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Merge branch 'molecularDynamics' of ssh://graham@hunt//home/noisy2/OpenFOAM/OpenFOAM-dev into molecularDynamics

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graham
2008-07-24 14:09:23 +01:00
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84
applications/utilities/mesh/generation/CV2DMesher/CGALTriangulation2Ddefs.H
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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Typedefs
CGALTriangulation2Ddefs
Description
CGAL data structures used for 2D Delaunay meshing.
Define CGAL_INEXACT to use Exact_predicates_inexact_constructions kernel
otherwise the more robust but much less efficient
Exact_predicates_exact_constructions will be used.
Define CGAL_HIERARCHY to use hierarchical Delaunay triangulation which is
faster but uses more memory than the standard Delaunay triangulation.
\*---------------------------------------------------------------------------*/
#ifndef CGALTriangulation2Ddefs_H
#define CGALTriangulation2Ddefs_H
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#include "CGAL/Delaunay_triangulation_2.h"
#include "indexedVertex.H"
#include "indexedFace.H"
#ifdef CGAL_INEXACT
// Fast kernel using a double as the storage type but the triangulation
// may fail
#include "CGAL/Exact_predicates_inexact_constructions_kernel.h"
typedef CGAL::Exact_predicates_inexact_constructions_kernel K;
#else
// Very robust but expensive kernel
#include "CGAL/Exact_predicates_exact_constructions_kernel.h"
typedef CGAL::Exact_predicates_exact_constructions_kernel K;
#endif
typedef CGAL::indexedVertex<K> Vb;
typedef CGAL::indexedFace<K> Fb;
#ifdef CGAL_HIERARCHY
// Data structures for hierarchical Delaunay triangulation which is more
// efficient but also uses more storage
#include "CGAL/Triangulation_hierarchy_2.h"
typedef CGAL::Triangulation_hierarchy_vertex_base_2<Vb> Vbh;
typedef CGAL::Triangulation_data_structure_2<Vbh, Fb> Tds;
typedef CGAL::Delaunay_triangulation_2<K, Tds> Triangulation;
typedef CGAL::Triangulation_hierarchy_2<Triangulation> HTriangulation;
#else
// Data structures for standard Delaunay triangulation
typedef CGAL::Triangulation_data_structure_2<Vb, Fb> Tds;
typedef CGAL::Delaunay_triangulation_2<K, Tds> Triangulation;
typedef Triangulation HTriangulation;
#endif
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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applications/utilities/mesh/generation/CV2DMesher/CV2D.C
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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV2D.H"
#include "Random.H"
#include "transform.H"
#include "IFstream.H"
#include "uint.H"
#include "ulong.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
void Foam::CV2D::insertBoundingBox()
{
Info<< "insertBoundingBox: creating bounding mesh" << endl;
scalar bigSpan = 10*tols_.span;
insertPoint(point2D(-bigSpan, -bigSpan), Vb::FAR_POINT);
insertPoint(point2D(-bigSpan, bigSpan), Vb::FAR_POINT);
insertPoint(point2D(bigSpan, -bigSpan), Vb::FAR_POINT);
insertPoint(point2D(bigSpan, bigSpan), Vb::FAR_POINT);
}
void Foam::CV2D::fast_restore_Delaunay(Vertex_handle vh)
{
int i;
Face_handle f = vh->face(), next, start(f);
do
{
i=f->index(vh);
if (!is_infinite(f))
{
if (!internal_flip(f, cw(i))) external_flip(f, i);
if (f->neighbor(i) == start) start = f;
}
f = f->neighbor(cw(i));
} while (f != start);
}
void Foam::CV2D::external_flip(Face_handle& f, int i)
{
Face_handle n = f->neighbor(i);
if
(
CGAL::ON_POSITIVE_SIDE
!= side_of_oriented_circle(n, f->vertex(i)->point())
) return;
flip(f, i);
i = n->index(f->vertex(i));
external_flip(n, i);
}
bool Foam::CV2D::internal_flip(Face_handle& f, int i)
{
Face_handle n = f->neighbor(i);
if
(
CGAL::ON_POSITIVE_SIDE
!= side_of_oriented_circle(n, f->vertex(i)->point())
)
{
return false;
}
flip(f, i);
return true;
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::CV2D::CV2D
(
const dictionary& controlDict,
const querySurface& qSurf
)
:
HTriangulation(),
qSurf_(qSurf),
controls_(controlDict),
tols_(controlDict, controls_.minCellSize, qSurf.bb()),
z_((1.0/3.0)*(qSurf_.bb().min().z() + qSurf_.bb().max().z())),
startOfInternalPoints_(0),
startOfSurfacePointPairs_(0),
startOfBoundaryConformPointPairs_(0)
{
insertBoundingBox();
insertFeaturePoints();
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::CV2D::~CV2D()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
void Foam::CV2D::insertPoints
(
const point2DField& points,
const scalar nearness
)
{
Info<< "insertInitialPoints(const point2DField& points): ";
startOfInternalPoints_ = number_of_vertices();
label nVert = startOfInternalPoints_;
// Add the points and index them
forAll(points, i)
{
const point2D& p = points[i];
if (qSurf_.wellInside(toPoint3D(p), nearness))
{
insert(toPoint(p))->index() = nVert++;
}
else
{
Warning
<< "Rejecting point " << p << " outside surface" << endl;
}
}
Info<< nVert << " vertices inserted" << endl;
if (controls_.writeInitialTriangulation)
{
// Checking validity of triangulation
assert(is_valid());
writeTriangles("initial_triangles.obj", true);
writeFaces("initial_faces.obj", true);
}
}
void Foam::CV2D::insertPoints(const fileName& pointFileName)
{
IFstream pointsFile(pointFileName);
if (pointsFile.good())
{
insertPoints(point2DField(pointsFile), 0.5*controls_.minCellSize2);
}
else
{
FatalErrorIn("insertInitialPoints")
<< "Could not open pointsFile " << pointFileName
<< exit(FatalError);
}
}
void Foam::CV2D::insertGrid()
{
Info<< "insertInitialGrid: ";
startOfInternalPoints_ = number_of_vertices();
label nVert = startOfInternalPoints_;
scalar x0 = qSurf_.bb().min().x();
scalar xR = qSurf_.bb().max().x() - x0;
int ni = int(xR/controls_.minCellSize) + 1;
scalar deltax = xR/ni;
scalar y0 = qSurf_.bb().min().y();
scalar yR = qSurf_.bb().max().y() - y0;
int nj = int(yR/controls_.minCellSize) + 1;
scalar deltay = yR/nj;
Random rndGen(1321);
scalar pert = controls_.randomPurturbation*min(deltax, deltay);
for (int i=0; i<ni; i++)
{
for (int j=0; j<nj; j++)
{
point p(x0 + i*deltax, y0 + j*deltay, 0);
if (controls_.randomiseInitialGrid)
{
p.x() += pert*(rndGen.scalar01() - 0.5);
p.y() += pert*(rndGen.scalar01() - 0.5);
}
if (qSurf_.wellInside(p, 0.5*controls_.minCellSize2))
{
insert(Point(p.x(), p.y()))->index() = nVert++;
}
}
}
Info<< nVert << " vertices inserted" << endl;
if (controls_.writeInitialTriangulation)
{
// Checking validity of triangulation
assert(is_valid());
writeTriangles("initial_triangles.obj", true);
writeFaces("initial_faces.obj", true);
}
}
void Foam::CV2D::insertSurfacePointPairs()
{
startOfSurfacePointPairs_ = number_of_vertices();
if (controls_.insertSurfaceNearestPointPairs)
{
insertSurfaceNearestPointPairs();
}
if (controls_.writeNearestTriangulation)
{
writeFaces("near_allFaces.obj", false);
writeFaces("near_faces.obj", true);
writeTriangles("near_triangles.obj", true);
}
// Insertion of point-pais for near-points may cause protrusions
// so insertBoundaryConformPointPairs must be executed last
if (controls_.insertSurfaceNearPointPairs)
{
insertSurfaceNearPointPairs();
}
startOfBoundaryConformPointPairs_ = number_of_vertices();
}
void Foam::CV2D::boundaryConform()
{
if (!controls_.insertSurfaceNearestPointPairs)
{
markNearBoundaryPoints();
}
// Mark all the faces as SAVE_CHANGED
for
(
Triangulation::Finite_faces_iterator fit = finite_faces_begin();
fit != finite_faces_end();
fit++
)
{
fit->faceIndex() = Fb::SAVE_CHANGED;
}
for (label iter=1; iter<=controls_.maxBoundaryConformingIter; iter++)
{
label nIntersections = insertBoundaryConformPointPairs
(
"surfaceIntersections_" + Foam::name(iter) + ".obj"
);
if (nIntersections == 0)
{
break;
}
else
{
Info<< "BC iteration " << iter << ": "
<< nIntersections << " point-pairs inserted" << endl;
}
// Any faces changed by insertBoundaryConformPointPairs will now
// be marked CHANGED, mark those as SAVE_CHANGED and those that
// remained SAVE_CHANGED as UNCHANGED
for
(
Triangulation::Finite_faces_iterator fit = finite_faces_begin();
fit != finite_faces_end();
fit++
)
{
if (fit->faceIndex() == Fb::SAVE_CHANGED)
{
fit->faceIndex() = Fb::UNCHANGED;
}
else if (fit->faceIndex() == Fb::CHANGED)
{
fit->faceIndex() = Fb::SAVE_CHANGED;
}
}
}
Info<< nl;
}
void Foam::CV2D::removeSurfacePointPairs()
{
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (vit->index() >= startOfSurfacePointPairs_)
{
remove(vit);
}
}
}
void Foam::CV2D::newPoints(const scalar relaxation)
{
Info<< "newPointsFromVertices: ";
const vectorField& faceNormals = qSurf_.faceNormals();
// Initialise the total displacement and its distance for writing out
vector2D totalDisp = vector2D::zero;
scalar totalDist = 0;
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (vit->internalPoint())
{
// Current dual-cell defining vertex ("centre")
point2DFromPoint defVert0 = toPoint2D(vit->point());
Triangulation::Edge_circulator ec = incident_edges(vit);
Triangulation::Edge_circulator ecStart = ec;
// Circulate around the edges to find the first which is not
// infinite
do
{
if (!is_infinite(ec)) break;
} while (++ec != ecStart);
// Store the start-end of the first non-infinte edge
point2D de0 = toPoint2D(circumcenter(ec->first));
// Keep track of the maximum edge length^2
scalar maxEdgeLen2 = 0.0;
// Keep track of the index of the longest edge
label edgecd0i = -1;
// Edge counter
label edgei = 0;
do
{
if (!is_infinite(ec))
{
// Get the end of the current edge
point2D de1 = toPoint2D
(
circumcenter(ec->first->neighbor(ec->second))
);
// Store the current edge vector
edges[edgei] = de1 - de0;
// Store the edge mid-point in the vertices array
vertices[edgei] = 0.5*(de1 + de0);
// Move the current edge end into the edge start for the
// next iteration
de0 = de1;
// Keep track of the longest edge
scalar edgeLen2 = magSqr(edges[edgei]);
if (edgeLen2 > maxEdgeLen2)
{
maxEdgeLen2 = edgeLen2;
edgecd0i = edgei;
}
edgei++;
}
} while (++ec != ecStart);
// Initialise cd0 such that the mesh will align
// in in the x-y directions
vector2D cd0(1, 0);
if (controls_.relaxOrientation)
{
// Get the longest edge from the array and use as the primary
// direction of the coordinate system of the "square" cell
cd0 = edges[edgecd0i];
}
if (controls_.nearWallAlignedDist > 0)
{
pointIndexHit pHit = qSurf_.tree().findNearest
(
toPoint3D(defVert0),
controls_.nearWallAlignedDist2
);
if (pHit.hit())
{
cd0 = toPoint2D(faceNormals[pHit.index()]);
}
}
// Rotate by 45deg needed to create an averaging procedure which
// encourages the cells to be square
cd0 = vector2D(cd0.x() + cd0.y(), cd0.y() - cd0.x());
// Normalise the primary coordinate direction
cd0 /= mag(cd0);
// Calculate the orthogonal coordinate direction
vector2D cd1(-cd0.y(), cd0.x());
// Restart the circulator
ec = ecStart;
// ... and the counter
edgei = 0;
// Initialise the displacement for the centre and sum-weights
vector2D disp = vector2D::zero;
scalar sumw = 0;
do
{
if (!is_infinite(ec))
{
// Pick up the current edge
const vector2D& ei = edges[edgei];
// Calculate the centre to edge-centre vector
vector2D deltai = vertices[edgei] - defVert0;
// Set the weight for this edge contribution
scalar w = 1;
if (controls_.squares)
{
w = magSqr(deltai.x()*ei.y() - deltai.y()*ei.x());
// alternative weights
//w = mag(deltai.x()*ei.y() - deltai.y()*ei.x());
//w = magSqr(ei)*mag(deltai);
// Use the following for an ~square mesh
// Find the coordinate contributions for this edge delta
scalar cd0deltai = cd0 & deltai;
scalar cd1deltai = cd1 & deltai;
// Create a "square" displacement
if (mag(cd0deltai) > mag(cd1deltai))
{
disp += (w*cd0deltai)*cd0;
}
else
{
disp += (w*cd1deltai)*cd1;
}
}
else
{
// Use this for a hexagon/pentagon mesh
disp += w*deltai;
}
// Sum the weights
sumw += w;
}
else
{
FatalErrorIn("CV2D::newPoints() const")
<< "Infinite triangle found in internal mesh"
<< exit(FatalError);
}
edgei++;
} while (++ec != ecStart);
// Calculate the average displacement
disp /= sumw;
totalDisp += disp;
totalDist += mag(disp);
// Move the point by a fraction of the average displacement
movePoint(vit, defVert0 + relaxation*disp);
}
}
Info << "\nTotal displacement = " << totalDisp
<< " total distance = " << totalDist << endl;
}
void Foam::CV2D::moveInternalPoints(const point2DField& newPoints)
{
label pointI = 0;
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (vit->internalPoint())
{
movePoint(vit, newPoints[pointI++]);
}
}
}
void Foam::CV2D::write() const
{
if (controls_.writeFinalTriangulation)
{
writeFaces("allFaces.obj", false);
writeFaces("faces.obj", true);
writeTriangles("allTriangles.obj", false);
writeTriangles("triangles.obj", true);
writePatch("patch.pch");
}
}
// ************************************************************************* //

