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ENH: snappyHexMesh: layer coverage volfields
This commit is contained in:
@ -1253,6 +1253,9 @@ int main(int argc, char *argv[])
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// Snap parameters
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const snapParameters snapParams(snapDict);
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// Layer addition parameters
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const layerParameters layerParams(layerDict, mesh.boundaryMesh());
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if (wantRefine)
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{
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@ -1346,9 +1349,6 @@ int main(int argc, char *argv[])
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globalToSlavePatch
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);
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// Layer addition parameters
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layerParameters layerParams(layerDict, mesh.boundaryMesh());
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// Use the maxLocalCells from the refinement parameters
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bool preBalance = returnReduce
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(
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@ -304,11 +304,13 @@ addLayersControls
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// size of the refined cell outside layer (true) or absolute sizes (false).
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relativeSizes true;
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// Layer thickness specification. This can be specified in one of four ways
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// Layer thickness specification. This can be specified in one of following
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// ways:
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// - expansionRatio and finalLayerThickness (cell nearest internal mesh)
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// - expansionRatio and firstLayerThickness (cell on surface)
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// - overall thickness and firstLayerThickness
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// - overall thickness and finalLayerThickness
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// - overall thickness and expansionRatio
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// Expansion factor for layer mesh
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expansionRatio 1.0;
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@ -52,6 +52,7 @@ Description
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#include "fixedValuePointPatchFields.H"
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#include "calculatedPointPatchFields.H"
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#include "cyclicSlipPointPatchFields.H"
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#include "fixedValueFvPatchFields.H"
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// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
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@ -110,6 +111,31 @@ void Foam::autoLayerDriver::dumpDisplacement
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}
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Foam::tmp<Foam::scalarField> Foam::autoLayerDriver::avgPointData
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(
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const indirectPrimitivePatch& pp,
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const scalarField& pointFld
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)
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{
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tmp<scalarField> tfaceFld(new scalarField(pp.size(), 0.0));
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scalarField& faceFld = tfaceFld();
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forAll(pp.localFaces(), faceI)
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{
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const face& f = pp.localFaces()[faceI];
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if (f.size())
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{
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forAll(f, fp)
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{
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faceFld[faceI] += pointFld[f[fp]];
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}
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faceFld[faceI] /= f.size();
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}
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}
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return tfaceFld;
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}
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// Check that primitivePatch is not multiply connected. Collect non-manifold
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// points in pointSet.
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void Foam::autoLayerDriver::checkManifold
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@ -2391,19 +2417,21 @@ Foam::label Foam::autoLayerDriver::countExtrusion
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}
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// Collect layer faces and layer cells into bools for ease of handling
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// Collect layer faces and layer cells into mesh fields for ease of handling
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void Foam::autoLayerDriver::getLayerCellsFaces
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(
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const polyMesh& mesh,
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const addPatchCellLayer& addLayer,
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boolList& flaggedCells,
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boolList& flaggedFaces
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const scalarField& oldRealThickness,
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labelList& cellNLayers,
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scalarField& faceRealThickness
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)
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{
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flaggedCells.setSize(mesh.nCells());
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flaggedCells = false;
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flaggedFaces.setSize(mesh.nFaces());
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flaggedFaces = false;
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cellNLayers.setSize(mesh.nCells());
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cellNLayers = 0;
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faceRealThickness.setSize(mesh.nFaces());
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faceRealThickness = 0;
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// Mark all faces in the layer
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const labelListList& layerFaces = addLayer.layerFaces();
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@ -2415,27 +2443,195 @@ void Foam::autoLayerDriver::getLayerCellsFaces
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{
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const labelList& added = addedCells[oldPatchFaceI];
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forAll(added, i)
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const labelList& layer = layerFaces[oldPatchFaceI];
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if (layer.size())
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{
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flaggedCells[added[i]] = true;
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forAll(added, i)
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{
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cellNLayers[added[i]] = layer.size()-1;
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}
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}
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}
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forAll(layerFaces, oldPatchFaceI)
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{
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const labelList& layer = layerFaces[oldPatchFaceI];
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const scalar realThickness = oldRealThickness[oldPatchFaceI];
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if (layer.size())
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{
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for (label i = 1; i < layer.size()-1; i++)
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// Layer contains both original boundary face and new boundary
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// face so is nLayers+1
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forAll(layer, i)
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{
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flaggedFaces[layer[i]] = true;
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faceRealThickness[layer[i]] = realThickness;
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}
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}
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}
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}
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bool Foam::autoLayerDriver::writeLayerData
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(
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const fvMesh& mesh,
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const labelList& patchIDs,
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const labelList& cellNLayers,
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const scalarField& faceWantedThickness,
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const scalarField& faceRealThickness
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) const
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{
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bool allOk = true;
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{
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label nAdded = 0;
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forAll(cellNLayers, cellI)
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{
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if (cellNLayers[cellI] > 0)
