Merge branch 'master' of /home/dm4/OpenFOAM/OpenFOAM-dev

This commit is contained in:
andy
2013-06-11 11:18:00 +01:00
237 changed files with 3321 additions and 23571 deletions

View File

@ -26,21 +26,18 @@ Application
Description
Combination of heatConductionFoam and buoyantFoam for conjugate heat
transfer between a solid region and fluid region. It includes
porous media in the primary fluid region treated explicitly.
transfer between solid regions and fluid regions. Both regions include
the fvOptions framework.
It handles secondary fluid or solid circuits which can be coupled
thermally with the main fluid region. i.e radiators, etc.
The secondary fluid region is
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "rhoThermo.H"
#include "turbulenceModel.H"
#include "fixedGradientFvPatchFields.H"
#include "zeroGradientFvPatchFields.H"
#include "regionProperties.H"
#include "compressibleCourantNo.H"
#include "solidRegionDiffNo.H"

View File

@ -30,7 +30,7 @@ Description
Sub-models include:
- turbulence modelling, i.e. laminar, RAS or LES
- run-time selectable finitie volume options, e.g. MRF, explicit porosity
- run-time selectable finite volume options, e.g. MRF, explicit porosity
\*---------------------------------------------------------------------------*/

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@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -117,6 +117,30 @@ int main(int argc, char *argv[])
<< " agglomerated size : "
<< returnReduce(coarseSize, sumOp<label>()) << endl;
labelList newAddr;
label newCoarseSize = 0;
bool ok = GAMGAgglomeration::checkRestriction
(
newAddr,
newCoarseSize,
agglom.meshLevel(level).lduAddr(),
addr,
coarseSize
);
if (!ok)
{
WarningIn(args.executable())
<< "At level " << level
<< " there are " << coarseSize
<< " agglomerated cells but " << newCoarseSize
<< " disconnected regions" << endl
<< " This means that some agglomerations (coarse cells)"
<< " consist of multiple disconnected regions."
<< endl;
}
forAll(addr, fineI)
{
const labelList& cellLabels = coarseToCell[fineI];

View File

@ -116,17 +116,19 @@ int main(int argc, char *argv[])
squareMatrix[2][1] = -43;
squareMatrix[2][2] = 98;
const scalarSquareMatrix squareMatrixCopy = squareMatrix;
Info<< nl << "Square Matrix = " << squareMatrix << endl;
scalarDiagonalMatrix rhs(3, 0);
rhs[0] = 1;
rhs[1] = 2;
rhs[2] = 3;
Info<< "det = " << det(squareMatrixCopy) << endl;
LUsolve(squareMatrix, rhs);
labelList rhs(3, 0);
label sign;
LUDecompose(squareMatrix, rhs, sign);
Info<< "Decomposition = " << squareMatrix << endl;
Info<< "Solution = " << rhs << endl;
Info<< "Pivots = " << rhs << endl;
Info<< "Sign = " << sign << endl;
Info<< "det = " << detDecomposed(squareMatrix, sign) << endl;
}
Info<< "\nEnd\n" << endl;

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@ -12,7 +12,7 @@ wmake snappyHexMesh
if [ -d "$CGAL_ARCH_PATH" ]
then
foamyHexMesh/Allwmake
foamyHex2DMesh/Allwmake
foamyQuadMesh/Allwmake
fi
# ----------------------------------------------------------------- end-of-file

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@ -194,12 +194,24 @@ void Foam::conformalVoronoiMesh::insertPoints
}
}
label preReinsertionSize(number_of_vertices());
rangeInsertWithInfo
(
vertices.begin(),
vertices.end(),
true
false
);
const label nReinserted = returnReduce
(
label(number_of_vertices()) - preReinsertionSize,
sumOp<label>()
);
Info<< " Reinserted " << nReinserted << " vertices out of "
<< returnReduce(vertices.size(), sumOp<label>())
<< endl;
}
@ -787,8 +799,8 @@ Foam::face Foam::conformalVoronoiMesh::buildDualFace
<< "Dual face uses circumcenter defined by a "
<< "Delaunay tetrahedron with no internal "
<< "or boundary points. Defining Delaunay edge ends: "
<< topoint(vA->point()) << " "
<< topoint(vB->point()) << nl
<< vA->info() << " "
<< vB->info() << nl
<< exit(FatalError);
}
@ -1630,6 +1642,8 @@ void Foam::conformalVoronoiMesh::move()
);
}
DynamicList<Vertex_handle> pointsToRemove;
for
(
Delaunay::Finite_vertices_iterator vit = finite_vertices_begin();
@ -1640,15 +1654,18 @@ void Foam::conformalVoronoiMesh::move()
if
(
(vit->internalPoint() || vit->internalBoundaryPoint())
&& !vit->referred()
//&& !vit->referred()
)
{
bool inside = geometryToConformTo_.inside
(
topoint(vit->point())
);
const Foam::point& pt = topoint(vit->point());
if (!inside)
bool inside = geometryToConformTo_.inside(pt);
if
(
!inside
|| !geometryToConformTo_.globalBounds().contains(pt)
)
{
if
(
@ -1658,13 +1675,16 @@ void Foam::conformalVoronoiMesh::move()
{
str().write(topoint(vit->point()));
}
remove(vit);
pointsToRemove.append(vit);
internalPtIsOutside++;
}
}
}
Info<< " " << internalPtIsOutside
remove(pointsToRemove.begin(), pointsToRemove.end());
Info<< " " << returnReduce(internalPtIsOutside, sumOp<label>())
<< " internal points were inserted outside the domain. "
<< "They have been removed." << endl;
}

View File

@ -317,7 +317,7 @@ private:
void insertPoints
(
List<Vb>& vertices,
bool distribute = true
bool distribute
);
//- Create a point-pair at a ppDist distance either side of
@ -764,6 +764,7 @@ private:
pointIndexHitAndFeatureDynList& featureEdgeHits,
DynamicList<label>& surfaceToTreeShape,
DynamicList<label>& edgeToTreeShape,
Map<scalar>& surfacePtToEdgePtDist,
bool firstPass
) const;

View File

@ -2458,6 +2458,54 @@ void Foam::conformalVoronoiMesh::createFacesOwnerNeighbourAndPatches
|| (vB->internalOrBoundaryPoint() && !vB->referred())
)
{
if
(
(vA->internalPoint() && vB->externalBoundaryPoint())
|| (vB->internalPoint() && vA->externalBoundaryPoint())
)
{
Cell_circulator ccStart = incident_cells(*eit);
Cell_circulator cc1 = ccStart;
Cell_circulator cc2 = cc1;
cc2++;
bool skipEdge = false;
do
{
if
(
cc1->hasFarPoint() || cc2->hasFarPoint()
|| is_infinite(cc1) || is_infinite(cc2)
)
{
Pout<< "Ignoring edge between internal and external: "
<< vA->info()
<< vB->info();
skipEdge = true;
break;
}
cc1++;
cc2++;
} while (cc1 != ccStart);
// Do not create faces if the internal point is outside!
// This occurs because the internal point is not determined to
// be outside in the inside/outside test. This is most likely
// due to the triangle.nearestPointClassify test not returning
// edge/point as the nearest type.
if (skipEdge)
{
continue;
}
}
face newDualFace = buildDualFace(eit);
if (newDualFace.size() >= 3)