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applications/utilities/mesh/generation/CV2DMesher/CV2D.H
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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Class
CV2D
Description
Conformal-Voronoi 2D automatic mesher with grid or read initial points
and point position relaxation with optional "squarification".
There are a substantial number of options to this mesher read from
CV2DMesherDict file e.g.:
// Min cell size used in tolerances when inserting points for
// boundary conforming.
// Also used to as the grid spacing usind in insertGrid.
minCellSize 0.05;
// Feature angle used to inser feature points
// 0 = all features, 180 = no features
featureAngle 45;
// Maximum quadrant angle allowed at a concave corner before
// additional "mitering" lines are added
maxQuadAngle 110;
// Should the mesh be square-dominated or of unbiased hexagons
squares yes;
// Near-wall region where cells are aligned with the wall specified as a
// number of cell layers
nearWallAlignedDist 3;
// Chose if the cell orientation should relax during the iterations
// or remain fixed to the x-y directions
relaxOrientation no;
// Insert near-boundary point mirror or point-pairs
insertSurfaceNearestPointPairs yes;
// Mirror near-boundary points rather than insert point-pairs
mirrorPoints no;
// Insert point-pairs vor dual-cell vertices very near the surface
insertSurfaceNearPointPairs yes;
// Choose if to randomise the initial grid created by insertGrid.
randomiseInitialGrid yes;
// Perturbation fraction, 1 = cell-size.
randomPurturbation 0.1;
// Number of relaxation iterations.
nIterations 5;
// Relaxation factor at the start of the iteration sequence.
// 0.5 is a sensible maximum and < 0.2 converges better.
relaxationFactorStart 0.8;
// Relaxation factor at the end of the iteration sequence.
// Should be <= relaxationFactorStart
relaxationFactorEnd 0;
writeInitialTriangulation no;
writeFeatureTriangulation no;
writeNearestTriangulation no;
writeInsertedPointPairs no;
writeFinalTriangulation yes;
// Maximum number of iterations used in boundaryConform.
maxBoundaryConformingIter 5;
minEdgeLenCoeff 0.5;
maxNotchLenCoeff 0.3;
minNearPointDistCoeff 0.25;
ppDistCoeff 0.05;
SourceFiles
CGALTriangulation2Ddefs.H
indexedVertex.H
indexedFace.H
CV2DI.H
CV2D.C
CV2DIO.C
tolerances.C
controls.C
insertFeaturePoints.C
insertSurfaceNearestPointPairs.C
insertSurfaceNearPointPairs.C
insertBoundaryConformPointPairs.C
\*---------------------------------------------------------------------------*/
#ifndef CV2D_H
#define CV2D_H
#define CGAL_INEXACT
#define CGAL_HIERARCHY
#include "CGALTriangulation2Ddefs.H"
#include "querySurface.H"
#include "point2DFieldFwd.H"
#include "dictionary.H"
#include "Switch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class CV2D Declaration
\*---------------------------------------------------------------------------*/
class CV2D
:
public HTriangulation
{
public:
class controls
{
public:
//- Minimum cell size below which protusions through the surface are
// not split
scalar minCellSize;
//- Square of minCellSize
scalar minCellSize2;
//- The feature angle used to select corners to be
// explicitly represented in the mesh.
// 0 = all features, 180 = no features
scalar featAngle;
//- Maximum quadrant angle allowed at a concave corner before
// additional "mitering" lines are added
scalar maxQuadAngle;
//- Should the mesh be square-dominated or of unbiased hexagons
Switch squares;
//- Near-wall region where cells are aligned with the wall
scalar nearWallAlignedDist;
//- Square of nearWallAlignedDist
scalar nearWallAlignedDist2;
//- Chose if the cell orientation should relax during the iterations
// or remain fixed to the x-y directions
Switch relaxOrientation;
//- Insert near-boundary point mirror or point-pairs
Switch insertSurfaceNearestPointPairs;
//- Mirror near-boundary points rather than insert point-pairs
Switch mirrorPoints;
//- Insert point-pairs vor dual-cell vertices very near the surface
Switch insertSurfaceNearPointPairs;
Switch writeInitialTriangulation;
Switch writeFeatureTriangulation;
Switch writeNearestTriangulation;
Switch writeInsertedPointPairs;
Switch writeFinalTriangulation;
Switch randomiseInitialGrid;
scalar randomPurturbation;
label maxBoundaryConformingIter;
//- Relaxation factor at the start of the iteration
scalar relaxationFactorStart;
//- Relaxation factor at the end of the iteration
scalar relaxationFactorEnd;
controls(const dictionary& controlDict);
};
class tolerances
{
public:
//- Maximum cartesian span of the geometry
scalar span;
//- Square of span
scalar span2;
//- Minumum edge-length of the cell size below which protusions
// through the surface are not split
scalar minEdgeLen;
//- Square of minEdgeLen
scalar minEdgeLen2;
//- Maximum notch size below which protusions into the surface are
// not filled
scalar maxNotchLen;
//- Square of maxNotchLen
scalar maxNotchLen2;
//- The minimum distance alowed between a dual-cell vertex
// and the surface before a point-pair is introduced
scalar minNearPointDist;
//- Square of minNearPoint
scalar minNearPointDist2;
//- Distance between boundary conforming point-pairs
scalar ppDist;
//- Square of ppDist
scalar ppDist2;
tolerances
(
const dictionary& controlDict,
scalar minCellSize,
const boundBox&
);
};
private:
// Private data
//- The surface to mesh
const querySurface& qSurf_;
//- Meshing controls
controls controls_;
//- Meshing tolerances
tolerances tols_;
//- z-level
scalar z_;
//- Keep track of the start of the internal points
label startOfInternalPoints_;
//- Keep track of the start of the surface point-pairs
label startOfSurfacePointPairs_;
//- Keep track of the boundary conform point-pairs
// stored after the insertion of the surface point-pairs in case
// the boundary conform function is called more than once without
// removing and insertin the surface point-pairs
label startOfBoundaryConformPointPairs_;
//- Temporary storage for a dual-cell
static const label maxNvert = 20;
mutable point2D vertices[maxNvert+1];
mutable vector2D edges[maxNvert+1];
// Private Member Functions
//- Disallow default bitwise copy construct
CV2D(const CV2D&);
//- Disallow default bitwise assignment
void operator=(const CV2D&);
//- Insert point and return it's index
inline label insertPoint
(
const point2D& pt,
const label type
);
inline bool insertMirrorPoint
(
const point2D& nearSurfPt,
const point2D& surfPt
);
//- Insert a point-pair at a distance ppDist either side of
// surface point point surfPt in the direction n
inline void insertPointPair
(
const scalar mirrorDist,
const point2D& surfPt,
const vector2D& n
);
//- Create the initial mesh from the bounding-box
void insertBoundingBox();
//- Insert point groups at the feature points.
void insertFeaturePoints();
//- Insert point-pairs at the given set of points using the surface
// normals corresponding to the given set of surface triangles
// and write the inserted point locations to the given file.
void insertPointPairs
(
const DynamicList<point2D>& nearSurfacePoints,
const DynamicList<point2D>& surfacePoints,
const DynamicList<label>& surfaceTris,
const fileName fName
);
//- Check to see if dual cell specified by given vertex iterator
// intersects the boundary and hence reqires a point-pair.
bool dualCellSurfaceIntersection
(
const Triangulation::Finite_vertices_iterator& vit
) const;
//- Insert point-pairs at the nearest points on the surface to the
// control vertex of dual-cells which intersect the boundary in order
// to provide a boundary-layer mesh.
// NB: This is not guaranteed to close the boundary
void insertSurfaceNearestPointPairs();
//- Insert point-pairs at small duak-cell edges on the surface in order
// to improve the boundary-layer mesh generated by
// insertSurfaceNearestPointPairs.
void insertSurfaceNearPointPairs();
//- Insert point-pair and correcting the Finite_vertices_iterator
// to account for the additional vertices
void insertPointPair
(
Triangulation::Finite_vertices_iterator& vit,
const point2D& p,
const label trii
);
//- Insert point-pair at the best intersection point between the lines
// from the dual-cell real centroid and it's vertices and the surface.
bool insertPointPairAtIntersection
(
Triangulation::Finite_vertices_iterator& vit,
const point2D& defVert,
const point2D vertices[],
const scalar maxProtSize
);
//- Insert point-pairs corresponding to dual-cells which intersect
// the boundary surface
label insertBoundaryConformPointPairs(const fileName& fName);
void markNearBoundaryPoints();
//- Restore the Delaunay contraint
void fast_restore_Delaunay(Vertex_handle vh);
// Flip operations used by fast_restore_Delaunay
void external_flip(Face_handle& f, int i);
bool internal_flip(Face_handle& f, int i);
public:
// Constructors
//- Construct for given surface
CV2D(const dictionary& controlDict, const querySurface& qSurf);
// Destructor
~CV2D();
// Member Functions
// Access
const controls& meshingControls() const
{
return controls_;
}
// Conversion functions between point2D, point and Point
inline const point2D& toPoint2D(const point&) const;
inline point toPoint3D(const point2D&) const;
# ifdef CGAL_INEXACT
typedef const point2D& point2DFromPoint;
typedef const Point& PointFromPoint2D;
# else
typedef point2D point2DFromPoint;
typedef Point PointFromPoint2D;
# endif
inline point2DFromPoint toPoint2D(const Point&) const;
inline PointFromPoint2D toPoint(const point2D&) const;
inline point toPoint3D(const Point&) const;
// Point insertion
//- Create the initial mesh from the given internal points.
// Points must be inside the boundary by at least nearness
// otherwise they are ignored.
void insertPoints
(
const point2DField& points,
const scalar nearness
);
//- Create the initial mesh from the internal points in the given
// file. Points outside the geometry are ignored.
void insertPoints(const fileName& pointFileName);
//- Create the initial mesh as a regular grid of points.
// Points outside the geometry are ignored.
void insertGrid();
//- Insert all surface point-pairs from
// insertSurfaceNearestPointPairs and
// findIntersectionForOutsideCentroid
void insertSurfacePointPairs();
//- Insert point-pairs where there are protrusions into
// or out of the surface
void boundaryConform();
// Point removal
//- Remove the point-pairs introduced by insertSurfacePointPairs
// and boundaryConform
void removeSurfacePointPairs();
// Point motion
inline void movePoint(const Vertex_handle& vh, const point2D& p);
//- Move the internal points to the given new locations and update
// the triangulation to ensure it is Delaunay
void moveInternalPoints(const point2DField& newPoints);
//- Calculate the displacements to create the new points
void newPoints(const scalar relaxation);
// Write
//- Write internal points to .obj file
void writePoints(const fileName& fName, bool internalOnly) const;
//- Write triangles as .obj file
void writeTriangles(const fileName& fName, bool internalOnly) const;
//- Write dual faces as .obj file
void writeFaces(const fileName& fName, bool internalOnly) const;
//- Calculates dual points (circumcentres of tets) and faces
// (point-cell walk of tets). Returns
// - dualPoints (in triangle ordering)
// - dualFaces (compacted)
void calcDual(point2DField& dualPoints, faceList& dualFaces) const;
//- Write patch
void writePatch(const fileName& fName) const;
void write() const;
};
inline bool boundaryTriangle(const CV2D::Face_handle fc);
inline bool outsideTriangle(const CV2D::Face_handle fc);
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#include "CV2DI.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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@ -1,169 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*---------------------------------------------------------------------------*/
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
inline Foam::label Foam::CV2D::insertPoint
(
const point2D& p,
const label type
)
{
uint nVert = number_of_vertices();
Vertex_handle vh = insert(toPoint(p));
if (nVert == number_of_vertices())
{
WarningIn("Foam::CV2D::insertPoint")
<< "Failed to insert point " << p << endl;
}
else
{
vh->index() = nVert;
vh->type() = type;
}
return vh->index();
}
inline bool Foam::CV2D::insertMirrorPoint
(
const point2D& nearSurfPt,
const point2D& surfPt
)
{
point2D mirrorPoint(2*surfPt - nearSurfPt);
if (qSurf_.outside(toPoint3D(mirrorPoint)))
{
insertPoint(mirrorPoint, Vb::MIRROR_POINT);
return true;
}
else
{
return false;
}
}
inline void Foam::CV2D::insertPointPair
(
const scalar ppDist,
const point2D& surfPt,
const vector2D& n
)
{
vector2D ppDistn = ppDist*n;
label master = insertPoint
(
surfPt - ppDistn,
number_of_vertices() + 1
);
insertPoint(surfPt + ppDistn, master);
}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
inline const Foam::point2D& Foam::CV2D::toPoint2D(const point& p) const
{
return reinterpret_cast<const point2D&>(p);
}
inline Foam::point Foam::CV2D::toPoint3D(const point2D& p) const
{
return point(p.x(), p.y(), z_);
}
#ifdef CGAL_INEXACT
inline Foam::CV2D::point2DFromPoint Foam::CV2D::toPoint2D(const Point& P) const
{
return reinterpret_cast<point2DFromPoint>(P);
}
inline Foam::CV2D::PointFromPoint2D Foam::CV2D::toPoint(const point2D& p) const
{
return reinterpret_cast<PointFromPoint2D>(p);
}
#else
inline Foam::CV2D::point2DFromPoint Foam::CV2D::toPoint2D(const Point& P) const
{
return point2D(CGAL::to_double(P.x()), CGAL::to_double(P.y()));
}
inline Foam::CV2D::PointFromPoint2D Foam::CV2D::toPoint(const point2D& p) const
{
return Point(p.x(), p.y());
}
#endif
inline Foam::point Foam::CV2D::toPoint3D(const Point& P) const
{
return point(CGAL::to_double(P.x()), CGAL::to_double(P.y()), z_);
}
inline void Foam::CV2D::movePoint(const Vertex_handle& vh, const point2D& p)
{
vh->set_point(toPoint(p));
fast_restore_Delaunay(vh);
}
// * * * * * * * * * * * * * * * Friend Functions * * * * * * * * * * * * * //
inline bool Foam::boundaryTriangle(const CV2D::Face_handle fc)
{
return boundaryTriangle
(
*fc->vertex(0),
*fc->vertex(1),
*fc->vertex(2)
);
}
inline bool Foam::outsideTriangle(const CV2D::Face_handle fc)
{
return outsideTriangle
(
*fc->vertex(0),
*fc->vertex(1),
*fc->vertex(2)
);
}
// ************************************************************************* //

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@ -1,285 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*---------------------------------------------------------------------------*/
#include "CV2D.H"
#include "OFstream.H"
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
void Foam::CV2D::writePoints(const fileName& fName, bool internalOnly) const
{
Info<< "Writing points to " << fName << nl << endl;
OFstream str(fName);
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (!internalOnly || vit->internalOrBoundaryPoint())
{
meshTools::writeOBJ(str, toPoint3D(vit->point()));
}
}
}
void Foam::CV2D::writeTriangles(const fileName& fName, bool internalOnly) const
{
Info<< "Writing triangles to " << fName << nl << endl;
OFstream str(fName);
labelList vertexMap(number_of_vertices());
label verti = 0;
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (!internalOnly || !vit->farPoint())
{
vertexMap[vit->index()] = verti++;
meshTools::writeOBJ(str, toPoint3D(vit->point()));
}
}
for
(
Triangulation::Finite_faces_iterator fit = finite_faces_begin();
fit != finite_faces_end();
++fit
)
{
if
(
!internalOnly
|| (
fit->vertex(0)->internalOrBoundaryPoint()
|| fit->vertex(1)->internalOrBoundaryPoint()
|| fit->vertex(2)->internalOrBoundaryPoint()
)
)
{
str << "f " << vertexMap[fit->vertex(0)->index()] + 1
<< ' ' << vertexMap[fit->vertex(1)->index()] + 1
<< ' ' << vertexMap[fit->vertex(2)->index()] + 1
<< nl;
}
}
}
void Foam::CV2D::writeFaces(const fileName& fName, bool internalOnly) const
{
Info<< "Writing dual faces to " << fName << nl << endl;
OFstream str(fName);
label dualVerti = 0;
for
(
Triangulation::Finite_faces_iterator fit = finite_faces_begin();
fit != finite_faces_end();
++fit
)
{
if
(
!internalOnly
|| (
fit->vertex(0)->internalOrBoundaryPoint()
|| fit->vertex(1)->internalOrBoundaryPoint()
|| fit->vertex(2)->internalOrBoundaryPoint()
)
)
{
fit->faceIndex() = dualVerti++;
meshTools::writeOBJ(str, toPoint3D(circumcenter(fit)));
}
else
{
fit->faceIndex() = -1;
}
}
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (!internalOnly || vit->internalOrBoundaryPoint())
{
Face_circulator fcStart = incident_faces(vit);
Face_circulator fc = fcStart;
str<< 'f';
do
{
if (!is_infinite(fc))
{
if (fc->faceIndex() < 0)
{
FatalErrorIn
(
"Foam::CV2D::writeFaces"
"(const fileName& fName, bool internalOnly)"
)<< "Dual face uses vertex defined by a triangle"
" defined by an external point"
<< exit(FatalError);
}
str<< ' ' << fc->faceIndex() + 1;
}
} while (++fc != fcStart);
str<< nl;
}
}
}
void Foam::CV2D::calcDual(point2DField& dualPoints, faceList& dualFaces) const
{
// Dual points stored in triangle order.
dualPoints.setSize(number_of_faces());
label dualVerti = 0;
for
(
Triangulation::Finite_faces_iterator fit = finite_faces_begin();
fit != finite_faces_end();
++fit
)
{
if
(
fit->vertex(0)->internalOrBoundaryPoint()
|| fit->vertex(1)->internalOrBoundaryPoint()
|| fit->vertex(2)->internalOrBoundaryPoint()
)
{
fit->faceIndex() = dualVerti;
dualPoints[dualVerti++] = toPoint2D(circumcenter(fit));
}
else
{
fit->faceIndex() = -1;
}
}
dualPoints.setSize(dualVerti);
// Create dual faces
// ~~~~~~~~~~~~~~~~~
dualFaces.setSize(number_of_vertices());
label dualFacei = 0;
labelList faceVerts(maxNvert);
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (vit->internalOrBoundaryPoint())
{
Face_circulator fcStart = incident_faces(vit);
Face_circulator fc = fcStart;
label verti = 0;
do
{
if (!is_infinite(fc))
{
if (fc->faceIndex() < 0)
{
FatalErrorIn
(
"Foam::CV2D::calcDual"
"(point2DField& dualPoints, faceList& dualFaces)"
)<< "Dual face uses vertex defined by a triangle"
" defined by an external point"
<< exit(FatalError);
}
// Look up the index of the triangle
faceVerts[verti++] = fc->faceIndex();
}
} while (++fc != fcStart);
if (faceVerts.size() > 2)
{
dualFaces[dualFacei++] =
face(labelList::subList(faceVerts, verti));
}
else
{
Info<< "From triangle point:" << vit->index()
<< " coord:" << toPoint2D(vit->point())
<< " generated illegal dualFace:" << faceVerts
<< endl;
}
}
}
dualFaces.setSize(dualFacei);
}
void Foam::CV2D::writePatch(const fileName& fName) const
{
point2DField dual2DPoints;
faceList dualFaces;
calcDual(dual2DPoints, dualFaces);
pointField dualPoints(dual2DPoints.size());
forAll(dualPoints, ip)
{
dualPoints[ip] = toPoint3D(dual2DPoints[ip]);
}
// Dump as primitive patch to be read by extrudeMesh.
OFstream str(fName);
Info<< "Writing patch to be used with extrudeMesh to file " << fName
<< endl;
str << dualPoints << nl << dualFaces << nl;
}
// ************************************************************************* //

