Commit Graph

15257 Commits

Author SHA1 Message Date
5d6bf3e43d ENH: HashTable improvements
- optimize erasure using different HashTable based on its size.
  Eg, hashtable.erase(other);

  If 'other' is smaller than the hashtable, it is more efficient to
  use the keys from other to remove from the hashtable.

  Otherwise simply iterate over the hashtable and remove it if
  that key was found in other.
2017-04-30 10:21:10 +02:00
c65e2e580d ENH: add some standard templates and macros into stdFoam.H
- some functionality similar to what the standary library <iterator>
  provides.

  * stdFoam::begin() and stdFoam::end() do type deduction,
    which means that many cases it is possible to manage these types
    of changes.

    For example, when managing a number of indices:
       Map<labelHashSet> lookup;

    1) Longhand:

        for
        (
            Map<labelHashSet>::const_iterator iter = lookup.begin();
            iter != lookup.end();
            ++iter
        )
        { .... }

    1b) The same, but wrapped via a macro:

        forAllConstIter(Map<labelHashSet>, lookup, iter)
        { .... }

    2) Using stdFoam begin/end templates directly

        for
        (
            auto iter = stdFoam::begin(lookup);
            iter != stdFoam::end(lookup);
            ++iter
        )
        { .... }

    2b) The same, but wrapped via a macro:

        forAllConstIters(lookup, iter)
        { .... }

Note that in many cases it is possible to simply use a range-based for.
Eg,
     labelList myList;

     for (auto val : myList)
     { ... }

     for (const auto& val : myList)
     { ... }

These however will not work with any of the OpenFOAM hash-tables,
since the standard C++ concept of an iterator would return a key,value
pair when deferencing the *iter.

The deduction methods also exhibits some slightly odd behaviour with
some PtrLists (needs some more investigation).
2017-04-29 22:28:16 +02:00
6a5ea9a2bf ENH: improve HashSet construction and assignment
- make construct from UList explicit and provide corresponding
  assignment operator.

- add construct,insert,set,assignment from FixedList.
  This is convenient when dealing with things like edges or triFaces.
2017-04-29 15:19:47 +02:00
a2ddf7dd48 ENH: support HashTable erasure via a FixedList
- propagate common erasure methods as HashSet::unset() method,
  for symmetry with HashSet::set()
2017-04-29 14:50:46 +02:00
ded105c539 STYLE: HashTable documentation
- explicitly mention the value-initialized status for the operator().
  This means that the following code will properly use an initialized
  zero.

      HashTable<label> regionCount;

      if (...)
         regionCount("region1")++;

      ... and also this;

      if (regionCount("something") > 0)
      {
          ...
      }

  Note that the OpenFOAM HashTable uses operator[] to provide read and
  write access to *existing* entries and will provoke a FatalError if
  the entry does not exist.

  The operator() provides write access to *existing* entries or will
  create the new entry as required.
  The STL hashes use operator[] for this purpose.
2017-04-29 12:27:11 +02:00
1d9b311b82 ENH: further refinement to edge methods
- more hash-like methods.
  Eg, insert/erase via lists, clear(), empty(),...

- minVertex(), maxVertex() to return the smallest/largest label used

- improved documentation, more clarification about where/how negative
  point labels are treated.
2017-04-29 12:14:46 +02:00
7edd801c72 BUG: wall/patch distance and inverseDistanceDiffusivity - updated dimensions and use meshWave as a default method for backwards compatibility. Fixes #462 2017-05-04 11:33:00 +01:00
076cf421f3 cloudSolution: Check consistency between the transient option
and the continuous-phase simulation type

For LTS and steady-state simulations the transient option does not need to be
provided as only steady-state tracking is appropriate.  For transient running
the Lagrangian tracking may be steady or transient.
2017-08-22 13:58:25 +01:00
3f5103235e KinematicParcel: Apply in-cell updates before hitting the face
The evolution of a KinematicParcel happens in three stages; (1) tracking
across the cell, (2) interaction with the face or patch that has been
hit, and (3) clculation and and update of parcel and cell properties.
The KinematicParcel used to evolve in this order, as steps 1 and 2 were
part of the same lower level method. This meant that the update stage
was done after interacting with the face, meaning the parcel was not in
the cell that had just been tracked through, or, by means of a patch
interaction, had been modified such that it was no longer representative
of the track through the cell.

With the separation of stages 1 and 2 in the base class, it is now
possible to do the update stage before interacting with the face (i.e.,
proceeding in the order 1, 3, 2). This makes the state consistent for
the updates, and avoids the issues described.