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{
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nAdded++;
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}
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}
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cellSet addedCellSet(mesh, "addedCells", nAdded);
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forAll(cellNLayers, cellI)
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{
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if (cellNLayers[cellI] > 0)
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{
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addedCellSet.insert(cellI);
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}
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}
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addedCellSet.instance() = meshRefiner_.timeName();
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Info<< "Writing "
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<< returnReduce(addedCellSet.size(), sumOp<label>())
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<< " added cells to cellSet "
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<< addedCellSet.name() << endl;
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bool ok = addedCellSet.write();
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allOk = allOk & ok;
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}
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{
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label nAdded = 0;
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forAll(faceRealThickness, faceI)
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{
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if (faceRealThickness[faceI] > 0)
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{
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nAdded++;
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}
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}
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faceSet layerFacesSet(mesh, "layerFaces", nAdded);
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forAll(faceRealThickness, faceI)
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{
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if (faceRealThickness[faceI] > 0)
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{
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layerFacesSet.insert(faceI);
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}
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}
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layerFacesSet.instance() = meshRefiner_.timeName();
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Info<< "Writing "
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<< returnReduce(layerFacesSet.size(), sumOp<label>())
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<< " faces inside added layer to faceSet "
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<< layerFacesSet.name() << endl;
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bool ok = layerFacesSet.write();
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allOk = allOk & ok;
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}
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{
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volScalarField fld
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(
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IOobject
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(
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"nSurfaceLayers",
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mesh.time().timeName(),
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mesh,
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IOobject::NO_READ,
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IOobject::AUTO_WRITE,
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false
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),
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mesh,
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dimensionedScalar("zero", dimless, 0),
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fixedValueFvPatchScalarField::typeName
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);
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const polyBoundaryMesh& pbm = mesh.boundaryMesh();
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forAll(patchIDs, i)
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{
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label patchI = patchIDs[i];
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const polyPatch& pp = pbm[patchI];
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const labelList& faceCells = pp.faceCells();
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scalarField pfld(faceCells.size());
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forAll(faceCells, i)
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{
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pfld[i] = cellNLayers[faceCells[i]];
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}
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fld.boundaryField()[patchI] == pfld;
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}
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Info<< "Writing volScalarField " << fld.name()
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<< " with actual number of layers" << endl;
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bool ok = fld.write();
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allOk = allOk & ok;
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}
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{
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volScalarField fld
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(
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IOobject
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(
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"wantedThickness",
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mesh.time().timeName(),
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mesh,
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IOobject::NO_READ,
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IOobject::AUTO_WRITE,
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false
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),
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mesh,
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dimensionedScalar("zero", dimless, 0),
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fixedValueFvPatchScalarField::typeName
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);
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const polyBoundaryMesh& pbm = mesh.boundaryMesh();
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forAll(patchIDs, i)
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{
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label patchI = patchIDs[i];
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fld.boundaryField()[patchI] == pbm[patchI].patchSlice
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(
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faceWantedThickness
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);
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}
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Info<< "Writing volScalarField " << fld.name()
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<< " with wanted thickness" << endl;
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bool ok = fld.write();
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allOk = allOk & ok;
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}
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{
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volScalarField fld
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(
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IOobject
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(
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"thickness",
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mesh.time().timeName(),
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mesh,
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IOobject::NO_READ,
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IOobject::AUTO_WRITE,
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false
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),
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mesh,
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dimensionedScalar("zero", dimless, 0),
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fixedValueFvPatchScalarField::typeName
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);
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const polyBoundaryMesh& pbm = mesh.boundaryMesh();
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forAll(patchIDs, i)
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{
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label patchI = patchIDs[i];
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fld.boundaryField()[patchI] == pbm[patchI].patchSlice
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(
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faceRealThickness
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);
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}
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Info<< "Writing volScalarField " << fld.name()
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<< " with layer thickness" << endl;
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bool ok = fld.write();
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allOk = allOk & ok;
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}
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return allOk;
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}
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// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
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Foam::autoLayerDriver::autoLayerDriver
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@ -2618,7 +2814,7 @@ void Foam::autoLayerDriver::addLayers
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labelList patchNLayers(pp().nPoints(), 0);
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// Ideal number of cells added
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label nIdealAddedCells = 0;
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label nIdealTotAddedCells = 0;
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// Whether to add edge for all pp.localPoints.