116
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@ -1,116 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Application
CV2DMesher
Description
Conformal-Voronoi 2D automatic mesher with grid or read initial points
and point position relaxation with optional "squarification".
\*---------------------------------------------------------------------------*/
#include "CV2D.H"
#include "argList.H"
#include "IFstream.H"
using namespace Foam;
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Main program:
int main(int argc, char *argv[])
{
argList::noParallel();
argList::validArgs.clear();
argList::validArgs.append("surface");
argList::validOptions.insert("pointsFile", "<filename>");
argList args(argc, argv);
// Read control dictionary
// ~~~~~~~~~~~~~~~~~~~~~~~
dictionary controlDict(IFstream(args.executable() + "Dict")());
label nIterations(readLabel(controlDict.lookup("nIterations")));
// Read the surface to conform to
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
querySurface surf(args.args()[1]);
surf.writeTreeOBJ();
Info<< nl
<< "Read surface with " << surf.size() << " triangles from file "
<< args.args()[1] << nl << endl;
// Read and triangulation
// ~~~~~~~~~~~~~~~~~~~~~~
CV2D mesh(controlDict, surf);
if (args.options().found("pointsFile"))
{
fileName pointFileName(IStringStream(args.options()["pointsFile"])());
mesh.insertPoints(pointFileName);
mesh.insertSurfacePointPairs();
mesh.boundaryConform();
}
else
{
mesh.insertGrid();
mesh.insertSurfacePointPairs();
mesh.boundaryConform();
}
for (int iter=1; iter<=nIterations; iter++)
{
Info<< nl
<< "Relaxation iteration " << iter << nl
<< "~~~~~~~~~~~~~~~~~~~~~~~~" << endl;
scalar relax =
mesh.meshingControls().relaxationFactorStart
+
(
mesh.meshingControls().relaxationFactorEnd
- mesh.meshingControls().relaxationFactorStart
)
*scalar(iter)/scalar(nIterations);
mesh.newPoints(relax);
mesh.removeSurfacePointPairs();
mesh.insertSurfacePointPairs();
mesh.boundaryConform();
}
mesh.write();
Info<< nl << "End\n" << endl;
return 0;
}
// ************************************************************************* //

14
applications/utilities/mesh/generation/CV2DMesher/Make/files
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#include CGAL_FILES
querySurface.C
CV2D.C
controls.C
tolerances.C
insertFeaturePoints.C
insertSurfaceNearestPointPairs.C
insertSurfaceNearPointPairs.C
insertBoundaryConformPointPairs.C
CV2DIO.C
CV2DMesher.C
EXE = $(FOAM_APPBIN)/CV2DMesher

16
applications/utilities/mesh/generation/CV2DMesher/Make/options
View File

@ -1,16 +0,0 @@
EXE_DEBUG = -DFULLDEBUG -g -O0
//EXE_DEBUG =
include $(GENERAL_RULES)/CGAL
FFLAGS = -DCGAL_FILES='"${CGAL_PATH}/CGAL/files"'
EXE_INC = \
${EXE_DEBUG} \
${CGAL_INC} \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/triSurface/lnInclude
EXE_LIBS = \
-lmeshTools \
-ltriSurface

76
applications/utilities/mesh/generation/CV2DMesher/controls.C
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@ -1,76 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV2D.H"
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::CV2D::controls::controls(const dictionary& controlDict)
:
minCellSize(readScalar(controlDict.lookup("minCellSize"))),
minCellSize2(Foam::sqr(minCellSize)),
featAngle(readScalar(controlDict.lookup("featureAngle"))),
maxQuadAngle(readScalar(controlDict.lookup("maxQuadAngle"))),
squares(controlDict.lookup("squares")),
nearWallAlignedDist
(
readScalar(controlDict.lookup("nearWallAlignedDist"))*minCellSize
),
nearWallAlignedDist2(Foam::sqr(nearWallAlignedDist)),
relaxOrientation(controlDict.lookup("relaxOrientation")),
insertSurfaceNearestPointPairs
(
controlDict.lookup("insertSurfaceNearestPointPairs")
),
mirrorPoints(controlDict.lookup("mirrorPoints")),
insertSurfaceNearPointPairs
(
controlDict.lookup("insertSurfaceNearPointPairs")
),
writeInitialTriangulation(controlDict.lookup("writeInitialTriangulation")),
writeFeatureTriangulation(controlDict.lookup("writeFeatureTriangulation")),
writeNearestTriangulation(controlDict.lookup("writeNearestTriangulation")),
writeInsertedPointPairs(controlDict.lookup("writeInsertedPointPairs")),
writeFinalTriangulation(controlDict.lookup("writeFinalTriangulation")),
randomiseInitialGrid(controlDict.lookup("randomiseInitialGrid")),
randomPurturbation(readScalar(controlDict.lookup("randomPurturbation"))),
maxBoundaryConformingIter
(
readLabel(controlDict.lookup("maxBoundaryConformingIter"))
),
relaxationFactorStart
(
readScalar(controlDict.lookup("relaxationFactorStart"))
),
relaxationFactorEnd(readScalar(controlDict.lookup("relaxationFactorEnd")))
{}
// ************************************************************************* //

148
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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Class
indexedFace
Description
An indexed form of CGAL::Triangulation_face_base_2<K> used to keep
track of the vertices in the triangulation.
\*---------------------------------------------------------------------------*/
#ifndef indexedFace_H
#define indexedFace_H
#include <CGAL/Triangulation_2.h>
#include "indexedVertex.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace CGAL
{
/*---------------------------------------------------------------------------*\
Class indexedFace Declaration
\*---------------------------------------------------------------------------*/
template<class Gt, class Fb=CGAL::Triangulation_face_base_2<Gt> >
class indexedFace
:
public Fb
{
// Private data
//- The index for this triangle face
// -1: triangle and changed and associated data needs updating
// >=0: index of triangles, set by external update algorithm
int index_;
public:
enum faceTypes
{
UNCHANGED = 0,
CHANGED = -1,
SAVE_CHANGED = -2
};
typedef typename Fb::Vertex_handle Vertex_handle;
typedef typename Fb::Face_handle Face_handle;
template < typename TDS2 >
struct Rebind_TDS
{
typedef typename Fb::template Rebind_TDS<TDS2>::Other Fb2;
typedef indexedFace<Gt, Fb2> Other;
};
indexedFace()
:
Fb(),
index_(CHANGED)
{}
indexedFace(Vertex_handle v0, Vertex_handle v1, Vertex_handle v2)
:
Fb(v0, v1, v2),
index_(CHANGED)
{}
indexedFace
(
Vertex_handle v0,
Vertex_handle v1,
Vertex_handle v2,
Face_handle n0,
Face_handle n1,
Face_handle n2
)
:
Fb(v0, v1, v2, n0, n1, n2),
index_(CHANGED)
{}
void set_vertex(int i, Vertex_handle v)
{
index_ = CHANGED;
Fb::set_vertex(i, v);
}
void set_vertices()
{
index_ = CHANGED;
Fb::set_vertices();
}
void set_vertices(Vertex_handle v0, Vertex_handle v1, Vertex_handle v2)
{
index_ = CHANGED;
Fb::set_vertices(v0, v1, v2);
}
int& faceIndex()
{
return index_;
}
int faceIndex() const
{
return index_;
}
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace CGAL
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

261
applications/utilities/mesh/generation/CV2DMesher/indexedVertex.H
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@ -1,261 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Class
indexedVertex
Description
An indexed form of CGAL::Triangulation_vertex_base_2<K> used to keep
track of the vertices in the triangulation.
\*---------------------------------------------------------------------------*/
#ifndef indexedVertex_H
#define indexedVertex_H
#include <CGAL/Triangulation_2.h>
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace CGAL
{
/*---------------------------------------------------------------------------*\
Class indexedVertex Declaration
\*---------------------------------------------------------------------------*/
template<class Gt, class Vb=CGAL::Triangulation_vertex_base_2<Gt> >
class indexedVertex
:
public Vb
{
// Private data
//- The index for this triangle vertex
int index_;
//- Index of pair-point :
// NEAR_BOUNDARY_POINT : internal near boundary point.
// INTERNAL_POINT : internal point.
// FAR_POINT : far-point.
// >= 0 : part of point-pair. Index of other point.
// Lowest numbered is inside one (master).
int type_;
public:
enum pointTypes
{
NEAR_BOUNDARY_POINT = -4,
INTERNAL_POINT = -3,
MIRROR_POINT = -2,
FAR_POINT = -1
};
typedef typename Vb::Vertex_handle Vertex_handle;
typedef typename Vb::Face_handle Face_handle;
typedef typename Vb::Point Point;
template<typename TDS2>
struct Rebind_TDS
{
typedef typename Vb::template Rebind_TDS<TDS2>::Other Vb2;
typedef indexedVertex<Gt,Vb2> Other;
};
indexedVertex()
:
Vb(),
index_(INTERNAL_POINT),
type_(INTERNAL_POINT)
{}
indexedVertex(const Point& p)
:
Vb(p),
index_(INTERNAL_POINT),
type_(INTERNAL_POINT)
{}
indexedVertex(const Point& p, Face_handle f)
:
Vb(f, p),
index_(INTERNAL_POINT),
type_(INTERNAL_POINT)
{}
indexedVertex(Face_handle f)
:
Vb(f),
index_(INTERNAL_POINT),
type_(INTERNAL_POINT)
{}
int& index()
{
return index_;
}
int index() const
{
return index_;
}
int& type()
{
return type_;
}
int type() const
{
return type_;
}
//- Is point a far-point
inline bool farPoint() const
{
return type_ == FAR_POINT;
}
//- Is point internal, i.e. not on boundary
inline bool internalPoint() const
{
return type_ <= INTERNAL_POINT;
}
//- Is point internal and near the boundary
inline bool nearBoundary() const
{
return type_ == NEAR_BOUNDARY_POINT;
}
//- Set the point to be near the boundary
inline void setNearBoundary()
{
type_ = NEAR_BOUNDARY_POINT;
}
//- Is point a mirror point
inline bool mirrorPoint() const
{
return type_ == MIRROR_POINT;
}
//- Either master or slave of pointPair.
inline bool pairPoint() const
{
return type_ >= 0;
}
//- Master of a pointPair is the lowest numbered one.
inline bool ppMaster() const
{
if (type_ > index_)
{
return true;
}
else
{
return false;
}
}
//- Slave of a pointPair is the highest numbered one.
inline bool ppSlave() const
{
if (type_ >= 0 && type_ < index_)
{
return true;
}
else
{
return false;
}
}
//- Either original internal point or master of pointPair.
inline bool internalOrBoundaryPoint() const
{
return internalPoint() || ppMaster();
}
//- Is point near the boundary or part of the boundary definition
inline bool nearOrOnBoundary() const
{
return pairPoint() || mirrorPoint() || nearBoundary();
}
//- Do the two given vertices consitute a boundary point-pair
inline friend bool pointPair
(
const indexedVertex& v0,
const indexedVertex& v1
)
{
return v0.index_ == v1.type_ || v1.index_ == v0.type_;
}
//- Do the three given vertices consitute a boundary triangle
inline friend bool boundaryTriangle
(
const indexedVertex& v0,
const indexedVertex& v1,
const indexedVertex& v2
)
{
return (v0.pairPoint() && pointPair(v1, v2))
|| (v1.pairPoint() && pointPair(v2, v0))
|| (v2.pairPoint() && pointPair(v0, v1));
}
//- Do the three given vertices consitute an outside triangle
inline friend bool outsideTriangle
(
const indexedVertex& v0,
const indexedVertex& v1,
const indexedVertex& v2
)
{
return (v0.farPoint() || v0.ppSlave())
|| (v1.farPoint() || v1.ppSlave())
|| (v2.farPoint() || v2.ppSlave());
}
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace CGAL
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

290
applications/utilities/mesh/generation/CV2DMesher/insertBoundaryConformPointPairs.C
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@ -1,290 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV2D.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
void Foam::CV2D::insertPointPair
(
Triangulation::Finite_vertices_iterator& vit,
const point2D& p,
const label trii
)
{
if
(
!controls_.mirrorPoints
|| !insertMirrorPoint(toPoint2D(vit->point()), p)
)
{
insertPointPair
(
tols_.ppDist,
p,
toPoint2D(qSurf_.faceNormals()[trii])
);
}
vit = Triangulation::Finite_vertices_iterator
(
CGAL::Filter_iterator
<
Triangulation::All_vertices_iterator,
Triangulation::Infinite_tester
>(finite_vertices_end(), vit.predicate(), vit.base())
);
}
bool Foam::CV2D::insertPointPairAtIntersection
(
Triangulation::Finite_vertices_iterator& vit,
const point2D& defVert,
const point2D vertices[],
const scalar maxProtSize2
)
{
bool found = false;
point2D interPoint;
label interTri = -1;
scalar interDist2 = 0;
Face_circulator fcStart = incident_faces(vit);
Face_circulator fc = fcStart;
label vi = 0;
do
{
if (!is_infinite(fc))
{
pointIndexHit pHit = qSurf_.tree().findLine
(
toPoint3D(defVert),
toPoint3D(vertices[vi])
);
if (pHit.hit())
{
scalar dist2 =
magSqr(toPoint2D(pHit.hitPoint()) - vertices[vi]);
// Check the point is further away than the furthest so far
if (dist2 > interDist2)
{
scalar mps2 = maxProtSize2;
// If this is a boundary triangle reset the tolerance
// to avoid finding a hit point very close to a boundary
// vertex
if (boundaryTriangle(fc))
{
mps2 = tols_.maxNotchLen2;
}
if (dist2 > mps2)
{
found = true;
interPoint = toPoint2D(pHit.hitPoint());
interTri = pHit.index();
interDist2 = dist2;
}
}
}
vi++;
}
} while (++fc != fcStart);
if (found)
{
insertPointPair(vit, interPoint, interTri);
return true;
}
else
{
return false;
}
}
Foam::label Foam::CV2D::insertBoundaryConformPointPairs
(
const fileName& fName
)
{
label nIntersections = 0;
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
vit++
)
{
// Consider only those points part of point-pairs or near boundary
if (!vit->nearOrOnBoundary())
{
continue;
}
// Counter-clockwise circulator
Face_circulator fcStart = incident_faces(vit);
Face_circulator fc = fcStart;
bool infinite = false;
bool changed = false;
do
{
if (is_infinite(fc))
{
infinite = true;
break;
}
else if (fc->faceIndex() < Fb::UNCHANGED)
{
changed = true;
break;
}
} while (++fc != fcStart);
// If the dual-cell is connected to the infinite point or none of the
// faces whose circumcentres it uses have changed ignore
if (infinite || !changed) continue;
fc = fcStart;
label nVerts = 0;
do
{
vertices[nVerts++] = toPoint2D(circumcenter(fc));
if (nVerts == maxNvert)
{
break;
}
} while (++fc != fcStart);
// Check if dual-cell has a large number of faces in which case
// assumed to be in the far-field and reject
if (nVerts == maxNvert) continue;
// Set n+1 vertex to the first vertex for easy circulating
vertices[nVerts] = vertices[0];
// Convert triangle vertex to OpenFOAM point
point2DFromPoint defVert = toPoint2D(vit->point());
scalar maxProtSize2 = tols_.maxNotchLen2;
if (vit->internalOrBoundaryPoint())
{
// Calculate metrics of the dual-cell
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
// The perimeter of the dual-cell
scalar perimeter = 0;
// Twice the area of the dual-cell
scalar areaT2 = 0;
for (int vi=0; vi<nVerts; vi++)
{
vector2D edge(vertices[vi+1] - vertices[vi]);
perimeter += mag(edge);
vector2D otherEdge = defVert - vertices[vi];
areaT2 += mag(edge.x()*otherEdge.y() - edge.y()*otherEdge.x());
}
// If the dual-cell is very small reject refinement
if (areaT2 < tols_.minEdgeLen2) continue;
// Estimate the cell width
scalar cellWidth = areaT2/perimeter;
// Check dimensions of dual-cell
/*
// Quick rejection of dual-cell refinement based on it's perimeter
if (perimeter < 2*tols_.minCellSize) continue;
// Also check the area of the cell and reject refinement
// if it is less than that allowed
if (areaT2 < tols_.minCellSize2) continue;
// Estimate the cell width and reject refinement if it is less than
// that allowed
if (cellWidth < 0.5*tols_.minEdgeLen) continue;
*/
if
(
perimeter > 2*controls_.minCellSize
&& areaT2 > controls_.minCellSize2
&& cellWidth > 0.5*tols_.minEdgeLen
)
{
maxProtSize2 = 0.25*tols_.maxNotchLen2;
}
}
if (insertPointPairAtIntersection(vit, defVert, vertices, maxProtSize2))
{
nIntersections++;
}
}
return nIntersections;
}
void Foam::CV2D::markNearBoundaryPoints()
{
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
vit++
)
{
if (vit->internalPoint())
{
point vert(toPoint3D(vit->point()));
pointIndexHit pHit =
qSurf_.tree().findNearest(vert, 4*controls_.minCellSize2);
if (pHit.hit())
{
vit->setNearBoundary();
}
}
}
}
// ************************************************************************* //

