:
- \par -overwrite \n
Replace the old mesh with the new one, rather than writing the new one
into a separate time directory
- \par -region \<name\>
Specify an alternative mesh region.
- \par -fields
Update vol and point fields
- \par -tol
Merge tolerance relative to local edge length (default 1e-4)
See also
Foam::mergePatchPairs
Omega lower limit bounding is now based on a maximum turbulence viscosity nut
rather than a minimum omega value which improves stability and robustness of
the k-omega models in case of numerical boundedness problems.
The maximum nut value is calculated by multiplying the laminar viscosity by
nutMaxCoeff which defaults to 1e5 but can be set by the user in the
momentumTransport dictionary.
The legacy fvMeshTopoChangersMovingCone removed, replaced by the more general
mesh mapping approach, see tutorials incompressibleFluid/movingCone and
shockFluid/movingCone.
All property functions in the low-level templated thermo property
implementations and the high-level virtual interfaces have been made
consistent. All energies and enthalpies are lower case to denote that
they are specific quantities. Molar functions have been removed as these
are no longer used anywhere.
These classes permit any PtrList of region-associated objects (meshes,
solvers, domainDecompositions, ...) to prefix the region name to the log.
At present these classes are used by decomposePar and reconstructPar
only. The foamMultiRun solver still handles its own prefixing.
The directFieldMapper has been renamed to forwardFieldMapper, and
instances where generalFieldMapper was used instead of a more simple
forward/direct type have been removed.
The patch-specific mapper interfaces, fvPatchFieldMapper and
pointPatchFieldMapper, have been removed as they did not do anything.
Patch mapping constructors and functions now take a basic fieldMapper
reference.
An fvPatchFieldMapper.H header has been provided to aid backwards
compatability so that existing custom boundary conditions continue to
compile.
This lets calling code determine the difference between a polyMesh
topology change and a re-stitch. This prevents unnecessary
post-processing output in a few cases when using NCC; most notably the
generation of cellProc fields by reconstructPar.
Previously this was creating simple processorCyclic fields on the
nonConformalProcessorCyclic patches using a patchType override. The fact
that this worked is an encouraging indication of the system's
robustness, but it is more logical to create a field which directly
corresponds to the underlying patch type.
A number of fixes have been made in order to make non-conformal cyclic
patches compatible with run-time distribution.
A tutorial case, incompressibleVoF/rotatingCube, has been added which
demonstrates simultaneous usage of motion, non-conformal couplings,
adaptive refinement and load-balancing.
Now both the checkMesh utility and functionObject operate in the same manner
with the same controls, executing the same checkGeometry and checkTopology
functions from the new meshCheck library. The controls have been updated and
made more consistent and flexible, in particular by the addition of optional
user specification for the non-orthogonality and skewness error thresholds:
Application
checkMesh
Description
Checks validity of a mesh.
Usage
\b checkMesh [OPTION]
Options:
- \par noTopology
Skip checking the mesh topology
- \par -allTopology
Check all (including non finite-volume specific) addressing
- \par -allGeometry
Check all (including non finite-volume specific) geometry
- \par -meshQuality
Check against user defined (in \a system/meshQualityDict) quality
settings
- \par -region \<name\>
Specify an alternative mesh region.
- \par -writeSurfaces
Reconstruct cellSets and faceSets of problem faces and write to
postProcessing directory.
- \par -surfaceFormat <format>
Format used to write the cellSets and faceSets surfaces
e.g. vtk or ensight.
- \par -writeSets
Reconstruct pointSets of problem points nd write to
postProcessing directory.
- \par -setFormat <format>
Format used to write the pointSets
e.g. vtk or ensight.
- \par -nonOrthThreshold <threshold value in degrees>
Threshold in degrees for reporting non-orthogonality errors,
default: 70"
- \par -skewThreshold <threshold value>
Threshold for reporting skewness errors, default: 4.
Class
Foam::functionObjects::checkMesh
Description
Executes primitiveMesh::checkMesh(true) every execute time for which the
mesh changed, i.e. moved or changed topology.
Useful to check the correctness of changing and morphing meshes.
Usage
\table
Property | Description | Required | Default value
type | type name: checkMesh | yes |
noTopology | Skip checking the mesh topology | no | false
allTopology | Check all addressing | no | false
allGeometry | Check all geometry | no | false
writeSurfaces | Reconstruct and write problem faces | no | false
surfaceFormat | Format for problem faceSets | no | vtk
writeSets | Reconstruct and write problem points | no | false
setFormat | Format used to write the problem pointSets | no | vtk
nonOrthThreshold | Threshold for non-orthogonality errors | no | 70 deg
skewThreshold | Threshold for reporting skewness errors | no | 4
\endtable
Example of checkMesh specification:
\verbatim
checkMesh
{
type checkMesh;
libs ("libutilityFunctionObjects.so");
executeControl timeStep;
executeInterval 10;
allGeometry true;
allTopology true;
writeSurfaces true;
surfaceFormat vtk;
writeSets true;
setFormat vtk;
}
\endverbatim
or using the standard configuration file:
\verbatim
#includeFunc checkMesh(executeInterval=10, allGeometry=true)
\endverbatim
When an fvModel source introduces fluid into a simulation it should also
create a corresponding source term for all properties transported into
the domain by that injection. The source is, effectively, an alternative
form of inlet boundary, on which all transported properties need an
inlet value specified.