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List<extrudeMode> extrudeStatus(pp().nPoints(), EXTRUDE);
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@ -2637,7 +2833,7 @@ void Foam::autoLayerDriver::addLayers
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patchDisp,
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patchNLayers,
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extrudeStatus,
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nIdealAddedCells
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nIdealTotAddedCells
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);
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// Precalculate mesh edge labels for patch edges
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@ -2835,11 +3031,20 @@ void Foam::autoLayerDriver::addLayers
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// Saved old points
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pointField oldPoints(mesh.points());
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// Last set of topology changes. (changing mesh clears out polyTopoChange)
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// Current set of topology changes. (changing mesh clears out
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// polyTopoChange)
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polyTopoChange savedMeshMod(mesh.boundaryMesh().size());
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// Per cell 0 or number of layers in the cell column it is part of
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labelList cellNLayers;
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// Per face actual overall layer thickness
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scalarField faceRealThickness;
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// Per face wanted overall layer thickness
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scalarField faceWantedThickness(mesh.nFaces(), 0.0);
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{
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UIndirectList<scalar>(faceWantedThickness, pp().addressing()) =
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avgPointData(pp, thickness);
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}
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boolList flaggedCells;
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boolList flaggedFaces;
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for (label iteration = 0; iteration < layerParams.nLayerIter(); iteration++)
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{
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@ -3088,35 +3293,52 @@ void Foam::autoLayerDriver::addLayers
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(
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newMesh,
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addLayer,
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flaggedCells,
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flaggedFaces
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avgPointData(pp, mag(patchDisp))(), // current thickness
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cellNLayers,
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faceRealThickness
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);
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// Count number of added cells
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label nAddedCells = 0;
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forAll(cellNLayers, cellI)
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{
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if (cellNLayers[cellI] > 0)
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{
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nAddedCells++;
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}
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}
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if (debug&meshRefinement::MESH)
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{
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Info<< "Writing layer mesh to time " << meshRefiner_.timeName()
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<< endl;
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newMesh.write();
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cellSet addedCellSet
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(
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newMesh,
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"addedCells",
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findIndices(flaggedCells, true)
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);
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cellSet addedCellSet(newMesh," addedCells", nAddedCells);
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forAll(cellNLayers, cellI)
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{
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if (cellNLayers[cellI] > 0)
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{
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addedCellSet.insert(cellI);
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}
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}
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addedCellSet.instance() = meshRefiner_.timeName();
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Info<< "Writing "
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<< returnReduce(addedCellSet.size(), sumOp<label>())
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<< " added cells to cellSet "
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<< addedCellSet.name() << endl;
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<< " added cells to cellSet " << addedCellSet.name() << endl;
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addedCellSet.write();
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faceSet layerFacesSet
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(
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newMesh,
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"layerFaces",
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findIndices(flaggedCells, true)
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);
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faceSet layerFacesSet(newMesh, "layerFaces", newMesh.nFaces()/100);
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forAll(faceRealThickness, faceI)
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{
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if (faceRealThickness[faceI] > 0)
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{
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layerFacesSet.insert(faceI);
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}
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}
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layerFacesSet.instance() = meshRefiner_.timeName();
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Info<< "Writing "
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<< returnReduce(layerFacesSet.size(), sumOp<label>())
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@ -3140,26 +3362,17 @@ void Foam::autoLayerDriver::addLayers
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extrudeStatus
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);
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label nExtruded = countExtrusion(pp, extrudeStatus);
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label nTotExtruded = countExtrusion(pp, extrudeStatus);
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label nTotFaces = returnReduce(pp().size(), sumOp<label>());
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label nAddedCells = 0;
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{
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forAll(flaggedCells, cellI)
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{
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if (flaggedCells[cellI])
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{
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nAddedCells++;
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}
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}
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reduce(nAddedCells, sumOp<label>());
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}
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Info<< "Extruding " << nExtruded
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label nTotAddedCells = returnReduce(nAddedCells, sumOp<label>());
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Info<< "Extruding " << nTotExtruded
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<< " out of " << nTotFaces
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<< " faces (" << 100.0*nExtruded/nTotFaces << "%)."