162
applications/utilities/mesh/generation/CV2DMesher/insertFeaturePoints.C
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@ -1,162 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV2D.H"
#include "plane.H"
#include "triSurfaceTools.H"
#include "mathematicalConstants.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
// Create feature points/edges by creating a triplet in the corner.
// (this triplet will have as its circumcentre the feature)
void Foam::CV2D::insertFeaturePoints()
{
labelList featEdges(qSurf_.extractFeatures2D(controls_.featAngle));
const pointField& localPts = qSurf_.localPoints();
forAll(featEdges, i)
{
label edgeI = featEdges[i];
const edge& featEdge = qSurf_.edges()[edgeI];
// Get the feature point as the mid-point of the edge and convert to 2D
point2D featPt = toPoint2D(featEdge.centre(qSurf_.localPoints()));
// Pick up the two faces adjacent to the feature edge
const labelList& eFaces = qSurf_.edgeFaces()[edgeI];
label faceA = eFaces[0];
vector2D nA = toPoint2D(qSurf_.faceNormals()[faceA]);
label faceB = eFaces[1];
vector2D nB = toPoint2D(qSurf_.faceNormals()[faceB]);
// Intersect planes parallel to faceA and faceB offset by ppDist.
plane planeA(toPoint3D(featPt - tols_.ppDist*nA), toPoint3D(nA));
plane planeB(toPoint3D(featPt - tols_.ppDist*nB), toPoint3D(nB));
plane::ray interLine(planeA.planeIntersect(planeB));
// The reference point is where this line intersects the z_ plane
point2D refPt = toPoint2D
(
interLine.refPoint()
+ ((z_ - interLine.refPoint().z())/interLine.dir().z())
*interLine.dir()
);
point2D faceAVert = toPoint2D
(
localPts[triSurfaceTools::oppositeVertex(qSurf_, faceA, edgeI)]
);
// Determine convex or concave angle
if (((faceAVert - featPt) & nB) < 0)
{
// Convex. So refPt will be inside domain and hence a master point
// Insert the master point refering the the first slave
label masterPtIndex = insertPoint(refPt, number_of_vertices() + 1);
// Insert the slave points by reflecting refPt in both faces.
// with each slave refering to the master
point2D reflectedA = refPt + 2*((featPt - refPt) & nA)*nA;
insertPoint(reflectedA, masterPtIndex);
point2D reflectedB = refPt + 2*((featPt - refPt) & nB)*nB;
insertPoint(reflectedB, masterPtIndex);
}
else
{
// Concave. master and reflected points inside the domain.
// Generate reflected master to be outside.
point2D reflMasterPt = refPt + 2*(featPt - refPt);
// Reflect refPt in both faces.
point2D reflectedA =
reflMasterPt + 2*((featPt - reflMasterPt) & nA)*nA;
point2D reflectedB =
reflMasterPt + 2*((featPt - reflMasterPt) & nB)*nB;
// Total angle around the concave feature
// scalar totalAngle =
// 180*(2.0*mathematicalConstant::pi - acos(mag(nA & nB)))
// /mathematicalConstant::pi;
scalar totalAngle =
180*(mathematicalConstant::pi + acos(mag(nA & nB)))
/mathematicalConstant::pi;
// Number of quadrants the angle should be split into
int nQuads = int(totalAngle/controls_.maxQuadAngle) + 1;
// The number of additional master points needed to obtain the
// required number of quadrants.
int nAddPoints = min(max(nQuads - 2, 0), 2);
// index of reflMaster
label reflectedMaster = number_of_vertices() + 2 + nAddPoints;
// Master A is inside.
label reflectedAI = insertPoint(reflectedA, reflectedMaster);
// Master B is inside.
insertPoint(reflectedB, reflectedMaster);
if (nAddPoints == 1)
{
// One additinal point is the reflection of the slave point,
// i.e. the original reference point
insertPoint(refPt, reflectedMaster);
}
else if (nAddPoints == 2)
{
point2D reflectedAa = refPt - ((featPt - reflMasterPt) & nB)*nB;
insertPoint(reflectedAa, reflectedMaster);
point2D reflectedBb = refPt - ((featPt - reflMasterPt) & nA)*nA;
insertPoint(reflectedBb, reflectedMaster);
}
// Slave is outside.
insertPoint(reflMasterPt, reflectedAI);
}
}
if (controls_.writeFeatureTriangulation)
{
writePoints("feat_allPoints.obj", false);
writeFaces("feat_allFaces.obj", false);
writeFaces("feat_faces.obj", true);
writeTriangles("feat_triangles.obj", true);
}
}
// ************************************************************************* //

103
applications/utilities/mesh/generation/CV2DMesher/insertSurfaceNearPointPairs.C
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@ -1,103 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV2D.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
void Foam::CV2D::insertSurfaceNearPointPairs()
{
Info<< "insertSurfaceNearPointPairs: ";
label nNearPoints = 0;
for
(
Triangulation::Finite_edges_iterator eit = finite_edges_begin();
eit != finite_edges_end();
eit++
)
{
Vertex_handle v0h = eit->first->vertex(cw(eit->second));
Vertex_handle v1h = eit->first->vertex(ccw(eit->second));
if (v0h->ppMaster() && v1h->ppMaster())
{
point2DFromPoint v0(toPoint2D(v0h->point()));
point2DFromPoint v1(toPoint2D(v1h->point()));
// Check that the two triangle vertices are further apart than the
// minimum cell size
if (magSqr(v1 - v0) > controls_.minCellSize2)
{
point2D e0(toPoint2D(circumcenter(eit->first)));
point2D e1
(
toPoint2D(circumcenter(eit->first->neighbor(eit->second)))
);
// Calculate the length^2 of the edge normal to the surface
scalar edgeLen2 = magSqr(e0 - e1);
if (edgeLen2 < tols_.minNearPointDist2)
{
pointIndexHit pHit = qSurf_.tree().findNearest
(
toPoint3D(e0),
tols_.minEdgeLen2
);
if (pHit.hit())
{
insertPointPair
(
tols_.ppDist,
toPoint2D(pHit.hitPoint()),
toPoint2D(qSurf_.faceNormals()[pHit.index()])
);
nNearPoints++;
// Correct the edge iterator for the change in the
// number od edges following the point-pair insertion
eit = Finite_edges_iterator
(
finite_edges_end().base(),
eit.predicate(),
eit.base()
);
}
}
}
}
}
Info<< nNearPoints << " point-pairs inserted" << endl;
}
// ************************************************************************* //

223
applications/utilities/mesh/generation/CV2DMesher/insertSurfaceNearestPointPairs.C
View File

@ -1,223 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV2D.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
bool Foam::CV2D::dualCellSurfaceIntersection
(
const Triangulation::Finite_vertices_iterator& vit
) const
{
Triangulation::Edge_circulator ecStart = incident_edges(vit);
Triangulation::Edge_circulator ec = ecStart;
do
{
if (!is_infinite(ec))
{
point e0 = toPoint3D(circumcenter(ec->first));
// If edge end is outside bounding box then edge cuts boundary
if (!qSurf_.bb().contains(e0))
{
return true;
}
point e1 = toPoint3D(circumcenter(ec->first->neighbor(ec->second)));
// If other edge end is ouside bounding box then edge cuts boundary
if (!qSurf_.bb().contains(e1))
{
return true;
}
if (magSqr(e1 - e0) > tols_.minEdgeLen2)
{
pointIndexHit pHit = qSurf_.tree().findLineAny(e0, e1);
if (pHit.hit())
{
return true;
}
}
}
} while (++ec != ecStart);
return false;
}
void Foam::CV2D::insertPointPairs
(
const DynamicList<point2D>& nearSurfacePoints,
const DynamicList<point2D>& surfacePoints,
const DynamicList<label>& surfaceTris,
const fileName fName
)
{
if (controls_.mirrorPoints)
{
forAll(surfacePoints, ppi)
{
insertMirrorPoint
(
nearSurfacePoints[ppi],
surfacePoints[ppi]
);
}
}
else
{
forAll(surfacePoints, ppi)
{
insertPointPair
(
tols_.ppDist,
surfacePoints[ppi],
toPoint2D(qSurf_.faceNormals()[surfaceTris[ppi]])
);
}
}
Info<< surfacePoints.size() << " point-pairs inserted" << endl;
if (controls_.writeInsertedPointPairs)
{
OFstream str(fName);
label vertI = 0;
forAll(surfacePoints, ppi)
{
meshTools::writeOBJ(str, toPoint3D(surfacePoints[ppi]));
vertI++;
}
Info<< "insertPointPairs: Written " << surfacePoints.size()
<< " inserted point-pair locations to file "
<< str.name() << endl;
}
}
void Foam::CV2D::insertSurfaceNearestPointPairs()
{
Info<< "insertSurfaceNearestPointPairs: ";
label nSurfacePointsEst = min
(
number_of_vertices(),
size_t(10*sqrt(scalar(number_of_vertices())))
);
DynamicList<point2D> nearSurfacePoints(nSurfacePointsEst);
DynamicList<point2D> surfacePoints(nSurfacePointsEst);
DynamicList<label> surfaceTris(nSurfacePointsEst);
// Local references to surface mesh addressing
const pointField& localPoints = qSurf_.localPoints();
const labelListList& edgeFaces = qSurf_.edgeFaces();
const vectorField& faceNormals = qSurf_.faceNormals();
const labelListList& faceEdges = qSurf_.faceEdges();
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
vit++
)
{
if (vit->internalPoint())
{
point2DFromPoint vert(toPoint2D(vit->point()));
pointIndexHit pHit = qSurf_.tree().findNearest
(
toPoint3D(vert),
4*controls_.minCellSize2
);
if (pHit.hit())
{
vit->setNearBoundary();
// Reference to the nearest triangle
const labelledTri& f = qSurf_[pHit.index()];
// Find where point is on triangle.
// Note tolerance needed is relative one
// (used in comparing normalized [0..1] triangle coordinates).
label nearType, nearLabel;
triPointRef
(
localPoints[f[0]],
localPoints[f[1]],
localPoints[f[2]]
).classify(pHit.hitPoint(), 1e-6, nearType, nearLabel);
// If point is on a edge check if it is an internal feature
bool internalFeatureEdge = false;
if (nearType == triPointRef::EDGE)
{
label edgeI = faceEdges[pHit.index()][nearLabel];
const labelList& eFaces = edgeFaces[edgeI];
if
(
eFaces.size() == 2
&& (faceNormals[eFaces[0]] & faceNormals[eFaces[1]])
< -0.2
)
{
internalFeatureEdge = true;
}
}
if (!internalFeatureEdge && dualCellSurfaceIntersection(vit))
{
nearSurfacePoints.append(vert);
surfacePoints.append(toPoint2D(pHit.hitPoint()));
surfaceTris.append(pHit.index());
}
}
}
}
insertPointPairs
(
nearSurfacePoints,
surfacePoints,
surfaceTris,
"surfaceNearestIntersections.obj"
);
}
// ************************************************************************* //

229
applications/utilities/mesh/generation/CV2DMesher/querySurface.C
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@ -1,229 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "querySurface.H"
#include "mathematicalConstants.H"
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::querySurface::querySurface(const fileName& surfaceFileName)
:
triSurface(surfaceFileName),
rndGen_(12345),
bb_(localPoints()),
tree_
(
treeDataTriSurface(*this),
bb_.extend(rndGen_, 1e-3), // slightly randomize bb
8, // maxLevel
4, //10, // leafsize
10.0 //3.0 // duplicity
)
{}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::querySurface::~querySurface()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::labelList Foam::querySurface::extractFeatures2D
(
const scalar featAngle
) const
{
scalar featCos = cos(mathematicalConstant::pi*featAngle/180.0);
const labelListList& edgeFaces = this->edgeFaces();
const pointField& localPoints = this->localPoints();
const edgeList& edges = this->edges();
const vectorField& faceNormals = this->faceNormals();
DynamicList<label> featEdges(edges.size());
forAll(edgeFaces, edgeI)
{
const edge& e = edges[edgeI];
if (magSqr(e.vec(localPoints) & vector(1,1,0)) < SMALL)
{
const labelList& eFaces = edgeFaces[edgeI];
if
(
eFaces.size() == 2
&& (faceNormals[eFaces[0]] & faceNormals[eFaces[1]]) < featCos
)
{
featEdges.append(edgeI);
}
}
}
return featEdges.shrink();
}
Foam::indexedOctree<Foam::treeDataTriSurface>::volumeType
Foam::querySurface::insideOutside
(
const scalar searchSpan2,
const point& pt
) const
{
if (!bb_.contains(pt))
{
return indexedOctree<treeDataTriSurface>::OUTSIDE;
}
pointIndexHit pHit = tree_.findNearest(pt, searchSpan2);
if (!pHit.hit())
{
return tree_.getVolumeType(pt);
}
else
{
return indexedOctree<treeDataTriSurface>::MIXED;
}
}
// Check if point is inside surface
bool Foam::querySurface::inside(const point& pt) const
{
if (!bb_.contains(pt))
{
return false;
}
return
(
tree_.getVolumeType(pt) == indexedOctree<treeDataTriSurface>::INSIDE
);
}
// Check if point is outside surface
bool Foam::querySurface::outside(const point& pt) const
{
if (!bb_.contains(pt))
{
return true;
}
return
(
tree_.getVolumeType(pt) == indexedOctree<treeDataTriSurface>::OUTSIDE
);
}
// Check if point is inside surface by at least dist2
bool Foam::querySurface::wellInside(const point& pt, const scalar dist2) const
{
if (!bb_.contains(pt))
{
return false;
}
pointIndexHit pHit = tree_.findNearest(pt, dist2);
if (pHit.hit())
{
return false;
}
else
{
return
tree_.getVolumeType(pt)
== indexedOctree<treeDataTriSurface>::INSIDE;
}
}
// Check if point is outside surface by at least dist2
bool Foam::querySurface::wellOutside(const point& pt, const scalar dist2) const
{
if (!bb_.contains(pt))
{
return true;
}
pointIndexHit pHit = tree_.findNearest(pt, dist2);
if (pHit.hit())
{
return false;
}
else
{
return
tree_.getVolumeType(pt)
== indexedOctree<treeDataTriSurface>::OUTSIDE;
}
}
void Foam::querySurface::writeTreeOBJ() const
{
OFstream str("tree.obj");
label vertI = 0;
const List<indexedOctree<treeDataTriSurface>::node>& nodes = tree_.nodes();
forAll(nodes, nodeI)
{
const indexedOctree<treeDataTriSurface>::node& nod = nodes[nodeI];
const treeBoundBox& bb = nod.bb_;
const pointField points(bb.points());
label startVertI = vertI;
forAll(points, i)
{
meshTools::writeOBJ(str, points[i]);
vertI++;
}
const edgeList edges(treeBoundBox::edges);
forAll(edges, i)
{
const edge& e = edges[i];
str << "l " << e[0]+startVertI+1 << ' ' << e[1]+startVertI+1
<< nl;
}
}
}
// ************************************************************************* //

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@ -1,149 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Class
querySurface
Description
Searchable triSurface using an octree to speed-up queries.
SourceFiles
querySurface.C
\*---------------------------------------------------------------------------*/
#ifndef querySurface_H
#define querySurface_H
#include "triSurface.H"
#include "treeDataTriSurface.H"
#include "indexedOctree.H"
#include "Random.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class querySurface Declaration
\*---------------------------------------------------------------------------*/
class querySurface
:
public triSurface
{
// Private data
Random rndGen_;
// Bounding box of surface. Used for relative tolerances.
treeBoundBox bb_;
// Search engine on surface
indexedOctree<treeDataTriSurface> tree_;
// Private Member Functions
//- Disallow default bitwise copy construct
querySurface(const querySurface&);
//- Disallow default bitwise assignment
void operator=(const querySurface&);
public:
// Constructors
//- Construct given file name of the surface
querySurface(const fileName& surfaceFileName);
// Destructor
~querySurface();
// Member Functions
// Access
const treeBoundBox& bb() const
{
return bb_;
}
const indexedOctree<treeDataTriSurface>& tree() const
{
return tree_;
}
// Query
//- Extract feature edges/points(2D)
// using the given feature angle in deg
labelList extractFeatures2D(const scalar featAngle) const;
//- Returns inside, outside or mixed (= close to surface)
indexedOctree<Foam::treeDataTriSurface>::volumeType insideOutside
(
const scalar searchSpan2,
const point& pt
) const;
//- Check if point is inside surface
bool inside(const point& pt) const;
//- Check if point is outside surface
bool outside(const point& pt) const;
//- Check if point is inside surface by at least dist2
bool wellInside(const point& pt, const scalar dist2) const;
//- Check if point is outside surface by at least dist2
bool wellOutside(const point& pt, const scalar dist2) const;
// Write
void writeTreeOBJ() const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
//#include "querySurfaceI.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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applications/utilities/mesh/generation/CV2DMesher/testCase/.gmtcommands4
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# GMT common arguments shelf
-Jx10
-jx10
-R-0.7/0.3/-1.73218e-19/1
EOF
F

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: 1.4.2 |
| \\ / A nd | Web: http://www.openfoam.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class polyBoundaryMesh;
object boundary;
location "0/polyMesh";
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
3
(
sides
{
type wall;
nFaces 387;
startFace 4274;
}
originalPatch
{
type patch;
nFaces 1537;
startFace 4661;
}
otherSide
{
type patch;
nFaces 1537;
startFace 6198;
}
)
// ************************************************************************* //