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@ -298,6 +298,8 @@ void Foam::conformalVoronoiMesh::buildSurfaceConformation()
DynamicList<label> edgeToTreeShape(AtoV/4);
DynamicList<label> surfaceToTreeShape(AtoV);
Map<scalar> surfacePtToEdgePtDist(AtoV/4);
for
(
Delaunay::Finite_vertices_iterator vit = finite_vertices_begin();
@ -332,6 +334,7 @@ void Foam::conformalVoronoiMesh::buildSurfaceConformation()
featureEdgeHits,
surfaceToTreeShape,
edgeToTreeShape,
surfacePtToEdgePtDist,
true
);
}
@ -463,6 +466,8 @@ void Foam::conformalVoronoiMesh::buildSurfaceConformation()
DynamicList<label> surfaceToTreeShape(AtoV/2);
DynamicList<label> edgeToTreeShape(AtoV/4);
Map<scalar> surfacePtToEdgePtDist;
for
(
Delaunay::Finite_vertices_iterator vit = finite_vertices_begin();
@ -507,6 +512,7 @@ void Foam::conformalVoronoiMesh::buildSurfaceConformation()
featureEdgeHits,
surfaceToTreeShape,
edgeToTreeShape,
surfacePtToEdgePtDist,
false
);
}
@ -552,6 +558,7 @@ void Foam::conformalVoronoiMesh::buildSurfaceConformation()
featureEdgeHits,
surfaceToTreeShape,
edgeToTreeShape,
surfacePtToEdgePtDist,
false
);
}
@ -569,7 +576,20 @@ void Foam::conformalVoronoiMesh::buildSurfaceConformation()
Vertex_handle vA = c->vertex(eit->second);
Vertex_handle vB = c->vertex(eit->third);
if (vA->referred() || vB->referred())
if
(
vA->referred()
|| vB->referred()
)
{
continue;
}
if
(
(vA->internalPoint() && vA->referred())
|| (vB->internalPoint() && vB->referred())
)
{
continue;
}
@ -617,6 +637,7 @@ void Foam::conformalVoronoiMesh::buildSurfaceConformation()
featureEdgeHits,
surfaceToTreeShape,
edgeToTreeShape,
surfacePtToEdgePtDist,
false
);
}
@ -2076,6 +2097,7 @@ void Foam::conformalVoronoiMesh::addSurfaceAndEdgeHits
pointIndexHitAndFeatureDynList& featureEdgeHits,
DynamicList<label>& surfaceToTreeShape,
DynamicList<label>& edgeToTreeShape,
Map<scalar>& surfacePtToEdgePtDist,
bool firstPass
) const
{
@ -2182,55 +2204,47 @@ void Foam::conformalVoronoiMesh::addSurfaceAndEdgeHits
(
pointIndexHitAndFeature(edHit, featureHit)
);
// Info<< "Add " << existingEdgeLocations_.size() - 1
// << " " << magSqr(edPt - surfPt) << endl;
surfacePtToEdgePtDist.insert
(
existingEdgeLocations_.size() - 1,
magSqr(edPt - surfPt)
);
}
else if (firstPass)
{
label hitIndex = nearestEdgeHit.index();
// Info<< "Close to " << nearestEdgeHit << endl;
if
(
magSqr(edPt - surfPt)
< surfacePtToEdgePtDist[hitIndex]
)
{
featureEdgeHits[hitIndex] =
pointIndexHitAndFeature(edHit, featureHit);
existingEdgeLocations_[hitIndex] =
edHit.hitPoint();
surfacePtToEdgePtDist[hitIndex] =
magSqr(edPt - surfPt);
// Change edge location in featureEdgeHits
// remove index from edge tree
// reinsert new point into tree
edgeLocationTreePtr_().remove(hitIndex);
edgeLocationTreePtr_().insert
(
hitIndex,
hitIndex + 1
);
}
}
// else if (firstPass)
// {
// label hitIndex = nearestEdgeHit.index();
//
// // Calc new edge location
//// Foam::point newPt =
//// 0.5
//// *(
//// nearestEdgeHit.hitPoint()
//// + edHit.hitPoint()
//// );
//
// pointIndexHit pHitOld =
// edgeLocationTreePtr_().findNearest
// (
// nearestEdgeHit.hitPoint(), GREAT
// );
//
// pointIndexHit pHitNew =
// edgeLocationTreePtr_().findNearest
// (
// edHit.hitPoint(), GREAT
// );
//
// if
// (
// pHitNew.hitPoint() - pHitOld.hitPoint()
// )
// {
// edHit.setPoint(pHit.hitPoint());
//
// featureEdgeHits[hitIndex] =
// pointIndexHitAndFeature(edHit, featureHit);
//
// existingEdgeLocations_[hitIndex] =
// edHit.hitPoint();
//
// // Change edge location in featureEdgeHits
// // remove index from edge tree
// // reinsert new point into tree
// edgeLocationTreePtr_().remove(hitIndex);
// edgeLocationTreePtr_().insert
// (
// hitIndex,
// hitIndex + 1
// );
// }
// }
}
}
}

View File

@ -873,17 +873,7 @@ void Foam::conformalVoronoiMesh::reinsertFeaturePoints(bool distribute)
{
Info<< nl << "Reinserting stored feature points" << endl;
label preReinsertionSize(number_of_vertices());
insertPoints(featureVertices_, distribute);
const label nReinserted = returnReduce
(
label(number_of_vertices()) - preReinsertionSize,
sumOp<label>()
);
Info<< " Reinserted " << nReinserted << " vertices" << endl;
}
@ -1458,8 +1448,6 @@ void Foam::conformalVoronoiMesh::createFeaturePoints(DynamicList<Vb>& pts)
forAll(feMeshes, i)
{
Info<< indent << "Edge mesh = " << feMeshes[i].name() << nl << endl;
const extendedFeatureEdgeMesh& feMesh(feMeshes[i]);
for

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@ -101,7 +101,9 @@ void Foam::conformalVoronoiMesh::drawDelaunayCell
// Supply offset as tet number
offset *= 4;
os << "# cell index: " << label(c->cellIndex()) << endl;
os << "# cell index: " << label(c->cellIndex())
<< " INT_MIN = " << INT_MIN
<< endl;
os << "# circumradius "
<< mag(c->dual() - topoint(c->vertex(0)->point()))
@ -112,7 +114,15 @@ void Foam::conformalVoronoiMesh::drawDelaunayCell
os << "# index / type / procIndex: "
<< label(c->vertex(i)->index()) << " "
<< label(c->vertex(i)->type()) << " "
<< label(c->vertex(i)->procIndex()) << endl;
<< label(c->vertex(i)->procIndex())
<< (is_infinite(c->vertex(i)) ? " # This vertex is infinite!" : "")
<<
(
c->vertex(i)->uninitialised()
? " # This vertex is uninitialised!"
: ""
)
<< endl;
meshTools::writeOBJ(os, topoint(c->vertex(i)->point()));
}