These values are now specified in the property field files. The
following is an example of a 0/U file in which the velocity of fluid
introduced by a fvModel source called "injection1" is set to a fixed
value of (-1 0 0):
dimensions [0 1 -1 0 0 0 0];
internalField uniform (0 0 0);
boundaryField
{
#includeEtc "caseDicts/setConstraintTypes"
wall
{
type noSlip;
}
atmosphere
{
type pressureInletOutletVelocity;
value $internalField;
}
}
// *** NEW ***
sources
{
injection1
{
type uniformFixedValue;
uniformValue (-1 0 0);
}
}
And the following entry in the 0/k file specifies the turbulent kinetic
energy introduced as a fraction of the mean flow kinetic energy:
sources
{
injection1
{
type turbulentIntensityKineticEnergy;
intensity 0.05;
}
}
The specification is directly analogous to boundary conditions. The
conditions are run-time selectable and can be concisely implemented.
They can access each other and be inter-dependent (e.g., the above,
where turbulent kinetic energy depends on velocity). The syntax keeps
field data localised and makes the source model (e.g., massSource,
volumeSource, ...) specification independent from what other models and
fields are present in the simulation. The 'fieldValues' entry previously
required by source models is now no longer required.
If source values need specifying and no source condition has been
supplied in the relevant field file then an error will be generated.
This error is similar to that generated for missing boundary conditions.
This replaces the behaviour where sources such as these would introduce
a value of zero, either silently or with a warning. This is now
considered unacceptable. Zero might be a tolerable default for certain
fields (U, k), but is wholly inappropriate for others (T, epsilon, rho).
This change additionally makes it possible to inject fluid into a
multicomponent solver with a specified temperature. Previously, it was
not possible to do this as there was no means of evaluating the energy
of fluid with the injected composition.
Warnings about initialisation of particles with locations outside of the
mesh and about the positional inaccuracy of NCC transfers are now
accumulated and printed once per time-step. This way, the log isn't
obscured by hundreds of such warnings.
Also, the pattern in which warnings are silenced after some arbitrary
number (typically 100) have been issued has been removed. This pattern
means that user viewing the log later in the run may be unaware that a
problem is still present. Accumulated warnings are concise enough that
they do not need to be silenced. They are generated every time-step, and
so remain visible throughout the log.
to specify the path name of the output dictionary to which the expanded and/or
changed dictionary is written.
Usage: foamDictionary [OPTIONS] <dictionary file>
options:
-add <value> Add a new entry
-case <dir> specify alternate case directory, default is the cwd
-dict Set, add or merge entry from a dictionary.
-diff <dict> Write differences with respect to the specified dictionary
-entry <name> report/select the named entry
-expand Read the specified dictionary file and expand the macros
etc.
-fileHandler <handler>
override the fileHandler
-hostRoots <((host1 dir1) .. (hostN dirN))>
slave root directories (per host) for distributed running
-includes List the #include/#includeIfPresent files to standard output
-keywords list keywords
-libs '("lib1.so" ... "libN.so")'
pre-load libraries
-merge <value> Merge entry
-noFunctionObjects
do not execute functionObjects
-output <path name>
Path name of the output dictionary
-parallel run in parallel
-remove Remove the entry.
-roots <(dir1 .. dirN)>
slave root directories for distributed running
-set <value> Set entry value, add new entry or apply list of
substitutions
-value Print entry value
-writePrecision <label>
Write with the specified precision
-srcDoc display source code in browser
-doc display application documentation in browser
-help print the usage
manipulates dictionaries
Now if the -case option is specified the dictionary path provided is treated as
relative to the case path, e.g.
foamDictionary -expand -case shockFluid/shockTube system/controlDict
The functionality necessary to write in a different unit set has been
removed. This was excessivelty complex, never used in practice, and of
little practical usage. Output numeric data, in general, is not designed
to be conveniently user-readable, so it is not important what unit
system it is written in.
DecomposePar and reconstructPar now interleave the processing of
multiple regions. This means that with the -allRegions option, the
earlier times are completed in their entirety before later times are
considered. It also lets regions to access each other during
decomposition and reconstruction, which will be important for
non-conformal region interfaces.
To aid interpretation of the log, region prefixing is now used by both
utilities in the same way as is done by foamMultiRun.
DecomposePar has been overhauled so that it matches reconstructPar much
more closely, both in terms of output and of iteration sequence. All
meshes and addressing are loaded simultaneously and each field is
considered in turn. Previously, all the fields were loaded, and each
process and addressing set was considered in turn. This new strategy
optimises memory usage for cases with lots of fields.