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: 1.4.2 |
| \\ / A nd | Web: http://www.openfoam.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class regIOobject;
object cellZones;
location "0/polyMesh";
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
0
()
// ************************************************************************* //

21
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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: 1.4.2 |
| \\ / A nd | Web: http://www.openfoam.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class regIOobject;
object faceZones;
location "0/polyMesh";
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
0
()
// ************************************************************************* //

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/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: 1.4.2 |
| \\ / A nd | Web: http://www.openfoam.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class regIOobject;
object pointZones;
location "0/polyMesh";
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
0
()
// ************************************************************************* //

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// Min cell size used in tolerances when inserting points for
// boundary conforming.
// Also used to as the grid spacing usind in insertGrid.
minCellSize 0.05;
// Feature angle used to inser feature points
// 0 = all features, 180 = no features
featureAngle 45;
// Maximum quadrant angle allowed at a concave corner before
// additional "mitering" lines are added
maxQuadAngle 110;
// Should the mesh be square-dominated or of unbiased hexagons
squares yes;
// Near-wall region where cells are aligned with the wall specified as a number
// of cell layers
nearWallAlignedDist 3;
// Chose if the cell orientation should relax during the iterations
// or remain fixed to the x-y directions
relaxOrientation yes;
// Insert near-boundary point mirror or point-pairs
insertSurfaceNearestPointPairs yes;
// Mirror near-boundary points rather than insert point-pairs
mirrorPoints no;
// Insert point-pairs vor dual-cell vertices very near the surface
insertSurfaceNearPointPairs yes;
// Choose if to randomise the initial grid created by insertGrid.
randomiseInitialGrid yes;
// Perturbation fraction, 1 = cell-size.
randomPurturbation 0.1;
// Number of relaxation iterations.
nIterations 1000;
// Relaxation factor at the start of the iteration sequence.
// 0.5 is a sensible maximum and < 0.2 converges better.
relaxationFactorStart 1.0;
// Relaxation factor at the end of the iteration sequence.
// Should be <= relaxationFactorStart
relaxationFactorEnd 0;
writeInitialTriangulation no;
writeFeatureTriangulation yes;
writeNearestTriangulation no;
writeInsertedPointPairs no;
writeFinalTriangulation yes;
// Maximum number of iterations used in boundaryConform.
maxBoundaryConformingIter 5;
minEdgeLenCoeff 0.5;
maxNotchLenCoeff 0.3;
minNearPointDistCoeff 0.25;
ppDistCoeff 0.05;

3
applications/utilities/mesh/generation/CV2DMesher/testCase/README
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CV2DMesher stls/shapeForHenry4.stl
extrudeMesh .. testCase 1 0.01 -surface patch.pch

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%!PS-Adobe-3.0 EPSF-3.0
%%Title: Object_44
%%Date: Mon Mar 24 13:56:18 GMT 2008
%%Creator: JavaView v.2.42 PostScript Export
%%JavaView is Copyright 1999-2002, http://www.javaview.de/
%%by Konrad Polthier, Samy Khadem, Eike Preuss, Ulrich Reitebuch
%%PostScript filter based on: PSGr Java PostScript Context
%%PSGr is (C) 1996 Ernest Friedman-Hill and Sandia National Labs
%%BoundingBox: 10 10 602 483
%%EndComments
%%BeginProlog
10 10 translate
%%Modify scaling when including in TeX:
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applications/utilities/mesh/generation/CV2DMesher/testCase/constant/gmtDicts/mesh
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{
version 1.4.2;
format ascii;
root "..";
case "testCase2";
instance "constant";
local "";
class dictionary;
object gmtDict;
}
// How to plot
projection "x10";
overlayMesh true;
projection2D XY;
patch originalPatch;

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endsolid /users/vis/dru/cube.tri

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applications/utilities/mesh/generation/CV2DMesher/testCase/stls/unit_cube2.stl
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solid cube.tri
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endsolid cube.tri

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applications/utilities/mesh/generation/CV2DMesher/testCase/stls/unit_cube3.stl
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solid cube.tri
facet normal 0.393919 0.919145 0
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endsolid cube.tri

64
applications/utilities/mesh/generation/CV2DMesher/testCase/system/controlDict
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// The FOAM Project // File: controlDict
/*
-------------------------------------------------------------------------------
========= | dictionary
\\ / |
\\ / | Name: controlDict
\\ / | Family: FoamX configuration file
\\/ |
F ield | FOAM version: 2.3
O peration | Product of Nabla Ltd.
A and |
M anipulation | Email: Enquiries@Nabla.co.uk
-------------------------------------------------------------------------------
*/
// FoamX Case Dictionary.
FoamFile
{
version 2.0;
format ascii;
root "/home/storm/chris/foam/chris2.3/run/tutorials/icoFoam";
case "cavity";
instance "system";
local "";
class dictionary;
object controlDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
applicationClass icoFoam;
startFrom latestTime;
startTime 0;
stopAt endTime;
endTime 0.5;
deltaT 0.005;
writeControl timeStep;
writeInterval 20;
cycleWrite 0;
writeFormat ascii;
writePrecision 6;
writeCompression uncompressed;
timeFormat general;
timePrecision 6;
runTimeModifiable yes;
// ************************************************************************* //

72
applications/utilities/mesh/generation/CV2DMesher/testCase/system/fvSchemes
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@ -1,72 +0,0 @@
// The FOAM Project // File: fvSchemes
/*
-------------------------------------------------------------------------------
========= | dictionary
\\ / |
\\ / | Name: fvSchemes
\\ / | Family: FoamX configuration file
\\/ |
F ield | FOAM version: 2.3
O peration | Product of Nabla Ltd.
A and |
M anipulation | Email: Enquiries@Nabla.co.uk
-------------------------------------------------------------------------------
*/
// FoamX Case Dictionary.
FoamFile
{
version 2.0;
format ascii;
root "/home/storm/chris/foam/chris2.3/run/tutorials/icoFoam";
case "cavity";
instance "system";
local "";
class dictionary;
object fvSchemes;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
timeScheme EulerImplicit;
gradSchemes
{
default Gauss linear;
grad(p) Gauss linear;
}
divSchemes
{
default none;
div(phi,U) Gauss linear;
}
laplacianSchemes
{
default none;
laplacian(nu,U) Gauss linear corrected;
laplacian(1|A(U),p) Gauss linear corrected;
}
interpolationSchemes
{
default linear;
interpolate(HbyA) linear;
}
snGradSchemes
{
default corrected;
}
fluxRequired
{
default no;
p;
}
// ************************************************************************* //

46
applications/utilities/mesh/generation/CV2DMesher/testCase/system/fvSolution
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// The FOAM Project // File: fvSolution
/*
-------------------------------------------------------------------------------
========= | dictionary
\\ / |
\\ / | Name: fvSolution
\\ / | Family: FoamX configuration file
\\/ |
F ield | FOAM version: 2.3
O peration | Product of Nabla Ltd.
A and |
M anipulation | Email: Enquiries@Nabla.co.uk
-------------------------------------------------------------------------------
*/
// FoamX Case Dictionary.
FoamFile
{
version 2.0;
format ascii;
root "/home/storm/chris/foam/chris2.3/run/tutorials/icoFoam";
case "cavity";
instance "system";
local "";
class dictionary;
object fvSolution;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
solvers
{
p ICCG 1e-06 0;
U BICCG 1e-05 0;
}
PISO
{
nCorrectors 2;
nNonOrthogonalCorrectors 0;
}
// ************************************************************************* //

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applications/utilities/mesh/generation/CV2DMesher/testCase/triangles.obj
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62
applications/utilities/mesh/generation/CV2DMesher/tolerances.C
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@ -1,62 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV2D.H"
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::CV2D::tolerances::tolerances
(
const dictionary& controlDict,
const scalar minCellSize,
const boundBox& bb
)
:
span
(
max(mag(bb.max().x()), mag(bb.min().x()))
+ max(mag(bb.max().y()), mag(bb.min().y()))
),
span2(Foam::sqr(span)),
minEdgeLen(readScalar(controlDict.lookup("minEdgeLenCoeff"))*minCellSize),
minEdgeLen2(Foam::sqr(minEdgeLen)),
maxNotchLen(readScalar(controlDict.lookup("maxNotchLenCoeff"))*minCellSize),
maxNotchLen2(Foam::sqr(maxNotchLen)),
minNearPointDist
(
readScalar(controlDict.lookup("minNearPointDistCoeff"))*minCellSize
),
minNearPointDist2(Foam::sqr(minNearPointDist)),
ppDist(readScalar(controlDict.lookup("ppDistCoeff"))*minCellSize),
ppDist2(Foam::sqr(ppDist))
{}
// ************************************************************************* //

84
applications/utilities/mesh/generation/CV3DMesher/CGALTriangulation3Ddefs.H
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@ -1,84 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Typedefs
CGALTriangulation3Ddefs
Description
CGAL data structures used for 3D Delaunay meshing.
Define CGAL_INEXACT to use Exact_predicates_inexact_constructions kernel
otherwise the more robust but much less efficient
Exact_predicates_exact_constructions will be used.
Define CGAL_HIERARCHY to use hierarchical Delaunay triangulation which is
faster but uses more memory than the standard Delaunay triangulation.
\*---------------------------------------------------------------------------*/
#ifndef CGALTriangulation3Ddefs_H
#define CGALTriangulation3Ddefs_H
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#include "CGAL/Delaunay_triangulation_3.h"
#include "indexedVertex.H"
#include "indexedCell.H"
#ifdef CGAL_INEXACT
// Fast kernel using a double as the storage type but the triangulation
// may fail
#include "CGAL/Exact_predicates_inexact_constructions_kernel.h"
typedef CGAL::Exact_predicates_inexact_constructions_kernel K;
#else
// Very robust but expensive kernel
#include "CGAL/Exact_predicates_exact_constructions_kernel.h"
typedef CGAL::Exact_predicates_exact_constructions_kernel K;
#endif
typedef CGAL::indexedVertex<K> Vb;
typedef CGAL::indexedCell<K> Cb;
#ifdef CGAL_HIERARCHY
// Data structures for hierarchical Delaunay triangulation which is more
// efficient but also uses more storage
#include "CGAL/Triangulation_hierarchy_3.h"
typedef CGAL::Triangulation_hierarchy_vertex_base_3<Vb> Vbh;
typedef CGAL::Triangulation_data_structure_3<Vbh, Cb> Tds;
typedef CGAL::Delaunay_triangulation_3<K, Tds> Triangulation;
typedef CGAL::Triangulation_hierarchy_3<Triangulation> HTriangulation;
#else
// Data structures for standard Delaunay triangulation
typedef CGAL::Triangulation_data_structure_3<Vb, Cb> Tds;
typedef CGAL::Delaunay_triangulation_3<K, Tds> Triangulation;
typedef Triangulation HTriangulation;
#endif
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

269
applications/utilities/mesh/generation/CV3DMesher/CV3D.C
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@ -1,269 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*---------------------------------------------------------------------------*/
#include "CV3D.H"
#include "Random.H"
#include "IFstream.H"
#include "uint.H"
#include "ulong.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
void Foam::CV3D::insertBoundingBox()
{
Info<< "insertBoundingBox: creating bounding mesh" << nl << endl;
scalar bigSpan = 10*tols_.span;
insertPoint(point(-bigSpan, -bigSpan, -bigSpan), Vb::FAR_POINT);
insertPoint(point(-bigSpan, -bigSpan, bigSpan), Vb::FAR_POINT);
insertPoint(point(-bigSpan, bigSpan, -bigSpan), Vb::FAR_POINT);
insertPoint(point(-bigSpan, bigSpan, bigSpan), Vb::FAR_POINT);
insertPoint(point( bigSpan, -bigSpan, -bigSpan), Vb::FAR_POINT);
insertPoint(point( bigSpan, -bigSpan, bigSpan), Vb::FAR_POINT);
insertPoint(point( bigSpan, bigSpan, -bigSpan), Vb::FAR_POINT);
insertPoint(point( bigSpan, bigSpan , bigSpan), Vb::FAR_POINT);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::CV3D::CV3D
(
const dictionary& controlDict,
const querySurface& qSurf
)
:
HTriangulation(),
qSurf_(qSurf),
controls_(controlDict),
tols_(controlDict, controls_.minCellSize, qSurf.bb()),
startOfInternalPoints_(0),
startOfSurfacePointPairs_(0)
{
// insertBoundingBox();
insertFeaturePoints();
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::CV3D::~CV3D()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
void Foam::CV3D::insertPoints
(
const pointField& points,
const scalar nearness
)
{
Info<< "insertInitialPoints(const pointField& points): ";
startOfInternalPoints_ = number_of_vertices();
label nVert = startOfInternalPoints_;
// Add the points and index them
forAll(points, i)
{
const point& p = points[i];
if (qSurf_.wellInside(p, nearness))
{
insert(toPoint(p))->index() = nVert++;
}
else
{
Warning
<< "Rejecting point " << p << " outside surface" << endl;
}
}
Info<< nVert << " vertices inserted" << endl;
if (controls_.writeInitialTriangulation)
{
// Checking validity of triangulation
assert(is_valid());
writeTriangles("initial_triangles.obj", true);
// writeFaces("initial_faces.obj", true);
}
}
void Foam::CV3D::insertPoints(const fileName& pointFileName)
{
IFstream pointsFile(pointFileName);
if (pointsFile.good())
{
insertPoints(pointField(pointsFile), 0.5*controls_.minCellSize2);
}
else
{
FatalErrorIn("insertInitialPoints")
<< "Could not open pointsFile " << pointFileName
<< exit(FatalError);
}
}
void Foam::CV3D::insertGrid()
{
Info<< "insertInitialGrid: ";
startOfInternalPoints_ = number_of_vertices();
label nVert = startOfInternalPoints_;
scalar x0 = qSurf_.bb().min().x();
scalar xR = qSurf_.bb().max().x() - x0;
int ni = int(xR/controls_.minCellSize) + 1;
scalar y0 = qSurf_.bb().min().y();
scalar yR = qSurf_.bb().max().y() - y0;
int nj = int(yR/controls_.minCellSize) + 1;
scalar z0 = qSurf_.bb().min().z();
scalar zR = qSurf_.bb().max().z() - z0;
int nk = int(zR/controls_.minCellSize) + 1;
vector delta(xR/ni, yR/nj, zR/nk);
delta *= pow((1.0/2.0),-(1.0/3.0));
Random rndGen(1321);
scalar pert = controls_.randomPerturbation*cmptMin(delta);
for (int i=0; i<ni; i++)
{
for (int j=0; j<nj; j++)
{
for (int k=0; k<nk; k++)
{
point p1 (x0 + i*delta.x(), y0 + j*delta.y(), z0 + k*delta.z());
point p2 = p1 + 0.5*delta;
if (controls_.randomiseInitialGrid)
{
p1.x() += pert*(rndGen.scalar01() - 0.5);
p1.y() += pert*(rndGen.scalar01() - 0.5);
p1.z() += pert*(rndGen.scalar01() - 0.5);
}
if (qSurf_.wellInside(p1, 0.5*controls_.minCellSize2))
{
insert(Point(p1.x(), p1.y(), p1.z()))->index() = nVert++;
}
if (controls_.randomiseInitialGrid)
{
p2.x() += pert*(rndGen.scalar01() - 0.5);
p2.y() += pert*(rndGen.scalar01() - 0.5);
p2.z() += pert*(rndGen.scalar01() - 0.5);
}
if (qSurf_.wellInside(p2, 0.5*controls_.minCellSize2))
{
insert(Point(p2.x(), p2.y(), p2.z()))->index() = nVert++;
}
}
}
}
Info<< nVert << " vertices inserted" << nl << endl;
if (controls_.writeInitialTriangulation)
{
// Checking validity of triangulation
assert(is_valid());
writePoints("initial_points.obj", true);
writeTriangles("initial_triangles.obj", true);
// writeFaces("initial_faces.obj", true);
}
}
void Foam::CV3D::insertSurfacePointPairs()
{
startOfSurfacePointPairs_ = number_of_vertices();
if (controls_.insertSurfaceNearestPointPairs)
{
insertSurfaceNearestPointPairs();
}
if (controls_.writeNearestTriangulation)
{
// writeFaces("near_allFaces.obj", false);
// writeFaces("near_faces.obj", true);
writeTriangles("near_triangles.obj", true);
}
if (controls_.insertSurfaceNearPointPairs)
{
insertSurfaceNearPointPairs();
}
startOfBoundaryConformPointPairs_ = number_of_vertices();
}
void Foam::CV3D::boundaryConform()
{
}
void Foam::CV3D::removeSurfacePointPairs()
{
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (vit->index() >= startOfSurfacePointPairs_)
{
remove(vit);
}
}
}
void Foam::CV3D::write() const
{
if (controls_.writeFinalTriangulation)
{
writePoints("allPoints.obj", false);
writePoints("points.obj", true);
// writeFaces("allFaces.obj", false);
// writeFaces("faces.obj", true);
writeTriangles("allTriangles.obj", false);
writeTriangles("triangles.obj", true);
// writeMesh();
}
}
// ************************************************************************* //