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@ -113,13 +113,12 @@ Foam::Ostream& Foam::operator<<
const CGAL::indexedVertex<Gt, Vb>& p
)
{
os << p.point()
<< p.index()
<< static_cast<int>(p.type())
<< p.procIndex()
<< p.alignment()
<< p.targetCellSize()
<< token::SPACE
os << p.point() << ' '
<< p.index() << ' '
<< static_cast<int>(p.type()) << ' '
<< p.procIndex() << ' '
<< p.alignment() << ' '
<< p.targetCellSize() << ' '
<< static_cast<int>(p.fixed());
return os;

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@ -706,8 +706,8 @@ Foam::Field<bool> Foam::conformationSurfaces::wellInside
// Info<< surface.name() << " = "
// << volumeType::names[surfaceVolumeTests[s][i]] << endl;
//if (surfaceVolumeTests[s][i] == volumeType::OUTSIDE)
if (surfaceVolumeTests[s][i] != volumeType::INSIDE)
if (surfaceVolumeTests[s][i] == volumeType::OUTSIDE)
// if (surfaceVolumeTests[s][i] != volumeType::INSIDE)
{
insidePoint[i] = false;

View File

@ -56,7 +56,7 @@ int main(int argc, char *argv[])
(
IOobject
(
"foamyHexMeshDict",
args.executable() + "Dict",
runTime.system(),
runTime,
IOobject::MUST_READ_IF_MODIFIED,

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@ -7,6 +7,6 @@ insertSurfaceNearPointPairs.C
insertBoundaryConformPointPairs.C
CV2DIO.C
shortEdgeFilter2D.C
foamyHex2DMesh.C
foamyQuadMesh.C
EXE = $(FOAM_APPBIN)/foamyHex2DMesh
EXE = $(FOAM_APPBIN)/foamyQuadMesh

View File

@ -22,7 +22,7 @@ License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
Application
foamyHex2DMesh
foamyQuadMesh
Description
Conformal-Voronoi 2D extruding automatic mesher with grid or read

View File

@ -11,31 +11,18 @@ FoamFile
format ascii;
class dictionary;
location "system";
object foamyHex2DMeshDict;
object foamyQuadMeshDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
geometry
{
laurence_clean_preciser.stl
surfaceFile.stl
{
name laurence_clean_preciser;
type closedTriSurfaceMesh;
//type triSurfaceMesh;
name surfaceFile;
type triSurfaceMesh;
}
// refinementBox
// {
// type searchableBox;
// min (-0.5 0.35 -1000);
// max (-0.5 0.35 1000);
// }
// refinementSphere
// {
// type searchableSphere;
// centre (0.85 0.4 0.0);
// radius 0.01;
// }
}
surfaceConformation
@ -66,10 +53,10 @@ surfaceConformation
geometryToConformTo
{
laurence_clean_preciser
surfaceFile
{
featureMethod extendedFeatureEdgeMesh;
extendedFeatureEdgeMesh "laurence_clean_preciser.extendedFeatureEdgeMesh";
extendedFeatureEdgeMesh "surfaceFile.extendedFeatureEdgeMesh";
}
}
@ -94,7 +81,7 @@ motionControl
cellSizeControlGeometry
{
laurence_clean_preciser
surfaceFile
{
priority 1;
mode bothSides;

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@ -653,6 +653,36 @@ int main(int argc, char *argv[])
Info<< "Checking self-intersection." << endl;
triSurfaceSearch querySurf(surf);
//{
// OBJstream intStream("selfInter2.obj");
// const indexedOctree<treeDataTriSurface>& tree = querySurf.tree();
// forAll(surf.edges(), edgeI)
// {
// const edge& e = surf.edges()[edgeI];
//
// pointIndexHit hitInfo
// (
// tree.findLine
// (
// surf.points()[surf.meshPoints()[e[0]]],
// surf.points()[surf.meshPoints()[e[1]]],
// treeDataTriSurface::findSelfIntersectOp
// (
// tree,
// edgeI
// )
// )
// );
//
// if (hitInfo.hit())
// {
// Pout<< "Found hit:" << hitInfo.hitPoint() << endl;
// intStream.write(hitInfo.hitPoint());
// }
// }
//}
surfaceIntersection inter(querySurf);
if (inter.cutEdges().empty() && inter.cutPoints().empty())

View File

@ -222,14 +222,6 @@ int main(int argc, char *argv[])
}
Info<< "Writing surface to " << outFileName << " ..." << endl;
// meshedSurface
// (
// xferMove(newPoints),
// xferCopy(surf1.localFaces()),
// xferCopy(surf1.surfZones())
// ).write(outFileName);
surf1.write(outFileName);
Info<< "End\n" << endl;

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -123,6 +123,19 @@ void ${typeName}FunctionObject::end()
}
void ${typeName}FunctionObject::timeSet()
{
if (${verbose:-false})
{
Info<<"timeSet ${typeName} sha1: ${SHA1sum}\n";
}
//{{{ begin codeTime
${codeTimeSet}
//}}} end code
}
void ${typeName}FunctionObject::write()
{
if (${verbose:-false})

View File

@ -127,6 +127,9 @@ public:
//- Write, execute the "writeCalls"
virtual void write();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Update for changes of mesh
virtual void updateMesh(const mapPolyMesh&)
{}

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@ -1220,6 +1220,7 @@ Foam::Time& Foam::Time::operator++()
writeOnce_ = false;
}
functionObjects_.timeSet();
}
return *this;

View File

@ -618,11 +618,11 @@ bool Foam::Time::writeObject
)
);
timeDict.add("value", value());
timeDict.add("value", timeToUserTime(value()));
timeDict.add("name", string(tmName));
timeDict.add("index", timeIndex_);
timeDict.add("deltaT", deltaT_);
timeDict.add("deltaT0", deltaT0_);
timeDict.add("deltaT", timeToUserTime(deltaT_));
timeDict.add("deltaT0", timeToUserTime(deltaT0_));
timeDict.regIOobject::writeObject(fmt, ver, cmp);
bool writeOK = objectRegistry::writeObject(fmt, ver, cmp);

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -202,6 +202,18 @@ bool Foam::OutputFilterFunctionObject<OutputFilter>::end()
}
template<class OutputFilter>
bool Foam::OutputFilterFunctionObject<OutputFilter>::timeSet()
{
if (active())
{
ptr_->timeSet();
}
return true;
}
template<class OutputFilter>
bool Foam::OutputFilterFunctionObject<OutputFilter>::read
(