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<< " faces (" << 100.0*nTotExtruded/nTotFaces << "%)."
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<< " Removed extrusion at " << nTotChanged << " faces."
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<< endl
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<< "Added " << nAddedCells << " out of " << nIdealAddedCells
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<< " cells (" << 100.0*nAddedCells/nIdealAddedCells << "%)."
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<< "Added " << nTotAddedCells << " out of " << nIdealTotAddedCells
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<< " cells (" << 100.0*nTotAddedCells/nIdealTotAddedCells << "%)."
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<< endl;
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if (nTotChanged == 0)
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@ -3217,6 +3430,8 @@ void Foam::autoLayerDriver::addLayers
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meshRefiner_.updateMesh(map, labelList(0));
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// Update numbering of faceWantedThickness
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meshRefinement::updateList(map().faceMap(), 0.0, faceWantedThickness);
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// Update numbering on baffles
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forAll(baffles, i)
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@ -3237,8 +3452,9 @@ void Foam::autoLayerDriver::addLayers
|
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autoPtr<mapPolyMesh> map = meshRefiner_.mergeBaffles(baffles);
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inplaceReorder(map().reverseCellMap(), flaggedCells);
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inplaceReorder(map().reverseFaceMap(), flaggedFaces);
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inplaceReorder(map().reverseCellMap(), cellNLayers);
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inplaceReorder(map().reverseFaceMap(), faceWantedThickness);
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inplaceReorder(map().reverseFaceMap(), faceRealThickness);
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Info<< "Converted baffles in = "
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<< meshRefiner_.mesh().time().cpuTimeIncrement()
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@ -3272,29 +3488,23 @@ void Foam::autoLayerDriver::addLayers
|
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);
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// Re-distribute flag of layer faces and cells
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map().distributeCellData(flaggedCells);
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map().distributeFaceData(flaggedFaces);
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map().distributeCellData(cellNLayers);
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map().distributeFaceData(faceWantedThickness);
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map().distributeFaceData(faceRealThickness);
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}
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// Write mesh
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// ~~~~~~~~~~
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// Write mesh data
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// ~~~~~~~~~~~~~~~
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cellSet addedCellSet(mesh, "addedCells", findIndices(flaggedCells, true));
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addedCellSet.instance() = meshRefiner_.timeName();
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Info<< "Writing "
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<< returnReduce(addedCellSet.size(), sumOp<label>())
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<< " added cells to cellSet "
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<< addedCellSet.name() << endl;
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addedCellSet.write();
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faceSet layerFacesSet(mesh, "layerFaces", findIndices(flaggedFaces, true));
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layerFacesSet.instance() = meshRefiner_.timeName();
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Info<< "Writing "
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<< returnReduce(layerFacesSet.size(), sumOp<label>())
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<< " faces inside added layer to faceSet "
|
||||
<< layerFacesSet.name() << endl;
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||||
layerFacesSet.write();
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||||
writeLayerData
|
||||
(
|
||||
mesh,
|
||||
patchIDs,
|
||||
cellNLayers,
|
||||
faceWantedThickness,
|
||||
faceRealThickness
|
||||
);
|
||||
}
|
||||
|
||||
|
||||
|
||||
@ -120,6 +120,13 @@ class autoLayerDriver
|
||||
const List<extrudeMode>&
|
||||
);
|
||||
|
||||
//- Average point wise data to face wise
|
||||
static tmp<scalarField> avgPointData
|
||||
(
|
||||
const indirectPrimitivePatch&,
|
||||
const scalarField& pointFld
|
||||
);
|
||||
|
||||
//- Check that primitivePatch is not multiply connected.
|
||||
// Collect non-manifold points in pointSet.