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@ -1,354 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Class
CV3D
Description
SourceFiles
CV3DI.H
CV3D.C
CV3DIO.C
controls.C
tolerances.C
insertFeaturePoints.C
insertSurfaceNearestPointPairs.C
insertSurfaceNearPointPairs.C
insertBoundaryConformPointPairs.C
\*---------------------------------------------------------------------------*/
#ifndef CV3D_H
#define CV3D_H
#define CGAL_INEXACT
#define CGAL_HIERARCHY
#include "CGALTriangulation3Ddefs.H"
#include "querySurface.H"
#include "dictionary.H"
#include "DynamicList.H"
#include "Switch.H"
#include "Time.H"
#include "polyMesh.H"
#include "SortableList.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class CV3D Declaration
\*---------------------------------------------------------------------------*/
class CV3D
:
public HTriangulation
{
public:
class controls
{
public:
//- Minimum cell size below which protusions through the surface are
// not split
scalar minCellSize;
//- Square of minCellSize
scalar minCellSize2;
//- The feature angle used to select corners to be
// explicitly represented in the mesh.
// 0 = all features, 180 = no features
scalar featAngle;
//- Maximum quadrant angle allowed at a concave corner before
// additional "mitering" lines are added
scalar maxQuadAngle;
//- Insert near-boundary point mirror or point-pairs
Switch insertSurfaceNearestPointPairs;
//- Mirror near-boundary points rather than insert point-pairs
Switch mirrorPoints;
//- Insert point-pairs for dual-cell vertices very near the surface
Switch insertSurfaceNearPointPairs;
Switch writeInitialTriangulation;
Switch writeFeatureTriangulation;
Switch writeNearestTriangulation;
Switch writeInsertedPointPairs;
Switch writeFinalTriangulation;
Switch randomiseInitialGrid;
scalar randomPerturbation;
controls(const dictionary& controlDict);
};
class tolerances
{
public:
//- Maximum cartesian span of the geometry
scalar span;
//- Square of span
scalar span2;
//- Minumum edge-length of the cell size below which protusions
// through the surface are not split
scalar minEdgeLen;
//- Square of minEdgeLen
scalar minEdgeLen2;
//- Distance between boundary conforming point-pairs
scalar ppDist;
//- Square of ppDist
scalar ppDist2;
tolerances
(
const dictionary& controlDict,
scalar minCellSize,
const boundBox&
);
};
private:
// Private data
//- The surface to mesh
const querySurface& qSurf_;
//- Meshing controls
controls controls_;
//- Meshing tolerances
tolerances tols_;
//- Keep track of the start of the internal points
label startOfInternalPoints_;
//- Keep track of the start of the surface point-pairs
label startOfSurfacePointPairs_;
//- Keep track of the boundary conform point-pairs
// stored after the insertion of the surface point-pairs in case
// the boundary conform function is called more than once without
// removing and insertin the surface point-pairs
label startOfBoundaryConformPointPairs_;
// Private Member Functions
//- Disallow default bitwise copy construct
CV3D(const CV3D&);
//- Disallow default bitwise assignment
void operator=(const CV3D&);
//- Insert point and return it's index
inline label insertPoint
(
const point& pt,
const label type
);
inline bool insertMirrorPoint
(
const point& nearSurfPt,
const point& surfPt
);
//- Insert a point-pair at a distance ppDist either side of
// surface point point surfPt in the direction n
inline void insertPointPair
(
const scalar mirrorDist,
const point& surfPt,
const vector& n
);
//- Create the initial mesh from the bounding-box
void insertBoundingBox();
//- Insert point groups at the feature points.
void insertFeaturePoints();
//- Insert point-pairs at the given set of points using the surface
// normals corresponding to the given set of surface triangles
// and write the inserted point locations to the given file.
void insertPointPairs
(
const DynamicList<point>& nearSurfacePoints,
const DynamicList<point>& surfacePoints,
const DynamicList<label>& surfaceTris,
const fileName fName
);
//- Check to see if dual cell specified by given vertex iterator
// intersects the boundary and hence reqires a point-pair.
bool dualCellSurfaceIntersection
(
const Triangulation::Finite_vertices_iterator& vit
) const;
//- Insert point-pairs at the nearest points on the surface to the
// control vertex of dual-cells which intersect the boundary in order
// to provide a boundary-layer mesh.
// NB: This is not guaranteed to close the boundary
void insertSurfaceNearestPointPairs();
//- Insert point-pairs at small dual-cell edges on the surface in order
// to improve the boundary-layer mesh generated by
// insertSurfaceNearestPointPairs.
void insertSurfaceNearPointPairs();
void markNearBoundaryPoints();
//- Dual calculation
void calcDualMesh
(
pointField& points,
faceList& faces,
labelList& owner,
labelList& neighbour,
wordList& patchNames,
labelList& patchSizes,
labelList& patchStarts
);
public:
// Constructors
//- Construct for given surface
CV3D(const dictionary& controlDict, const querySurface& qSurf);
// Destructor
~CV3D();
// Member Functions
// Access
const controls& meshingControls() const
{
return controls_;
}
// Conversion functions between point and Point
# ifdef CGAL_INEXACT
typedef const point& pointFromPoint;
typedef const Point& PointFrompoint;
# else
typedef point pointFromPoint;
typedef Point PointFrompoint;
# endif
inline pointFromPoint topoint(const Point&) const;
inline PointFrompoint toPoint(const point&) const;
// Point insertion
//- Create the initial mesh from the given internal points.
// Points must be inside the boundary by at least nearness
// otherwise they are ignored.
void insertPoints
(
const pointField& points,
const scalar nearness
);
//- Create the initial mesh from the internal points in the given
// file. Points outside the geometry are ignored.
void insertPoints(const fileName& pointFileName);
//- Create the initial mesh as a BCC lattice of points.
// Points outside the geometry are ignored.
void insertGrid();
//- Insert all surface point-pairs from
// insertSurfaceNearestPointPairs and
// findIntersectionForOutsideCentroid
void insertSurfacePointPairs();
//- Insert point-pairs where there are protrusions into
// or out of the surface
void boundaryConform();
// Point removal
//- Remove the point-pairs introduced by insertSurfacePointPairs
// and boundaryConform
void removeSurfacePointPairs();
// Check
// Edit
// Write
//- Write Delaunay points to .obj file
void writePoints(const fileName& fName, bool internalOnly) const;
//- Write Delaunay triangles as .obj file
void writeTriangles(const fileName& fName, bool internalOnly) const;
//- Write dual points and faces as .obj file
void writeDual(const fileName& fName) const;
//- Write polyMesh
void writeMesh(const Time& runTime);
void write() const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#include "CV3DI.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*---------------------------------------------------------------------------*/
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
inline Foam::label Foam::CV3D::insertPoint
(
const point& p,
const label type
)
{
uint nVert = number_of_vertices();
Vertex_handle vh = insert(toPoint(p));
if (nVert == number_of_vertices())
{
WarningIn("Foam::CV3D::insertPoint")
<< "Failed to insert point " << p << endl;
}
else
{
vh->index() = nVert;
vh->type() = type;
}
return vh->index();
}
inline bool Foam::CV3D::insertMirrorPoint
(
const point& nearSurfPt,
const point& surfPt
)
{
point mirrorPoint(2*surfPt - nearSurfPt);
if (qSurf_.outside(mirrorPoint))
{
insertPoint(mirrorPoint, Vb::MIRROR_POINT);
return true;
}
else
{
return false;
}
}
inline void Foam::CV3D::insertPointPair
(
const scalar ppDist,
const point& surfPt,
const vector& n
)
{
vector ppDistn = ppDist*n;
label master = insertPoint
(
surfPt - ppDistn,
number_of_vertices() + 1
);
insertPoint(surfPt + ppDistn, master);
}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
#ifdef CGAL_INEXACT
inline Foam::CV3D::pointFromPoint Foam::CV3D::topoint
(
const Point& P
) const
{
return reinterpret_cast<pointFromPoint>(P);
}
inline Foam::CV3D::PointFrompoint Foam::CV3D::toPoint
(
const point& p
) const
{
return reinterpret_cast<PointFrompoint>(p);
}
#else
inline Foam::CV3D::pointFromPoint Foam::CV3D::topoint
(
const Point& P
) const
{
return point
(
CGAL::to_double(P.x()),
CGAL::to_double(P.y()),
CGAL::to_double(P.z())
);
}
inline Foam::CV3D::PointFrompoint Foam::CV3D::toPoint
(
const point& p
) const
{
return Point(p.x(), p.y(), p.z());
}
#endif
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// ************************************************************************* //

257
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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*---------------------------------------------------------------------------*/
#include "CV3D.H"
#include "IOstreams.H"
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
void Foam::CV3D::writePoints(const fileName& fName, bool internalOnly) const
{
Info << "Writing points to " << fName << nl << endl;
OFstream str(fName);
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (!internalOnly || vit->internalOrBoundaryPoint())
{
meshTools::writeOBJ(str, topoint(vit->point()));
}
}
}
void Foam::CV3D::writeDual(const fileName& fName) const
{
Info << "Writing dual points and faces to " << fName << nl << endl;
OFstream str(fName);
label dualVerti = 0;
for
(
Triangulation::Finite_cells_iterator cit = finite_cells_begin();
cit != finite_cells_end();
++cit
)
{
if
(
cit->vertex(0)->internalOrBoundaryPoint()
|| cit->vertex(1)->internalOrBoundaryPoint()
|| cit->vertex(2)->internalOrBoundaryPoint()
|| cit->vertex(3)->internalOrBoundaryPoint()
)
{
cit->cellIndex() = dualVerti;
meshTools::writeOBJ(str, topoint(dual(cit)));
dualVerti++;
}
else
{
cit->cellIndex() = -1;
}
}
for
(
Triangulation::Finite_edges_iterator eit = finite_edges_begin();
eit != finite_edges_end();
++eit
)
{
if
(
eit->first->vertex(eit->second)->internalOrBoundaryPoint()
|| eit->first->vertex(eit->third)->internalOrBoundaryPoint()
)
{
Cell_circulator ccStart = incident_cells(*eit);
Cell_circulator cc = ccStart;
str<< 'f';
do
{
if (!is_infinite(cc))
{
if (cc->cellIndex() < 0)
{
FatalErrorIn
(
"Foam::CV3D::writeDual(const fileName& fName)"
)<< "Dual face uses circumcenter defined by a Delaunay"
" tetrahedron with no internal or boundary points."
<< exit(FatalError);
}
str<< ' ' << cc->cellIndex() + 1;
}
} while (++cc != ccStart);
str<< nl;
}
}
}
void Foam::CV3D::writeTriangles(const fileName& fName, bool internalOnly) const
{
Info << "Writing triangles to " << fName << nl << endl;
OFstream str(fName);
labelList vertexMap(number_of_vertices());
label verti = 0;
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (!internalOnly || !vit->farPoint())
{
vertexMap[vit->index()] = verti++;
meshTools::writeOBJ(str, topoint(vit->point()));
}
}
for
(
Triangulation::Finite_facets_iterator fit = finite_facets_begin();
fit != finite_facets_end();
++fit
)
{
const Cell_handle& c(fit->first);
const int& oppositeVertex(fit->second);
List<label> facetIndices(3,-1);
bool writeFacet = true;
for(label i = 0, k = 0;i < 4; i++)
{
if(i != oppositeVertex)
{
if(!internalOnly || !c->vertex(i)->farPoint())
{
facetIndices[k] = i;
k++;
}
else
{
writeFacet = false;
}
}
}
if(writeFacet)
{
str << "f "
<< vertexMap[c->vertex(facetIndices[0])->index()] + 1
<< ' ' << vertexMap[c->vertex(facetIndices[1])->index()] + 1
<< ' ' << vertexMap[c->vertex(facetIndices[2])->index()] + 1
<< nl;
}
}
}
void Foam::CV3D::writeMesh(const Time& runTime)
{
Info<< nl << "Writing polyMesh." << endl;
pointField points(0);
faceList faces(0);
labelList owner(0);
labelList neighbour(0);
wordList patchNames(0);
labelList patchSizes(0);
labelList patchStarts(0);
calcDualMesh
(
points,
faces,
owner,
neighbour,
patchNames,
patchSizes,
patchStarts
);
IOobject io
(
Foam::polyMesh::defaultRegion,
runTime.constant(),
runTime,
IOobject::NO_READ,
IOobject::AUTO_WRITE
);
polyMesh pMesh
(
io,
points,
faces,
owner,
neighbour
);
List<polyPatch*> patches(patchStarts.size());
forAll (patches, p)
{
patches[p] = new polyPatch
(
patchNames[p],
patchSizes[p],
patchStarts[p],
p,
pMesh.boundaryMesh()
);
}
pMesh.addPatches(patches);
if (!pMesh.write())
{
FatalErrorIn("CV3D::writeMesh(const Time& runTime)")
<< "Failed writing polyMesh."
<< exit(FatalError);
}
}
// * * * * * * * * * * * * * * * IOstream Operators * * * * * * * * * * * * //
// ************************************************************************* //

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@ -1,112 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Application
CV3DMesher
Description
Conformal-Voronoi 3D automatic mesher
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "CV3D.H"
#include "IFstream.H"
using namespace Foam;
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Main program:
int main(int argc, char *argv[])
{
argList::noParallel();
argList::validArgs.clear();
argList::validArgs.append("surface");
argList::validOptions.insert("pointsFile", "<filename>");
# include "setRootCase.H"
# include "createTime.H"
// Read control dictionary
// ~~~~~~~~~~~~~~~~~~~~~~~
dictionary controlDict
(
IFstream(runTime.system()/args.executable() + "Dict")()
);
label nIterations(readLabel(controlDict.lookup("nIterations")));
// Read the surface to conform to
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
querySurface surf(args.args()[1]);
Info<< nl
<< "Read surface with " << surf.size() << " triangles from file "
<< args.args()[1] << nl << endl;
// Read and triangulation
// ~~~~~~~~~~~~~~~~~~~~~~
CV3D mesh(controlDict, surf);
if (args.options().found("pointsFile"))
{
fileName pointFileName(args.options()["pointsFile"]);
mesh.insertPoints(pointFileName);
mesh.insertSurfacePointPairs();
mesh.boundaryConform();
}
else
{
mesh.insertGrid();
mesh.insertSurfacePointPairs();
mesh.boundaryConform();
}
for (int iter=1; iter<=nIterations; iter++)
{
Info<< nl
<< "Relaxation iteration " << iter << nl
<< "~~~~~~~~~~~~~~~~~~~~~~~~" << endl;
mesh.removeSurfacePointPairs();
mesh.insertSurfacePointPairs();
mesh.boundaryConform();
}
mesh.write();
mesh.writeDual("dualMesh.obj");
mesh.writeMesh(runTime);
Info << nl << "End\n" << endl;
return 0;
}
// ************************************************************************* //

15
applications/utilities/mesh/generation/CV3DMesher/Make/files
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@ -1,15 +0,0 @@
#include CGAL_FILES
querySurface.C
CV3D.C
controls.C
tolerances.C
CV3DIO.C
CV3DMesher.C
calcDualMesh.C
insertFeaturePoints.C
insertSurfaceNearestPointPairs.C
insertSurfaceNearPointPairs.C
insertBoundaryConformPointPairs.C
EXE = $(FOAM_APPBIN)/CV3DMesher

18
applications/utilities/mesh/generation/CV3DMesher/Make/options
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@ -1,18 +0,0 @@
EXE_DEBUG = -DFULLDEBUG -g -O0
//EXE_DEBUG =
include $(GENERAL_RULES)/CGAL
FFLAGS = -DCGAL_FILES='"${CGAL_PATH}/CGAL/files"'
EXE_INC = \
${EXE_DEBUG} \
${CGAL_INC} \
-I$(LIB_SRC)/finiteVolume/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/dynamicMesh/lnInclude \
-I$(LIB_SRC)/triSurface/lnInclude
EXE_LIBS = \
-lmeshTools \
-ltriSurface \
-ldynamicMesh