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -201,6 +201,8 @@ public:
//- Called when Time::run() determines that the time-loop exits
virtual bool end();
//- Called when time was set at the end of the Time::operator++
virtual bool timeSet();
//- Read and set the function object if its data have changed
virtual bool read(const dictionary&);

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -120,6 +120,12 @@ bool Foam::functionObject::end()
}
bool Foam::functionObject::timeSet()
{
return false;
}
Foam::autoPtr<Foam::functionObject> Foam::functionObject::iNew::operator()
(
const word& name,

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -157,6 +157,9 @@ public:
// By default it simply calls execute().
virtual bool end();
//- Called when time was set at the end of the Time::operator++
virtual bool timeSet();
//- Read and set the function object if its data have changed
virtual bool read(const dictionary&) = 0;

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -190,6 +190,27 @@ bool Foam::functionObjectList::end()
}
bool Foam::functionObjectList::timeSet()
{
bool ok = true;
if (execution_)
{
if (!updated_)
{
read();
}
forAll(*this, objectI)
{
ok = operator[](objectI).timeSet() && ok;
}
}
return ok;
}
bool Foam::functionObjectList::read()
{
bool ok = true;

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -163,6 +163,9 @@ public:
//- Called when Time::run() determines that the time-loop exits
virtual bool end();
//- Called when time was set at the end of the Time::operator++
virtual bool timeSet();
//- Read and set the function objects if their data have changed
virtual bool read();

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -27,6 +27,7 @@ Description
\*---------------------------------------------------------------------------*/
#include "scalarField.H"
#include "unitConversion.H"
#define TEMPLATE
#include "FieldFunctionsM.C"
@ -155,6 +156,11 @@ UNARY_FUNCTION(scalar, scalar, j1)
UNARY_FUNCTION(scalar, scalar, y0)
UNARY_FUNCTION(scalar, scalar, y1)
UNARY_FUNCTION(scalar, scalar, degToRad)
UNARY_FUNCTION(scalar, scalar, radToDeg)
UNARY_FUNCTION(scalar, scalar, atmToPa)
UNARY_FUNCTION(scalar, scalar, paToAtm)
#define BesselFunc(func) \
void func(scalarField& res, const int n, const UList<scalar>& sf) \

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -130,6 +130,10 @@ UNARY_FUNCTION(scalar, scalar, j1)
UNARY_FUNCTION(scalar, scalar, y0)
UNARY_FUNCTION(scalar, scalar, y1)
UNARY_FUNCTION(scalar, scalar, degToRad)
UNARY_FUNCTION(scalar, scalar, radToDeg)
UNARY_FUNCTION(scalar, scalar, atmToPa)
UNARY_FUNCTION(scalar, scalar, paToAtm)
#define BesselFunc(func) \
void func(scalarField& Res, const int n, const UList<scalar>& sf); \

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@ -0,0 +1,73 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "SquareMatrix.H"
#include "labelList.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
template<class Type>
Foam::scalar Foam::detDecomposed
(
const SquareMatrix<Type>& matrix,
const label sign
)
{
scalar diagProduct = 1.0;
for (label i = 0; i < matrix.n(); ++i)
{
diagProduct *= matrix[i][i];
}
return sign*diagProduct;
}
template<class Type>
Foam::scalar Foam::det(const SquareMatrix<Type>& matrix)
{
SquareMatrix<Type> matrixTmp = matrix;
labelList pivotIndices(matrix.n());
label sign;
LUDecompose(matrixTmp, pivotIndices, sign);
return detDecomposed(matrixTmp, sign);
}
template<class Type>
Foam::scalar Foam::det(SquareMatrix<Type>& matrix)
{
labelList pivotIndices(matrix.n());
label sign;
LUDecompose(matrix, pivotIndices, sign);
return detDecomposed(matrix, sign);
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

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@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -81,6 +81,21 @@ public:
};
// Global functions
//- Return the LU decomposed SquareMatrix det
template<class Type>
scalar detDecomposed(const SquareMatrix<Type>&, const label sign);
//- Return the SquareMatrix det
template<class Type>
scalar det(const SquareMatrix<Type>&);
//- Return the SquareMatrix det and the LU decomposition in the original matrix
template<class Type>
scalar det(SquareMatrix<Type>&);
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
@ -91,6 +106,12 @@ public:
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#ifdef NoRepository
# include "SquareMatrix.C"
#endif
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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@ -535,4 +535,123 @@ const Foam::labelListListList& Foam::GAMGAgglomeration::boundaryFaceMap
}
bool Foam::GAMGAgglomeration::checkRestriction
(
labelList& newRestrict,
label& nNewCoarse,
const lduAddressing& fineAddressing,
const labelUList& restrict,
const label nCoarse
)
{
if (fineAddressing.size() != restrict.size())
{
FatalErrorIn
(
"checkRestriction(..)"
) << "nCells:" << fineAddressing.size()
<< " agglom:" << restrict.size()
<< abort(FatalError);
}
// Seed (master) for every region
labelList master(identity(fineAddressing.size()));
// Now loop and transport master through region
const labelUList& lower = fineAddressing.lowerAddr();
const labelUList& upper = fineAddressing.upperAddr();
while (true)
{
label nChanged = 0;
forAll(lower, faceI)
{
label own = lower[faceI];
label nei = upper[faceI];
if (restrict[own] == restrict[nei])
{
// coarse-mesh-internal face
if (master[own] < master[nei])
{
master[nei] = master[own];
nChanged++;
}
else if (master[own] > master[nei])
{
master[own] = master[nei];
nChanged++;
}
}
}
reduce(nChanged, sumOp<label>());
if (nChanged == 0)
{
break;
}
}
// Count number of regions/masters per coarse cell
labelListList coarseToMasters(nCoarse);
nNewCoarse = 0;
forAll(restrict, cellI)
{
labelList& masters = coarseToMasters[restrict[cellI]];
if (findIndex(masters, master[cellI]) == -1)
{
masters.append(master[cellI]);
nNewCoarse++;
}
}
if (nNewCoarse > nCoarse)
{
//WarningIn("GAMGAgglomeration::checkRestriction(..)")
// << "Have " << nCoarse
// << " agglomerated cells but " << nNewCoarse
// << " disconnected regions" << endl;
// Keep coarseToMasters[0] the original coarse, allocate new ones
// for the others
labelListList coarseToNewCoarse(coarseToMasters.size());
nNewCoarse = nCoarse;
forAll(coarseToMasters, coarseI)
{
const labelList& masters = coarseToMasters[coarseI];
labelList& newCoarse = coarseToNewCoarse[coarseI];
newCoarse.setSize(masters.size());
newCoarse[0] = coarseI;
for (label i = 1; i < newCoarse.size(); i++)
{
newCoarse[i] = nNewCoarse++;
}
}
newRestrict.setSize(fineAddressing.size());
forAll(restrict, cellI)
{
label coarseI = restrict[cellI];
label index = findIndex(coarseToMasters[coarseI], master[cellI]);
newRestrict[cellI] = coarseToNewCoarse[coarseI][index];
}
return false;
}
else
{
return true;
}
}
// ************************************************************************* //