|
||||
static void checkManifold
|
||||
@ -367,10 +374,23 @@ class autoLayerDriver
|
||||
(
|
||||
const polyMesh&,
|
||||
const addPatchCellLayer&,
|
||||
boolList&,
|
||||
boolList&
|
||||
const scalarField& oldRealThickness,
|
||||
|
||||
labelList& cellStatus,
|
||||
scalarField& faceRealThickness
|
||||
);
|
||||
|
||||
//- Write cellSet,faceSet for layers
|
||||
bool writeLayerData
|
||||
(
|
||||
const fvMesh& mesh,
|
||||
const labelList& patchIDs,
|
||||
const labelList& cellNLayers,
|
||||
const scalarField& faceWantedThickness,
|
||||
const scalarField& faceRealThickness
|
||||
) const;
|
||||
|
||||
|
||||
// Mesh shrinking (to create space for layers)
|
||||
|
||||
//- Average field (over all subset of mesh points) by
|
||||
|
||||
@ -235,6 +235,12 @@ Foam::layerParameters::layerParameters
|
||||
Info<< "Layer thickness specified as final layer and expansion ratio."
|
||||
<< endl;
|
||||
}
|
||||
else if (haveTotal && haveExp)
|
||||
{
|
||||
layerSpec_ = TOTAL_AND_EXPANSION;
|
||||
Info<< "Layer thickness specified as overall thickness"
|
||||
<< " and expansion ratio." << endl;
|
||||
}
|
||||
|
||||
|
||||
if (layerSpec_ == ILLEGAL || nSpec != 2)
|
||||
@ -253,7 +259,9 @@ Foam::layerParameters::layerParameters
|
||||
<< " final layer thickness ('finalLayerThickness')"
|
||||
<< " and expansion ratio ('expansionRatio') or" << nl
|
||||
<< " final layer thickness ('finalLayerThickness')"
|
||||
<< " and overall thickness ('thickness')"
|
||||
<< " and overall thickness ('thickness') or" << nl
|
||||
<< " overall thickness ('thickness')"
|
||||
<< " and expansion ratio ('expansionRatio'"
|
||||
<< exit(FatalIOError);
|
||||
}
|
||||
|
||||
@ -354,6 +362,19 @@ Foam::layerParameters::layerParameters
|
||||
);
|
||||
break;
|
||||
|
||||
case TOTAL_AND_EXPANSION:
|
||||
layerDict.readIfPresent
|
||||
(
|
||||
"thickness",
|
||||
thickness_[patchI]
|
||||
);
|
||||
layerDict.readIfPresent
|
||||
(
|
||||
"expansionRatio",
|
||||
expansionRatio_[patchI]
|
||||
);
|
||||
break;
|
||||
|
||||
default:
|
||||
FatalIOErrorIn
|
||||
(
|
||||
@ -390,6 +411,7 @@ Foam::scalar Foam::layerParameters::layerThickness
|
||||
{
|
||||
case FIRST_AND_TOTAL:
|
||||
case FINAL_AND_TOTAL:
|
||||
case TOTAL_AND_EXPANSION:
|
||||
{
|
||||
return totalThickness;
|
||||
}
|
||||
@ -450,6 +472,7 @@ Foam::scalar Foam::layerParameters::layerExpansionRatio
|
||||
{
|
||||
case FIRST_AND_EXPANSION:
|
||||
case FINAL_AND_EXPANSION:
|
||||
case TOTAL_AND_EXPANSION:
|
||||
{
|
||||
return expansionRatio;
|
||||
}
|
||||
@ -524,6 +547,18 @@ Foam::scalar Foam::layerParameters::firstLayerThickness
|
||||
}
|
||||
break;
|
||||
|
||||
case TOTAL_AND_EXPANSION:
|
||||
{
|
||||
scalar r = finalLayerThicknessRatio
|
||||
(
|
||||
nLayers,
|
||||
expansionRatio
|
||||
);
|
||||
scalar finalThickness = r*totalThickness;
|
||||
return finalThickness/pow(expansionRatio, nLayers-1);
|
||||
}
|
||||
break;
|
||||
|
||||
default:
|
||||
{
|
||||
FatalErrorIn("layerParameters::layerThickness(..)")
|
||||
|
||||
@ -64,13 +64,15 @@ public:
|
||||
// - first and expansion ratio specified
|
||||
// - final and total thickness specified
|
||||
// - final and expansion ratio specified
|
||||
// - total thickness and expansion ratio specified
|
||||
enum layerSpecification
|
||||
{
|
||||
ILLEGAL,
|
||||
FIRST_AND_TOTAL,
|
||||
FIRST_AND_EXPANSION,
|
||||
FINAL_AND_TOTAL,
|
||||
FINAL_AND_EXPANSION
|
||||
FINAL_AND_EXPANSION,
|
||||
TOTAL_AND_EXPANSION
|
||||
};
|
||||
|
||||
|
||||
|
||||
Reference in New Issue
Block a user