421
applications/utilities/mesh/generation/CV3DMesher/calcDualMesh.C
View File

@ -1,421 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV3D.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
void Foam::CV3D::calcDualMesh
(
pointField& points,
faceList& faces,
labelList& owner,
labelList& neighbour,
wordList& patchNames,
labelList& patchSizes,
labelList& patchStarts
)
{
Info << nl << "Calculating Voronoi diagram." << endl;
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ dual points ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
points.setSize(number_of_cells());
label dualVerti = 0;
for
(
Triangulation::Finite_cells_iterator cit = finite_cells_begin();
cit != finite_cells_end();
++cit
)
{
if
(
cit->vertex(0)->internalOrBoundaryPoint()
|| cit->vertex(1)->internalOrBoundaryPoint()
|| cit->vertex(2)->internalOrBoundaryPoint()
|| cit->vertex(3)->internalOrBoundaryPoint()
)
{
cit->cellIndex() = dualVerti;
points[dualVerti] = topoint(dual(cit));
dualVerti++;
}
else
{
cit->cellIndex() = -1;
}
}
points.setSize(dualVerti);
// ~~~~~~~~~~~~~~~~~~~~~~~~~ dual cell indexing ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
// resets type and index information for Delaunay vertices
// assigns an index to the vertices which will be the dual cell index used
// for owner neighbour assignment
label dualCelli = 0;
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
++vit
)
{
if (vit->internalOrBoundaryPoint())
{
vit->type() = Vb::INTERNAL_POINT;
vit->index() = dualCelli;
dualCelli++;
}
else
{
vit->type() = Vb::FAR_POINT;
vit->index() = -1;
}
}
// ~~~~~~~~~~~~ dual face and owner neighbour construction ~~~~~~~~~~~~~~~~~
label nPatches = 1;
patchNames.setSize(nPatches);
patchNames[0] = "CV3D_default_patch";
patchSizes.setSize(nPatches);
patchStarts.setSize(nPatches);
List<DynamicList<face> > patchFaces(nPatches, DynamicList<face>(0));
List<DynamicList<label> > patchOwners(nPatches, DynamicList<label>(0));
faces.setSize(number_of_edges());
owner.setSize(number_of_edges());
neighbour.setSize(number_of_edges());
label dualFacei = 0;
for
(
Triangulation::Finite_edges_iterator eit = finite_edges_begin();
eit != finite_edges_end();
++eit
)
{
if
(
eit->first->vertex(eit->second)->internalOrBoundaryPoint()
|| eit->first->vertex(eit->third)->internalOrBoundaryPoint()
)
{
Cell_circulator ccStart = incident_cells(*eit);
Cell_circulator cc = ccStart;
DynamicList<label> verticesOnFace;
do
{
if (!is_infinite(cc))
{
if (cc->cellIndex() < 0)
{
FatalErrorIn
(
"Foam::CV3D::calcDualMesh"
)<< "Dual face uses circumcenter defined by a Delaunay"
" tetrahedron with no internal or boundary points."
<< exit(FatalError);
}
verticesOnFace.append(cc->cellIndex());
}
} while (++cc != ccStart);
verticesOnFace.shrink();
face newDualFace(verticesOnFace);
Cell_handle c = eit->first;
Vertex_handle vA = c->vertex(eit->second);
Vertex_handle vB = c->vertex(eit->third);
label dcA = vA->index();
if (!vA->internalOrBoundaryPoint())
{
dcA = -1;
}
label dcB = vB->index();
if (!vB->internalOrBoundaryPoint())
{
dcB = -1;
}
label dcOwn = -1;
label dcNei = -1;
if (dcA == -1 && dcB == -1)
{
FatalErrorIn("calcDualMesh")
<< "Attempting to create a face joining "
<< "two external dual cells "
<< exit(FatalError);
}
else if (dcA == -1 || dcB == -1)
{
// boundary face, find which is the owner
if (dcA == -1)
{
dcOwn = dcB;
// reverse face order to correctly orientate normal
reverse(newDualFace);
}
else
{
dcOwn = dcA;
}
// find which patch this face is on; Hardcoded for now.
label patchIndex = 0;
patchFaces[patchIndex].append(newDualFace);
patchOwners[patchIndex].append(dcOwn);
}
else
{
// internal face, find the lower cell to be the owner
if (dcB > dcA)
{
dcOwn = dcA;
dcNei = dcB;
}
else
{
dcOwn = dcB;
dcNei = dcA;
// reverse face order to correctly orientate normal
// unsure if CGAL always circulates consistently,
// needs to be more rigorous
reverse(newDualFace);
}
faces[dualFacei] = newDualFace;
owner[dualFacei] = dcOwn;
neighbour[dualFacei] = dcNei;
dualFacei++;
}
}
}
label nInternalFaces = dualFacei;
faces.setSize(nInternalFaces);
owner.setSize(nInternalFaces);
neighbour.setSize(nInternalFaces);
// ~~~~~~~~ sort owner, reordinging neighbour and faces to match ~~~~~~~~~~~
// two stage sort for upper triangular order: sort by owner first, then for
// each block of owners sort by neighbour
labelList sortingIndices;
// Stage 1
{
SortableList<label> sortedOwner(owner);
sortingIndices = sortedOwner.indices();
}
{
labelList copyOwner(owner.size());
forAll (sortingIndices, sI)
{
copyOwner[sI] = owner[sortingIndices[sI]];
}
owner = copyOwner;
}
{
labelList copyNeighbour(neighbour.size());
forAll (sortingIndices, sI)
{
copyNeighbour[sI] = neighbour[sortingIndices[sI]];
}
neighbour = copyNeighbour;
}
{
faceList copyFaces(faces.size());
forAll (sortingIndices, sI)
{
copyFaces[sI] = faces[sortingIndices[sI]];
}
faces = copyFaces;
}
// Stage 2
sortingIndices = -1;
DynamicList<label> ownerCellJumps;
// Force first owner entry to be a jump
ownerCellJumps.append(0);
for (label o = 1; o < owner.size(); o++)
{
if (owner[o] > owner[o-1])
{
ownerCellJumps.append(o);
}
}
ownerCellJumps.shrink();
forAll (ownerCellJumps, oCJ)
{
label start = ownerCellJumps[oCJ];
label length;
if (oCJ == ownerCellJumps.size() - 1)
{
length = owner.size() - start;
}
else
{
length = ownerCellJumps[oCJ + 1] - start;
}
SubList<label> neighbourBlock(neighbour, length, start);
SortableList<label> sortedNeighbourBlock(neighbourBlock);
forAll (sortedNeighbourBlock, sNB)
{
sortingIndices[start + sNB] =
sortedNeighbourBlock.indices()[sNB] + start;
}
}
// Perform sort
{
labelList copyOwner(owner.size());
forAll (sortingIndices, sI)
{
copyOwner[sI] = owner[sortingIndices[sI]];
}
owner = copyOwner;
}
{
labelList copyNeighbour(neighbour.size());
forAll (sortingIndices, sI)
{
copyNeighbour[sI] = neighbour[sortingIndices[sI]];
}
neighbour = copyNeighbour;
}
{
faceList copyFaces(faces.size());
forAll (sortingIndices, sI)
{
copyFaces[sI] = faces[sortingIndices[sI]];
}
faces = copyFaces;
}
// ~~~~~~~~ add patch information ~~~~~~~~~~~
label nBoundaryFaces = 0;
forAll (patchFaces, p)
{
patchFaces[p].shrink();
patchOwners[p].shrink();
// TODO SORT BOUNDARY FACES AND NEIGHBOURS?
patchSizes[p] = patchFaces[p].size();
patchStarts[p] = nInternalFaces + nBoundaryFaces;
nBoundaryFaces += patchSizes[p];
}
faces.setSize(nInternalFaces + nBoundaryFaces);
owner.setSize(nInternalFaces + nBoundaryFaces);
forAll (patchFaces, p)
{
forAll (patchFaces[p], f)
{
faces[dualFacei] = patchFaces[p][f];
owner[dualFacei] = patchOwners[p][f];
dualFacei++;
}
}
}
// ************************************************************************* //

56
applications/utilities/mesh/generation/CV3DMesher/controls.C
View File

@ -1,56 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV3D.H"
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::CV3D::controls::controls(const dictionary& controlDict)
:
minCellSize(readScalar(controlDict.lookup("minCellSize"))),
minCellSize2(Foam::sqr(minCellSize)),
featAngle(readScalar(controlDict.lookup("featureAngle"))),
maxQuadAngle(readScalar(controlDict.lookup("maxQuadAngle"))),
insertSurfaceNearestPointPairs
(
controlDict.lookup("insertSurfaceNearestPointPairs")
),
mirrorPoints(controlDict.lookup("mirrorPoints")),
insertSurfaceNearPointPairs
(
controlDict.lookup("insertSurfaceNearPointPairs")
),
writeInitialTriangulation(controlDict.lookup("writeInitialTriangulation")),
writeFeatureTriangulation(controlDict.lookup("writeFeatureTriangulation")),
writeNearestTriangulation(controlDict.lookup("writeNearestTriangulation")),
writeInsertedPointPairs(controlDict.lookup("writeInsertedPointPairs")),
writeFinalTriangulation(controlDict.lookup("writeFinalTriangulation")),
randomiseInitialGrid(controlDict.lookup("randomiseInitialGrid")),
randomPerturbation(readScalar(controlDict.lookup("randomPerturbation")))
{}
// ************************************************************************* //

154
applications/utilities/mesh/generation/CV3DMesher/indexedCell.H
View File

@ -1,154 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Class
indexedCell
Description
An indexed form of CGAL::Triangulation_cell_base_3<K> used to keep
track of the vertices in the triangulation.
\*---------------------------------------------------------------------------*/
#ifndef indexedCell_H
#define indexedCell_H
#include <CGAL/Triangulation_3.h>
#include "indexedVertex.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace CGAL
{
/*---------------------------------------------------------------------------*\
Class indexedCell Declaration
\*---------------------------------------------------------------------------*/
template<class Gt, class Cb=CGAL::Triangulation_cell_base_3<Gt> >
class indexedCell
:
public Cb
{
// Private data
//- The index for this triangle Cell
// -1: triangle and changed and associated data needs updating
// >=0: index of cells, set by external update algorithm
int index_;
public:
enum cellTypes
{
UNCHANGED = 0,
CHANGED = -1,
SAVE_CHANGED = -2
};
typedef typename Cb::Vertex_handle Vertex_handle;
typedef typename Cb::Cell_handle Cell_handle;
template < typename TDS2 >
struct Rebind_TDS
{
typedef typename Cb::template Rebind_TDS<TDS2>::Other Cb2;
typedef indexedCell<Gt, Cb2> Other;
};
indexedCell()
:
Cb(),
index_(CHANGED)
{}
indexedCell
(
Vertex_handle v0, Vertex_handle v1, Vertex_handle v2, Vertex_handle v3
)
:
Cb(v0, v1, v2, v3),
index_(CHANGED)
{}
indexedCell
(
Vertex_handle v0,
Vertex_handle v1,
Vertex_handle v2,
Vertex_handle v3,
Cell_handle n0,
Cell_handle n1,
Cell_handle n2,
Cell_handle n3
)
:
Cb(v0, v1, v2, v3, n0, n1, n2, n3),
index_(CHANGED)
{}
void set_vertex(int i, Vertex_handle v)
{
index_ = CHANGED;
Cb::set_vertex(i, v);
}
void set_vertices()
{
index_ = CHANGED;
Cb::set_vertices();
}
void set_vertices
(
Vertex_handle v0, Vertex_handle v1, Vertex_handle v2, Vertex_handle v3
)
{
index_ = CHANGED;
Cb::set_vertices(v0, v1, v2, v3);
}
int& cellIndex()
{
return index_;
}
int cellIndex() const
{
return index_;
}
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace CGAL
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

261
applications/utilities/mesh/generation/CV3DMesher/indexedVertex.H
View File

@ -1,261 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Class
indexedVertex
Description
An indexed form of CGAL::Triangulation_vertex_base_3<K> used to keep
track of the vertices in the triangulation.
\*---------------------------------------------------------------------------*/
#ifndef indexedVertex_H
#define indexedVertex_H
#include <CGAL/Triangulation_3.h>
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace CGAL
{
/*---------------------------------------------------------------------------*\
Class indexedVertex Declaration
\*---------------------------------------------------------------------------*/
template<class Gt, class Vb=CGAL::Triangulation_vertex_base_3<Gt> >
class indexedVertex
:
public Vb
{
// Private data
//- The index for this triangle vertex
int index_;
//- Index of pair-point :
// NEAR_BOUNDARY_POINT : internal near boundary point.
// INTERNAL_POINT : internal point.
// FAR_POINT : far-point.
// >= 0 : part of point-pair. Index of other point.
// Lowest numbered is inside one (master).
int type_;
public:
enum pointTypes
{
NEAR_BOUNDARY_POINT = -4,
INTERNAL_POINT = -3,
MIRROR_POINT = -2,
FAR_POINT = -1
};
typedef typename Vb::Vertex_handle Vertex_handle;
typedef typename Vb::Cell_handle Cell_handle;
typedef typename Vb::Point Point;
template<typename TDS2>
struct Rebind_TDS
{
typedef typename Vb::template Rebind_TDS<TDS2>::Other Vb2;
typedef indexedVertex<Gt,Vb2> Other;
};
indexedVertex()
:
Vb(),
index_(INTERNAL_POINT),
type_(INTERNAL_POINT)
{}
indexedVertex(const Point& p)
:
Vb(p),
index_(INTERNAL_POINT),
type_(INTERNAL_POINT)
{}
indexedVertex(const Point& p, Cell_handle f)
:
Vb(f, p),
index_(INTERNAL_POINT),
type_(INTERNAL_POINT)
{}
indexedVertex(Cell_handle f)
:
Vb(f),
index_(INTERNAL_POINT),
type_(INTERNAL_POINT)
{}
int& index()
{
return index_;
}
int index() const
{
return index_;
}
int& type()
{
return type_;
}
int type() const
{
return type_;
}
//- Is point a far-point
inline bool farPoint() const
{
return type_ == FAR_POINT;
}
//- Is point internal, i.e. not on boundary
inline bool internalPoint() const
{
return type_ <= INTERNAL_POINT;
}
//- Is point internal and near the boundary
inline bool nearBoundary() const
{
return type_ == NEAR_BOUNDARY_POINT;
}
//- Set the point to be near the boundary
inline void setNearBoundary()
{
type_ = NEAR_BOUNDARY_POINT;
}
//- Is point a mirror point
inline bool mirrorPoint() const
{
return type_ == MIRROR_POINT;
}
//- Either master or slave of pointPair.
inline bool pairPoint() const
{
return type_ >= 0;
}
//- Master of a pointPair is the lowest numbered one.
inline bool ppMaster() const
{
if (type_ > index_)
{
return true;
}
else
{
return false;
}
}
//- Slave of a pointPair is the highest numbered one.
inline bool ppSlave() const
{
if (type_ >= 0 && type_ < index_)
{
return true;
}
else
{
return false;
}
}
//- Either original internal point or master of pointPair.
inline bool internalOrBoundaryPoint() const
{
return internalPoint() || ppMaster();
}
//- Is point near the boundary or part of the boundary definition
inline bool nearOrOnBoundary() const
{
return pairPoint() || mirrorPoint() || nearBoundary();
}
//- Do the two given vertices consitute a boundary point-pair
inline friend bool pointPair
(
const indexedVertex& v0,
const indexedVertex& v1
)
{
return v0.index_ == v1.type_ || v1.index_ == v0.type_;
}
//- Do the three given vertices consitute a boundary triangle
inline friend bool boundaryTriangle
(
const indexedVertex& v0,
const indexedVertex& v1,
const indexedVertex& v2
)
{
return (v0.pairPoint() && pointPair(v1, v2))
|| (v1.pairPoint() && pointPair(v2, v0))
|| (v2.pairPoint() && pointPair(v0, v1));
}
//- Do the three given vertices consitute an outside triangle
inline friend bool outsideTriangle
(
const indexedVertex& v0,
const indexedVertex& v1,
const indexedVertex& v2
)
{
return (v0.farPoint() || v0.ppSlave())
|| (v1.farPoint() || v1.ppSlave())
|| (v2.farPoint() || v2.ppSlave());
}
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace CGAL
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

56
applications/utilities/mesh/generation/CV3DMesher/insertBoundaryConformPointPairs.C
View File

@ -1,56 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV3D.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
void Foam::CV3D::markNearBoundaryPoints()
{
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
vit++
)
{
if (vit->internalPoint())
{
point vert(topoint(vit->point()));
pointIndexHit pHit =
qSurf_.tree().findNearest(vert, 4*controls_.minCellSize2);
if (pHit.hit())
{
vit->setNearBoundary();
}
}
}
}
// ************************************************************************* //

178
applications/utilities/mesh/generation/CV3DMesher/insertFeaturePoints.C
View File