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@ -474,6 +474,16 @@ public:
const labelListListList& boundaryFaceMap(const label fineLeveli)
const;
//- Given restriction determines if coarse cells are connected.
// Return ok is so, otherwise creates new restriction that is
static bool checkRestriction
(
labelList& newRestrict,
label& nNewCoarse,
const lduAddressing& fineAddressing,
const labelUList& restrict,
const label nCoarse
);
};

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@ -33,9 +33,22 @@ void Foam::LUDecompose
scalarSquareMatrix& matrix,
labelList& pivotIndices
)
{
label sign;
LUDecompose(matrix, pivotIndices, sign);
}
void Foam::LUDecompose
(
scalarSquareMatrix& matrix,
labelList& pivotIndices,
label& sign
)
{
label n = matrix.n();
scalar vv[n];
sign = 1;
for (register label i=0; i<n; i++)
{
@ -113,6 +126,7 @@ void Foam::LUDecompose
Swap(matrixj[k], matrixiMax[k]);
}
sign *= -1;
vv[iMax] = vv[j];
}

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@ -79,6 +79,15 @@ void LUDecompose
labelList& pivotIndices
);
//- LU decompose the matrix with pivoting.
// sign is -1 for odd number of row interchanges and 1 for even number.
void LUDecompose
(
scalarSquareMatrix& matrix,
labelList& pivotIndices,
label& sign
);
//- LU decompose the matrix into a lower (L) and upper (U) part. U = L.T()
void LUDecompose(scalarSymmetricSquareMatrix& matrix);

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@ -63,16 +63,6 @@ public:
const vectorField& cellCtrs
);
// static tmp<scalarField> faceOrthogonality(const polyMesh& mesh)
// {
// return faceOrthogonality
// (
// mesh,
// mesh.faceAreas(),
// mesh.cellCentres()
// );
// }
//- Generate skewness field
static tmp<scalarField> faceSkewness
(
@ -83,18 +73,6 @@ public:
const vectorField& cellCtrs
);
// static tmp<scalarField> faceSkewness(const polyMesh& mesh)
// {
// return faceSkewness
// (
// mesh,
// mesh.points(),
// mesh.faceCentres(),
// mesh.faceAreas(),
// mesh.cellCentres()
// );
// }
//- Generate interpolation factors field
static tmp<scalarField> faceWeights
(

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@ -550,6 +550,16 @@ Foam::label Foam::polyMeshFilter::filter(const label nOriginalBadFaces)
// Maintain the number of times a point has been part of a bad face
labelList pointErrorCount(mesh_.nPoints(), 0);
PackedBoolList newErrorPoint(mesh_.nPoints());
edgeCollapser::checkMeshQuality
(
mesh_,
meshQualityCoeffDict_,
newErrorPoint
);
bool newBadFaces = true;
// Main loop
// ~~~~~~~~~
// It tries and do some collapses, checks the resulting mesh and
@ -559,7 +569,8 @@ Foam::label Foam::polyMeshFilter::filter(const label nOriginalBadFaces)
while
(
nOuterIterations < maxIterations_
&& nBadFaces > nOriginalBadFaces
//&& nBadFaces > nOriginalBadFaces
&& newBadFaces
)
{
Info<< nl << "Outer Iteration = " << nOuterIterations++ << nl
@ -902,6 +913,21 @@ Foam::label Foam::polyMeshFilter::filter(const label nOriginalBadFaces)
isErrorPoint,
pointErrorCount
);
newBadFaces = false;
forAll(mesh_.points(), pI)
{
if (isErrorPoint[origToCurrentPointMap[pI]])
{
if (!newErrorPoint[pI])
{
newBadFaces = true;
break;
}
}
}
reduce(newBadFaces, orOp<bool>());
}
else
{

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@ -45,7 +45,7 @@ void Foam::extendedFeatureEdgeMesh::sortPointsAndEdges
const edgeList& sFeatEds(surf.edges());
const labelListList edgeFaces = PatchTools::sortedEdgeFaces(surf);
const vectorField& faceNormals = surf.faceNormals();
const labelListList& pointEdges = PatchTools::sortedPointEdges(surf);
const labelListList pointEdges = PatchTools::sortedPointEdges(surf);
// Extract and reorder the data from surfaceFeatures

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@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -156,6 +156,26 @@ Foam::tmp<Foam::labelField> Foam::MGridGenGAMGAgglomeration::agglomerate
finalAgglom.begin()
);
{
label nNewCoarseCells = 0;
labelList newRestrictAddr;
bool ok = checkRestriction
(
newRestrictAddr,
nNewCoarseCells
,
fineAddressing,
finalAgglom,
nCoarseCells
);
if (!ok)
{
nCoarseCells = nNewCoarseCells;
finalAgglom.transfer(newRestrictAddr);
}
}
return tmp<labelField>(new labelField(finalAgglom));
}

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@ -415,46 +415,10 @@ void Foam::PointEdgeWave<Type, TrackingData>::handleProcPatches()
}
}
//
// 3. Handle all shared points
// (Note:irrespective if changed or not for now)
//
const globalMeshData& pd = mesh_.globalData();
List<Type> sharedData(pd.nGlobalPoints());
forAll(pd.sharedPointLabels(), i)
{
label meshPointI = pd.sharedPointLabels()[i];
// Fill my entries in the shared points
sharedData[pd.sharedPointAddr()[i]] = allPointInfo_[meshPointI];
}
// Combine on master. Reduce operator has to handle a list and call
// Type.updatePoint for all elements
combineReduce(sharedData, listUpdateOp<Type>(propagationTol_, td_));
forAll(pd.sharedPointLabels(), i)
{
label meshPointI = pd.sharedPointLabels()[i];
// Retrieve my entries from the shared points.
const Type& nbrInfo = sharedData[pd.sharedPointAddr()[i]];
if (!allPointInfo_[meshPointI].equal(nbrInfo, td_))
{
updatePoint
(
meshPointI,
nbrInfo,
allPointInfo_[meshPointI]
);
}
}
// Collocated points should be handled by face based transfer
// (since that is how connectivity is worked out)
// They are also explicitly equalised in handleCollocatedPoints to
// guarantee identical values.
}

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@ -109,8 +109,6 @@ Foam::treeDataEdge::findIntersectOp::findIntersectOp
(
const indexedOctree<treeDataEdge>& tree
)
:
tree_(tree)
{}

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@ -121,8 +121,6 @@ public:
class findIntersectOp
{
const indexedOctree<treeDataEdge>& tree_;
public:
findIntersectOp(const indexedOctree<treeDataEdge>& tree);

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@ -70,8 +70,6 @@ Foam::treeDataPoint::findIntersectOp::findIntersectOp
(
const indexedOctree<treeDataPoint>& tree
)
:
tree_(tree)
{}

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@ -104,8 +104,6 @@ public:
class findIntersectOp
{
const indexedOctree<treeDataPoint>& tree_;
public:
findIntersectOp(const indexedOctree<treeDataPoint>& tree);

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@ -66,76 +66,6 @@ void Foam::treeDataPrimitivePatch<PatchType>::update()
}
template<class PatchType>
bool Foam::treeDataPrimitivePatch<PatchType>::findIntersection
(
const indexedOctree<treeDataPrimitivePatch<PatchType> >& tree,
const label index,
const point& start,
const point& end,
point& intersectionPoint
)
{
const treeDataPrimitivePatch<PatchType>& shape = tree.shapes();
const PatchType& patch = shape.patch();
const pointField& points = patch.points();
const typename PatchType::FaceType& f = patch[index];
// Do quick rejection test
if (shape.cacheBb_)
{
const treeBoundBox& faceBb = shape.bbs_[index];
if ((faceBb.posBits(start) & faceBb.posBits(end)) != 0)
{
// start and end in same block outside of faceBb.
return false;
}
}
const vector dir(end - start);
pointHit inter;
if (f.size() == 3)
{
inter = triPointRef
(
points[f[0]],
points[f[1]],
points[f[2]]
).intersection(start, dir, intersection::HALF_RAY, shape.planarTol_);
}
else
{
const pointField& faceCentres = patch.faceCentres();
inter = f.intersection
(
start,
dir,
faceCentres[index],
points,
intersection::HALF_RAY,
shape.planarTol_
);
}
if (inter.hit() && inter.distance() <= 1)
{
// Note: no extra test on whether intersection is in front of us
// since using half_ray
intersectionPoint = inter.hitPoint();
return true;
}
else
{
return false;
}
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
// Construct from components
@ -187,6 +117,19 @@ Foam::treeDataPrimitivePatch<PatchType>::findAllIntersectOp::findAllIntersectOp
{}
template<class PatchType>
Foam::treeDataPrimitivePatch<PatchType>::
findSelfIntersectOp::findSelfIntersectOp
(
const indexedOctree<treeDataPrimitivePatch<PatchType> >& tree,
const label edgeID
)
:
tree_(tree),
edgeID_(edgeID)
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
template<class PatchType>
@ -645,4 +588,116 @@ bool Foam::treeDataPrimitivePatch<PatchType>::findAllIntersectOp::operator()
}
template<class PatchType>
bool Foam::treeDataPrimitivePatch<PatchType>::findSelfIntersectOp::operator()
(
const label index,
const point& start,
const point& end,
point& intersectionPoint
) const
{
if (edgeID_ == -1)
{
FatalErrorIn
(
"findSelfIntersectOp::operator()\n"
"(\n"
" const label index,\n"
" const point& start,\n"
" const point& end,\n"
" point& intersectionPoint\n"
") const"
) << "EdgeID not set. Please set edgeID to the index of"
<< " the edge you are testing"
<< exit(FatalError);
}
const treeDataPrimitivePatch<PatchType>& shape = tree_.shapes();
const PatchType& patch = shape.patch();
const typename PatchType::FaceType& f = patch.localFaces()[index];
const edge& e = patch.edges()[edgeID_];
if (findIndex(f, e[0]) == -1 && findIndex(f, e[1]) == -1)
{
return findIntersection(tree_, index, start, end, intersectionPoint);
}
else
{
return false;
}
}
template<class PatchType>
bool Foam::treeDataPrimitivePatch<PatchType>::findIntersection
(
const indexedOctree<treeDataPrimitivePatch<PatchType> >& tree,
const label index,
const point& start,
const point& end,
point& intersectionPoint
)
{
const treeDataPrimitivePatch<PatchType>& shape = tree.shapes();
const PatchType& patch = shape.patch();
const pointField& points = patch.points();
const typename PatchType::FaceType& f = patch[index];
// Do quick rejection test
if (shape.cacheBb_)
{
const treeBoundBox& faceBb = shape.bbs_[index];
if ((faceBb.posBits(start) & faceBb.posBits(end)) != 0)
{
// start and end in same block outside of faceBb.
return false;
}
}
const vector dir(end - start);
pointHit inter;
if (f.size() == 3)
{
inter = triPointRef
(
points[f[0]],
points[f[1]],
points[f[2]]
).intersection(start, dir, intersection::HALF_RAY, shape.planarTol_);
}
else
{
const pointField& faceCentres = patch.faceCentres();
inter = f.intersection
(
start,
dir,
faceCentres[index],
points,
intersection::HALF_RAY,
shape.planarTol_
);
}
if (inter.hit() && inter.distance() <= 1)
{
// Note: no extra test on whether intersection is in front of us
// since using half_ray
intersectionPoint = inter.hitPoint();
return true;
}
else
{
return false;
}
}
// ************************************************************************* //

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@ -86,16 +86,6 @@ class treeDataPrimitivePatch
//- Initialise all member data
void update();
//- Find intersection of line with shapes
static bool findIntersection
(
const indexedOctree<treeDataPrimitivePatch<PatchType> >& tree,
const label index,
const point& start,
const point& end,
point& intersectionPoint
);
public:
@ -141,8 +131,8 @@ public:
findIntersectOp(const indexedOctree<treeDataPrimitivePatch>& tree);
//- Calculate intersection of triangle with ray. Sets result
// accordingly
//- Calculate intersection of any face with ray. Sets result
// accordingly. Used to find first intersection.
bool operator()
(
const label index,
@ -167,8 +157,34 @@ public:
DynamicList<label>& shapeMask
);
//- Calculate intersection of triangle with ray. Sets result
// accordingly
//- Calculate intersection of unique face with ray. Sets result
// accordingly. Used to find all faces.
bool operator()
(
const label index,
const point& start,
const point& end,
point& intersectionPoint
) const;
};
class findSelfIntersectOp
{
const indexedOctree<treeDataPrimitivePatch>& tree_;
const label edgeID_;
public:
findSelfIntersectOp
(
const indexedOctree<treeDataPrimitivePatch>& tree,
const label edgeID
);
//- Calculate intersection of face with edge of patch. Excludes
// faces that use edgeID. Used to find self intersection.
bool operator()
(
const label index,
@ -234,6 +250,16 @@ public:
const point& centre,
const scalar radiusSqr
) const;
//- Helper: find intersection of line with shapes
static bool findIntersection
(
const indexedOctree<treeDataPrimitivePatch<PatchType> >& tree,
const label index,
const point& start,
const point& end,
point& intersectionPoint
);
};