@ -1,178 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV3D.H"
#include "plane.H"
#include "triSurfaceTools.H"
#include "mathematicalConstants.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
void Foam::CV3D::insertFeaturePoints()
{
const edgeList& edges = qSurf_.edges();
const pointField& localPts = qSurf_.localPoints();
labelList featPoints(0);
labelListList featPointFeatEdges(0);
qSurf_.extractFeatures3D
(
controls_.featAngle,
featPoints,
featPointFeatEdges
);
forAll(featPoints, i)
{
label ptI = featPoints[i];
const point& featPt = localPts[ptI];
const labelList& featEdges = featPointFeatEdges[i];
forAll(featEdges, fE)
{
label edgeI = featEdges[fE];
const edge& featEdge = edges[edgeI];
// Check direction of edge, if the feature point is at the end()
// the reverse direction.
scalar edgeDirection = 1.0;
if (ptI == featEdge.end())
{
edgeDirection = -1.0;
}
point edgeLocalFeatPt = featPt
+ 2.0*tols_.ppDist*edgeDirection
* featEdge.vec(localPts)/featEdge.mag(localPts);
// Pick up the two faces adjacent to the feature edge
const labelList& eFaces = qSurf_.edgeFaces()[edgeI];
label faceA = eFaces[0];
vector nA = qSurf_.faceNormals()[faceA];
label faceB = eFaces[1];
vector nB = qSurf_.faceNormals()[faceB];
// Intersect planes parallel to faceA and faceB offset by ppDist
// and the plane defined by edgeLocalFeatPt and the edge vector.
plane planeA(edgeLocalFeatPt - tols_.ppDist*nA, nA);
plane planeB(edgeLocalFeatPt - tols_.ppDist*nB, nB);
plane planeF(edgeLocalFeatPt, featEdge.vec(localPts));
point refPt = planeF.planePlaneIntersect(planeA,planeB);
point faceAVert =
localPts[triSurfaceTools::oppositeVertex(qSurf_, faceA, edgeI)];
// Determine convex or concave angle
if (((faceAVert - edgeLocalFeatPt) & nB) < 0)
{
// Convex. So refPt will be inside domain and hence a master point
// Insert the master point refering the the first slave
label masterPtIndex = insertPoint(refPt, number_of_vertices() + 1);
// Insert the slave points by reflecting refPt in both faces.
// with each slave refering to the master
point reflectedA = refPt + 2*((edgeLocalFeatPt - refPt) & nA)*nA;
insertPoint(reflectedA, masterPtIndex);
point reflectedB = refPt + 2*((edgeLocalFeatPt - refPt) & nB)*nB;
insertPoint(reflectedB, masterPtIndex);
}
else
{
// Concave. master and reflected points inside the domain.
// Generate reflected master to be outside.
point reflMasterPt = refPt + 2*(edgeLocalFeatPt - refPt);
// Reflect refPt in both faces.
point reflectedA =
reflMasterPt + 2*((edgeLocalFeatPt - reflMasterPt) & nA)*nA;
point reflectedB =
reflMasterPt + 2*((edgeLocalFeatPt - reflMasterPt) & nB)*nB;
scalar totalAngle =
180*(mathematicalConstant::pi + acos(mag(nA & nB)))
/mathematicalConstant::pi;
// Number of quadrants the angle should be split into
int nQuads = int(totalAngle/controls_.maxQuadAngle) + 1;
// The number of additional master points needed to obtain the
// required number of quadrants.
int nAddPoints = min(max(nQuads - 2, 0), 2);
// index of reflMaster
label reflectedMaster = number_of_vertices() + 2 + nAddPoints;
// Master A is inside.
label reflectedAI = insertPoint(reflectedA, reflectedMaster);
// Master B is inside.
insertPoint(reflectedB, reflectedMaster);
if (nAddPoints == 1)
{
// One additinal point is the reflection of the slave point,
// i.e. the original reference point
insertPoint(refPt, reflectedMaster);
}
else if (nAddPoints == 2)
{
point reflectedAa = refPt
- ((edgeLocalFeatPt - reflMasterPt) & nB)*nB;
insertPoint(reflectedAa, reflectedMaster);
point reflectedBb = refPt
- ((edgeLocalFeatPt - reflMasterPt) & nA)*nA;
insertPoint(reflectedBb, reflectedMaster);
}
// Slave is outside.
insertPoint(reflMasterPt, reflectedAI);
}
}
}
if (controls_.writeFeatureTriangulation)
{
writePoints("feat_allPoints.obj", false);
writePoints("feat_points.obj", true);
writeTriangles("feat_triangles.obj", true);
}
}
// ************************************************************************* //

45
applications/utilities/mesh/generation/CV3DMesher/insertSurfaceNearPointPairs.C
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@ -1,45 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV3D.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
void Foam::CV3D::insertSurfaceNearPointPairs()
{
Info<< "insertSurfaceNearPointPairs: " << nl << endl;
label nNearPoints = 0;
// This needs a rethink from scratch in 3D.
// Probably iterating around the facets rather than edges
// Remember about the incident_edges, cells etc
Info<< nNearPoints << " point-pairs inserted" << endl;
}
// ************************************************************************* //

230
applications/utilities/mesh/generation/CV3DMesher/insertSurfaceNearestPointPairs.C
View File

@ -1,230 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV3D.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
bool Foam::CV3D::dualCellSurfaceIntersection
(
const Triangulation::Finite_vertices_iterator& vit
) const
{
std::list<Facet> facets;
incident_facets(vit, std::back_inserter(facets));
for
(
std::list<Facet>::iterator fit=facets.begin();
fit != facets.end();
++fit
)
{
if
(
is_infinite(fit->first)
|| is_infinite(fit->first->neighbor(fit->second))
)
{
return true;
}
point dE0 = topoint(dual(fit->first));
// If edge end is outside bounding box then edge cuts boundary
if (!qSurf_.bb().contains(dE0))
{
return true;
}
point dE1 = topoint(dual(fit->first->neighbor(fit->second)));
// If other edge end is outside bounding box then edge cuts boundary
if (!qSurf_.bb().contains(dE1))
{
return true;
}
if (magSqr(dE1 - dE0) > tols_.minEdgeLen2)
{
pointIndexHit pHit = qSurf_.tree().findLineAny(dE0, dE1);
if (pHit.hit())
{
return true;
}
}
}
return false;
}
void Foam::CV3D::insertPointPairs
(
const DynamicList<point>& nearSurfacePoints,
const DynamicList<point>& surfacePoints,
const DynamicList<label>& surfaceTris,
const fileName fName
)
{
if (controls_.mirrorPoints)
{
forAll(surfacePoints, ppi)
{
insertMirrorPoint
(
nearSurfacePoints[ppi],
surfacePoints[ppi]
);
}
}
else
{
forAll(surfacePoints, ppi)
{
insertPointPair
(
tols_.ppDist,
surfacePoints[ppi],
qSurf_.faceNormals()[surfaceTris[ppi]]
);
}
}
Info<< surfacePoints.size() << " point-pairs inserted" << endl;
if (controls_.writeInsertedPointPairs)
{
OFstream str(fName);
label vertI = 0;
forAll(surfacePoints, ppi)
{
meshTools::writeOBJ(str, surfacePoints[ppi]);
vertI++;
}
Info<< "insertPointPairs: Written " << surfacePoints.size()
<< " inserted point-pair locations to file "
<< str.name() << endl;
}
}
void Foam::CV3D::insertSurfaceNearestPointPairs()
{
Info<< "insertSurfaceNearestPointPairs: " << nl << endl;
label nSurfacePointsEst = number_of_vertices();
DynamicList<point> nearSurfacePoints(nSurfacePointsEst);
DynamicList<point> surfacePoints(nSurfacePointsEst);
DynamicList<label> surfaceTris(nSurfacePointsEst);
// Local references to surface mesh addressing
const pointField& localPoints = qSurf_.localPoints();
const labelListList& edgeFaces = qSurf_.edgeFaces();
const vectorField& faceNormals = qSurf_.faceNormals();
const labelListList& faceEdges = qSurf_.faceEdges();
for
(
Triangulation::Finite_vertices_iterator vit = finite_vertices_begin();
vit != finite_vertices_end();
vit++
)
{
if (vit->internalPoint())
{
point vert(topoint(vit->point()));
pointIndexHit pHit = qSurf_.tree().findNearest
(
vert,
4*controls_.minCellSize2
);
if (pHit.hit())
{
vit->setNearBoundary();
// Reference to the nearest triangle
const labelledTri& f = qSurf_[pHit.index()];
// Find where point is on triangle.
// Note tolerance needed is relative one
// (used in comparing normalized [0..1] triangle coordinates).
label nearType, nearLabel;
triPointRef
(
localPoints[f[0]],
localPoints[f[1]],
localPoints[f[2]]
).classify(pHit.hitPoint(), 1e-6, nearType, nearLabel);
// If point is on a edge check if it is an internal feature
bool internalFeatureEdge = false;
if (nearType == triPointRef::EDGE)
{
label edgeI = faceEdges[pHit.index()][nearLabel];
const labelList& eFaces = edgeFaces[edgeI];
if
(
eFaces.size() == 2
&& (faceNormals[eFaces[0]] & faceNormals[eFaces[1]])
< -0.2
)
{
internalFeatureEdge = true;
}
}
if (!internalFeatureEdge && dualCellSurfaceIntersection(vit))
{
nearSurfacePoints.append(vert);
surfacePoints.append(pHit.hitPoint());
surfaceTris.append(pHit.index());
}
}
}
}
insertPointPairs
(
nearSurfacePoints,
surfacePoints,
surfaceTris,
"surfaceNearestIntersections.obj"
);
}
// ************************************************************************* //

296
applications/utilities/mesh/generation/CV3DMesher/querySurface.C
View File

@ -1,296 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "querySurface.H"
#include "mathematicalConstants.H"
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::querySurface::querySurface(const fileName& surfaceFileName)
:
triSurface(surfaceFileName),
rndGen_(12345),
bb_(localPoints()),
tree_
(
treeDataTriSurface(*this),
bb_.extend(rndGen_, 1e-3), // slightly randomize bb
8, // maxLevel
4, //10, // leafsize
10.0 //3.0 // duplicity
)
{}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::querySurface::~querySurface()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::labelList Foam::querySurface::extractFeatures2D
(
const scalar featAngle
) const
{
scalar featCos = cos(mathematicalConstant::pi*featAngle/180.0);
const labelListList& edgeFaces = this->edgeFaces();
const pointField& localPoints = this->localPoints();
const edgeList& edges = this->edges();
const vectorField& faceNormals = this->faceNormals();
DynamicList<label> featEdges(edges.size());
forAll(edgeFaces, edgeI)
{
const edge& e = edges[edgeI];
if (magSqr(e.vec(localPoints) & vector(1,1,0)) < SMALL)
{
const labelList& eFaces = edgeFaces[edgeI];
if
(
eFaces.size() == 2
&& (faceNormals[eFaces[0]] & faceNormals[eFaces[1]]) < featCos
)
{
featEdges.append(edgeI);
}
}
}
return featEdges.shrink();
}
void Foam::querySurface::extractFeatures3D
(
const scalar featAngle,
labelList& featPoints,
labelListList& featPointFeatEdges
) const
{
scalar featCos = cos(mathematicalConstant::pi*featAngle/180.0);
const labelListList& edgeFaces = this->edgeFaces();
const labelListList& pointEdges = this->pointEdges();
const pointField& localPoints = this->localPoints();
// const edgeList& edges = this->edges();
const vectorField& faceNormals = this->faceNormals();
DynamicList<label> tempFeatPoints(localPoints.size());
DynamicList<DynamicList<label> > tempFeatPointFeatEdges(localPoints.size());
forAll(pointEdges, ptI)
{
// const point& p = localPoints[ptI];
// const vector& pNormal = pointNormals[ptI];
const labelList& pEdges = pointEdges[ptI];
DynamicList<label> tempFeatEdges(0);
forAll(pEdges, pE)
{
label edgeI = pEdges[pE];
const labelList& eFaces = edgeFaces[edgeI];
if
(
eFaces.size() == 2
&& (faceNormals[eFaces[0]] & faceNormals[eFaces[1]]) < featCos
)
{
tempFeatEdges.append(edgeI);
}
}
tempFeatEdges.shrink();
if(tempFeatEdges.size())
{
tempFeatPoints.append(ptI);
tempFeatPointFeatEdges.append(tempFeatEdges);
}
}
featPoints.transfer(tempFeatPoints.shrink());
tempFeatPointFeatEdges.shrink();
featPointFeatEdges.setSize(tempFeatPointFeatEdges.size());
forAll(featPointFeatEdges, fPFE)
{
featPointFeatEdges[fPFE].transfer(tempFeatPointFeatEdges[fPFE].shrink());
}
}
Foam::indexedOctree<Foam::treeDataTriSurface>::volumeType
Foam::querySurface::insideOutside
(
const scalar searchSpan2,
const point& pt
) const
{
if (!bb_.contains(pt))
{
return indexedOctree<treeDataTriSurface>::OUTSIDE;
}
pointIndexHit pHit = tree_.findNearest(pt, searchSpan2);
if (!pHit.hit())
{
return tree_.getVolumeType(pt);
}
else
{
return indexedOctree<treeDataTriSurface>::MIXED;
}
}
// Check if point is inside surface
bool Foam::querySurface::inside(const point& pt) const
{
if (!bb_.contains(pt))
{
return false;
}
return
(
tree_.getVolumeType(pt) == indexedOctree<treeDataTriSurface>::INSIDE
);
}
// Check if point is outside surface
bool Foam::querySurface::outside(const point& pt) const
{
if (!bb_.contains(pt))
{
return true;
}
return
(
tree_.getVolumeType(pt) == indexedOctree<treeDataTriSurface>::OUTSIDE
);
}
// Check if point is inside surface by at least dist2
bool Foam::querySurface::wellInside(const point& pt, const scalar dist2) const
{
if (!bb_.contains(pt))
{
return false;
}
pointIndexHit pHit = tree_.findNearest(pt, dist2);
if (pHit.hit())
{
return false;
}
else
{
return
tree_.getVolumeType(pt)
== indexedOctree<treeDataTriSurface>::INSIDE;
}
}
// Check if point is outside surface by at least dist2
bool Foam::querySurface::wellOutside(const point& pt, const scalar dist2) const
{
if (!bb_.contains(pt))
{
return true;
}
pointIndexHit pHit = tree_.findNearest(pt, dist2);
if (pHit.hit())
{
return false;
}
else
{
return
tree_.getVolumeType(pt)
== indexedOctree<treeDataTriSurface>::OUTSIDE;
}
}
void Foam::querySurface::writeTreeOBJ() const
{
OFstream str("tree.obj");
label vertI = 0;
const List<indexedOctree<treeDataTriSurface>::node>& nodes = tree_.nodes();
forAll(nodes, nodeI)
{
const indexedOctree<treeDataTriSurface>::node& nod = nodes[nodeI];
const treeBoundBox& bb = nod.bb_;
const pointField points(bb.points());
label startVertI = vertI;
forAll(points, i)
{
meshTools::writeOBJ(str, points[i]);
vertI++;
}
const edgeList edges(treeBoundBox::edges);
forAll(edges, i)
{
const edge& e = edges[i];
str << "l " << e[0]+startVertI+1 << ' ' << e[1]+startVertI+1
<< nl;
}
}
}
// ************************************************************************* //

158
applications/utilities/mesh/generation/CV3DMesher/querySurface.H
View File

@ -1,158 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Class
querySurface
Description
Searchable triSurface using an octree to speed-up queries.
SourceFiles
querySurface.C
\*---------------------------------------------------------------------------*/
#ifndef querySurface_H
#define querySurface_H
#include "triSurface.H"
#include "treeDataTriSurface.H"
#include "indexedOctree.H"
#include "Random.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class querySurface Declaration
\*---------------------------------------------------------------------------*/
class querySurface
:
public triSurface
{
// Private data
Random rndGen_;
// Bounding box of surface. Used for relative tolerances.
treeBoundBox bb_;
// Search engine on surface
indexedOctree<treeDataTriSurface> tree_;
// Private Member Functions
//- Disallow default bitwise copy construct
querySurface(const querySurface&);
//- Disallow default bitwise assignment
void operator=(const querySurface&);
public:
// Constructors
//- Construct given file name of the surface
querySurface(const fileName& surfaceFileName);
// Destructor
~querySurface();
// Member Functions
// Access
const treeBoundBox& bb() const
{
return bb_;
}
const indexedOctree<treeDataTriSurface>& tree() const
{
return tree_;
}
// Query
//- Extract feature edges/points(2D)
// using the given feature angle in deg
labelList extractFeatures2D(const scalar featAngle) const;
//- Extract feature edges/points(3D)
// using the given feature angle in deg
void extractFeatures3D
(
const scalar featAngle,
labelList& featPoints,
labelListList& featPointFeatEdges
) const;
//- Returns inside, outside or mixed (= close to surface)
indexedOctree<Foam::treeDataTriSurface>::volumeType insideOutside
(
const scalar searchSpan2,
const point& pt
) const;
//- Check if point is inside surface
bool inside(const point& pt) const;
//- Check if point is outside surface
bool outside(const point& pt) const;
//- Check if point is inside surface by at least dist2
bool wellInside(const point& pt, const scalar dist2) const;
//- Check if point is outside surface by at least dist2
bool wellOutside(const point& pt, const scalar dist2) const;
// Write
void writeTreeOBJ() const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
//#include "querySurfaceI.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

54
applications/utilities/mesh/generation/CV3DMesher/tolerances.C
View File

@ -1,54 +0,0 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2007 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
\*----------------------------------------------------------------------------*/
#include "CV3D.H"
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::CV3D::tolerances::tolerances
(
const dictionary& controlDict,
const scalar minCellSize,
const boundBox& bb
)
:
span
(
max(mag(bb.max().x()), mag(bb.min().x()))
+ max(mag(bb.max().y()), mag(bb.min().y()))
+ max(mag(bb.max().z()), mag(bb.min().z()))
),
span2(Foam::sqr(span)),
minEdgeLen(readScalar(controlDict.lookup("minEdgeLenCoeff"))*minCellSize),
minEdgeLen2(Foam::sqr(minEdgeLen)),
ppDist(readScalar(controlDict.lookup("ppDistCoeff"))*minCellSize),
ppDist2(Foam::sqr(ppDist))
{}
// ************************************************************************* //