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@ -74,6 +74,26 @@ const Foam::NamedEnum<Foam::distributedTriSurfaceMesh::distributionType, 3>
// Read my additional data from the dictionary
bool Foam::distributedTriSurfaceMesh::read()
{
if
(
Pstream::parRun()
&&
(
regIOobject::fileModificationChecking == timeStampMaster
|| regIOobject::fileModificationChecking == inotifyMaster
)
)
{
FatalErrorIn("Foam::distributedTriSurfaceMesh::read()")
<< " distributedTriSurfaceMesh is being constructed\n"
<< " using 'timeStampMaster' or 'inotifyMaster.'\n"
<< " Modify the entry fileModificationChecking\n"
<< " in the etc/controlDict.\n"
<< " Use 'timeStamp' instead."
<< exit(FatalError);
}
// Get bb of all domains.
procBb_.setSize(Pstream::nProcs());
@ -183,10 +203,6 @@ void Foam::distributedTriSurfaceMesh::distributeSegment
List<DynamicList<label> >& sendMap
) const
{
// Work points
point clipPt;
// 1. Fully local already handled outside. Note: retest is cheap.
if (isLocal(procBb_[Pstream::myProcNo()], start, end))
{
@ -227,6 +243,9 @@ void Foam::distributedTriSurfaceMesh::distributeSegment
// Scheme a: any processor that intersects the segment gets
// the segment.
// Intersection point
point clipPt;
if (bb.intersects(start, end, clipPt))
{
sendMap[procI].append(allSegments.size());

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -87,13 +87,33 @@ void Foam::partialWrite::read(const dictionary& dict)
<< ". It should be >= 1."
<< exit(FatalIOError);
}
// Clear out any previously loaded fields
vsf_.clear();
vvf_.clear();
vSpheretf_.clear();
vSymmtf_.clear();
vtf_.clear();
ssf_.clear();
svf_.clear();
sSpheretf_.clear();
sSymmtf_.clear();
stf_.clear();
forAllConstIter(HashSet<word>, objectNames_, iter)
{
loadField<scalar>(iter.key(), vsf_, ssf_);
loadField<vector>(iter.key(), vvf_, svf_);
loadField<sphericalTensor>(iter.key(), vSpheretf_, sSpheretf_);
loadField<symmTensor>(iter.key(), vSymmtf_, sSymmtf_);
loadField<tensor>(iter.key(), vtf_, stf_);
}
}
void Foam::partialWrite::execute()
{
//Pout<< "execute at time " << obr_.time().timeName()
// << " index:" << obr_.time().timeIndex() << endl;
}
@ -104,99 +124,61 @@ void Foam::partialWrite::end()
}
void Foam::partialWrite::write()
void Foam::partialWrite::timeSet()
{
//Pout<< "write at time " << obr_.time().timeName() << endl;
if (obr_.time().outputTime())
{
// Above check so it can be used both with
// outputControl timeStep;
// outputInterval 1;
// or with
// outputControl outputTime;
writeInstance_++;
if (writeInstance_ == writeInterval_)
{
// Normal dump
// Next overall dump corresponf to partial write. Change
// write options to AUTO_WRITE
writeInstance_ = 0;
changeWriteOptions<scalar>(vsf_, ssf_, IOobject::AUTO_WRITE);
changeWriteOptions<vector>(vvf_, svf_, IOobject::AUTO_WRITE);
changeWriteOptions<sphericalTensor>
(
vSpheretf_,
sSpheretf_,
IOobject::AUTO_WRITE
);
changeWriteOptions<symmTensor>
(
vSymmtf_,
sSymmtf_,
IOobject::AUTO_WRITE
);
changeWriteOptions<tensor>(vtf_, stf_, IOobject::AUTO_WRITE);
}
else
{
// Delete all but marked objects
fileName dbDir;
if (isA<polyMesh>(obr_))
{
dbDir = dynamic_cast<const polyMesh&>(obr_).dbDir();
}
IOobjectList objects(obr_, obr_.time().timeName());
if (debug)
{
Pout<< "For region:" << obr_.name() << endl;
}
forAllConstIter(IOobjectList, objects, iter)
{
if (!objectNames_.found(iter()->name()))
{
const fileName f =
obr_.time().timePath()
/dbDir
/iter()->name();
if (debug)
{
Pout<< " rm " << f << endl;
}
rm(f);
}
}
// Do the lagrangian files as well.
fileNameList cloudDirs
changeWriteOptions<scalar>(vsf_, ssf_, IOobject::NO_WRITE);
changeWriteOptions<vector>(vvf_, svf_, IOobject::NO_WRITE);
changeWriteOptions<sphericalTensor>
(
readDir
(
obr_.time().timePath()/dbDir/cloud::prefix,
fileName::DIRECTORY
)
vSpheretf_,
sSpheretf_,
IOobject::NO_WRITE
);
forAll(cloudDirs, i)
{
if (debug)
{
Pout<< "For cloud:" << cloudDirs[i] << endl;
}
IOobjectList sprayObjs
(
obr_,
obr_.time().timeName(),
cloud::prefix/cloudDirs[i]
);
forAllConstIter(IOobjectList, sprayObjs, iter)
{
if (!objectNames_.found(iter()->name()))
{
const fileName f =
obr_.time().timePath()
/dbDir
/cloud::prefix
/cloudDirs[i]
/iter()->name();
if (debug)
{
Pout<< " rm " << f << endl;
}
rm(f);
}
}
}
changeWriteOptions<symmTensor>
(
vSymmtf_,
sSymmtf_,
IOobject::NO_WRITE
);
changeWriteOptions<tensor>(vtf_, stf_, IOobject::NO_WRITE);
}
}
}
void Foam::partialWrite::write()
{
// Do nothing. The fields get written through the
// standard dump
}
// ************************************************************************* //

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -29,8 +29,8 @@ Group
Description
This function object allows user-selected fields/registered objects to be
written at a custom write interval. It operates by deleting all entries
except those selected after writing.
written at a custom write interval. The interval is given in terms of
number of overall dumps
Example of function object specification:
\verbatim
@ -66,8 +66,9 @@ SourceFiles
#define partialWrite_H
#include "HashSet.H"
#include "DynamicList.H"
#include "runTimeSelectionTables.H"
#include "volFields.H"
#include "surfaceFields.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -95,6 +96,18 @@ protected:
const objectRegistry& obr_;
//- Loaded fields
UPtrList<volScalarField> vsf_;
UPtrList<volVectorField> vvf_;
UPtrList<volSphericalTensorField> vSpheretf_;
UPtrList<volSymmTensorField> vSymmtf_;
UPtrList<volTensorField> vtf_;
UPtrList<surfaceScalarField> ssf_;
UPtrList<surfaceVectorField> svf_;
UPtrList<surfaceSphericalTensorField> sSpheretf_;
UPtrList<surfaceSymmTensorField> sSymmtf_;
UPtrList<surfaceTensorField> stf_;
// Read from dictionary
@ -105,6 +118,7 @@ protected:
label writeInterval_;
//- Current dump instance. If reaches writeInterval do a full write.
label writeInstance_;
@ -118,6 +132,24 @@ protected:
void operator=(const partialWrite&);
//- Load objects in the objectNames
template<class Type>
void loadField
(
const word&,
UPtrList<GeometricField<Type, fvPatchField, volMesh> >&,
UPtrList<GeometricField<Type, fvsPatchField, surfaceMesh> >&
) const;
template<class Type>
void changeWriteOptions
(
UPtrList<GeometricField<Type, fvPatchField, volMesh> >&,
UPtrList<GeometricField<Type, fvsPatchField, surfaceMesh> >&,
const IOobject::writeOption
) const;
public:
//- Runtime type information
@ -152,12 +184,15 @@ public:
//- Read the partialWrite data
virtual void read(const dictionary&);
//- Execute, currently does nothing
//- Execute
virtual void execute();
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Write the partialWrite
virtual void write();
@ -177,6 +212,12 @@ public:
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#ifdef NoRepository
# include "partialWriteTemplates.C"
#endif
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

View File

@ -0,0 +1,105 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "partialWrite.H"
#include "volFields.H"
#include "surfaceFields.H"
#include "Time.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
template<class Type>
void Foam::partialWrite::loadField
(
const word& fieldName,
UPtrList<GeometricField<Type, fvPatchField, volMesh> >& vflds,
UPtrList<GeometricField<Type, fvsPatchField, surfaceMesh> >& sflds
) const
{
typedef GeometricField<Type, fvPatchField, volMesh> vfType;
typedef GeometricField<Type, fvsPatchField, surfaceMesh> sfType;
if (obr_.foundObject<vfType>(fieldName))
{
if (debug)
{
Info<< "partialWrite : Field "
<< fieldName << " found in database" << endl;
}
vfType& vField =
const_cast<vfType&>
(
obr_.lookupObject<vfType>(fieldName)
);
const unsigned int sz = vflds.size();
vflds.setSize(sz + 1);
vflds.set(sz, &vField);
}
else if (obr_.foundObject<sfType>(fieldName))
{
if (debug)
{
Info<< "partialWrite : Field " << fieldName
<< " found in database" << endl;
}
sfType& sField =
const_cast<sfType&>
(
obr_.lookupObject<sfType>(fieldName)
);
const unsigned int sz = sflds.size();
sflds.setSize(sz + 1);
sflds.set(sz, &sField);
}
}
template<class Type>
void Foam::partialWrite::changeWriteOptions
(
UPtrList<GeometricField<Type, fvPatchField, volMesh> >& vflds,
UPtrList<GeometricField<Type, fvsPatchField, surfaceMesh> >& sflds,
const IOobject::writeOption wOption
) const
{
forAll(vflds , i)
{
vflds[i].writeOpt() = wOption;
}
forAll(sflds , i)
{
sflds[i].writeOpt() = wOption;
}
}
// ************************************************************************* //

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -92,6 +92,12 @@ void Foam::removeRegisteredObject::end()
}
void Foam::removeRegisteredObject::timeSet()
{
// Do nothing - only valid on execute
}
void Foam::removeRegisteredObject::write()
{
// Do nothing - only valid on execute

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -146,6 +146,9 @@ public:
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Write the removeRegisteredObject
virtual void write();

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -199,6 +199,12 @@ void Foam::writeDictionary::end()
}
void Foam::writeDictionary::timeSet()
{
// do nothing
}
void Foam::writeDictionary::write()
{
// do nothing

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -134,6 +134,9 @@ public:
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Write the writeDictionary
virtual void write();

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -79,6 +79,12 @@ void Foam::writeRegisteredObject::end()
}
void Foam::writeRegisteredObject::timeSet()
{
// Do nothing - only valid on write
}
void Foam::writeRegisteredObject::write()
{
forAll(objectNames_, i)

View File

@ -147,6 +147,9 @@ public:
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Write the writeRegisteredObject
virtual void write();

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -106,6 +106,12 @@ void Foam::cloudInfo::end()
}
void Foam::cloudInfo::timeSet()
{
// Do nothing
}
void Foam::cloudInfo::write()
{
if (active_)

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -162,6 +162,9 @@ public:
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Write
virtual void write();

View File

@ -393,6 +393,10 @@ void Foam::fieldAverage::end()
{}
void Foam::fieldAverage::timeSet()
{}
void Foam::fieldAverage::write()
{
if (active_)

View File

@ -318,6 +318,9 @@ public:
//- Execute the averaging at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Calculate the field average data and write
virtual void write();

View File

@ -104,6 +104,12 @@ void Foam::fieldCoordinateSystemTransform::end()
}
void Foam::fieldCoordinateSystemTransform::timeSet()
{
// Do nothing
}
void Foam::fieldCoordinateSystemTransform::write()
{
forAll(fieldSet_, fieldI)

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -173,6 +173,9 @@ public:
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Write
virtual void write();

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -139,6 +139,12 @@ void Foam::fieldMinMax::end()
}
void Foam::fieldMinMax::timeSet()
{
// Do nothing - only valid on write
}
void Foam::fieldMinMax::write()
{
if (active_)

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -189,6 +189,9 @@ public:
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Calculate the field min/max
template<class Type>
void calcMinMaxFields

View File

@ -131,6 +131,12 @@ void Foam::fieldValue::end()
}
void Foam::fieldValue::timeSet()
{
// Do nothing
}
void Foam::fieldValue::updateMesh(const mapPolyMesh&)
{
// Do nothing

View File

@ -191,6 +191,9 @@ public:
//- Execute the at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Update mesh
virtual void updateMesh(const mapPolyMesh&);

View File

@ -202,6 +202,12 @@ void Foam::fieldValues::fieldValueDelta::end()
}
void Foam::fieldValues::fieldValueDelta::timeSet()
{
// Do nothing
}
void Foam::fieldValues::fieldValueDelta::updateMesh(const mapPolyMesh&)
{
// Do nothing

View File

@ -192,6 +192,9 @@ public:
//- Execute the at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Update mesh
virtual void updateMesh(const mapPolyMesh&);

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -163,6 +163,11 @@ void Foam::nearWallFields::end()
}
void Foam::nearWallFields::timeSet()
{
}
void Foam::nearWallFields::write()
{
if (debug)

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -191,6 +191,9 @@ public:
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Write
virtual void write();

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -96,6 +96,12 @@ void Foam::processorField::end()
}
void Foam::processorField::timeSet()
{
// Do nothing
}
void Foam::processorField::write()
{
if (active_)

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -145,6 +145,9 @@ public:
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Write
virtual void write();

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -122,6 +122,12 @@ void Foam::readFields::end()
}
void Foam::readFields::timeSet()
{
// Do nothing
}
void Foam::readFields::write()
{
// Do nothing

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2012 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2013 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -173,6 +173,9 @@ public:
//- Execute at the final time-loop, currently does nothing
virtual void end();
//- Called when time was set at the end of the Time::operator++
virtual void timeSet();
//- Write
virtual void write();

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