Patch contributed by Timo Niemi, VTT.
This resolves bug report https://bugs.openfoam.org/view.php?id=2282
2017-08-16 09:56:04 +01:00
f021409db3 lagrangian: Made ACMI interactions insensitive to cell-face order 2017-08-11 10:22:03 +01:00
66349c60a1 lagrangian: Removed debugging message from particle::trackToFace 2017-08-11 08:34:42 +01:00
9b57ef06cf Lagrangian: Enabled tracking through ACMI patches and minor code improvements
Particle collisions with ACMI patches are now handled. The hit detects
whether the location is within the overlap or the coupled region and
recurses, calling the hit routine appropriate for the region.

The low level tracking methods are now more consistently named. There is
now a distinction between tracking to a face and hitting it. Function
object side effects have been moved out of the base layer and into the
parcels on which they are meaningful.
2017-08-09 15:52:33 +01:00
c0bc17ea50 ThermoParcel: Improved numerical stability of heat transfer term
Patch contributed by Timo Niemi, VTT.
Resolves bug-report https://bugs.openfoam.org/view.php?id=2655
2017-08-07 17:58:07 +01:00
0a97c3fc95 lagrangian: Always set switchProcessor flag
The TrackData::switchProcessor flag was not being set for some of the
tracking steps made by the more complicated parcels. In the case that a
parcel starts the step already on a processor boundary, this sometimes
lead to the particle being transferred back and forth indefinitely. The
flag is now explicitly set in all cases.
2017-08-02 10:17:38 +01:00
2a6b16f522 lagrangian: Fixed argument passing from Colliding to Kinematic parcel component constructor
Resolves bug report https://bugs.openfoam.org/view.php?id=2643
2017-07-31 16:55:24 +01:00
a4762ea6ea lagrangian: Fixed infinite loops
Tracking through an inverted region of the mesh happens in a reversed
direction relative to a non-inverted region. Usually, this allows the
tracking to propagate normally, regardless of the sign of the space.
However, in rare cases, it is possible for a straight trajectory to form
a closed loop through both positive and negative regions. This causes
the tracking to loop indefinitely.

To fix this, the displacement through inverted regions has been
artifically increased by a small amount (1% at the moment). This has the
effect that the change in track fraction over the negative part of the
loop no longer exactly cancels the change over the positive part, and
the track therefore terminates.
2017-07-18 09:19:32 +01:00
e274e08b1a lagrangian: Corrected patch data
The KinematicCloud::patchData method has been made consistent on moving
meshes and/or when the time-step is being sub-cycled.

It has also been altered to calculate the normal component of a moving
patch's velocity directly from the point motions. This prevents an
infinite loop occuring due to inconsistency between the velocity used to
calculate a rebound and that used when tracking.

Some minor style improvements to the particle class have also been made.
2017-07-13 09:11:03 +01:00
c9b3744637 ParticleCollector: Prevented missing and duplicate collections
The particle collector was collecting some particles twice due to a
tolerance extending the tracked path. This has been removed. The new
tracking algorithm does not generate the same sorts of spurious
tolerance-scale motions that the old one did, so this extension of the
tracking path is unnecessary.

Some particles were also not being collected at all as they were hitting
a diagonal of the collection polygon and registering as not having hit
either of the adjacent triangles. The hit criteria has been rewritten. A
hit now occurs when the normals of the triangles created by joining the
intersection point with the polygon edges are all in the same direction
as the overall polygon normal. This calculation is not affected by the
polygon's diagonals.

The issue was raised by, and resolved with support from, Karl Meredith
at FM Global.

This resolves bug-report https://bugs.openfoam.org/view.php?id=2595
2017-07-05 09:26:56 +01:00
6b316ba3a9 interpolation: Optimise by using particle local coordinates
This change changes the point-tetIndices-face interpolation function
method to take barycentric-tetIndices-face arguments instead. This
function is, at present, only used for interpolating Eulerian data to
Lagrangian particles.

This change prevents an inefficiency in cellPointInterpolation whereby
the position of the particle is calculated from it's barycentric
coordinates, before immediately being converted back to barycentric
coordinates to perform the interpolation.
2017-06-06 16:07:56 +01:00
7a02a507d5 MPPIC: Optimised the averaging methods
The averaging methods now take the particle barycentric coordinates as
inputs rather than global positions. This change significantly optimises
Dual averaging, which is the most commonly used method. The run time of
the lagrangian/MPPICFoam/Goldschmidt tutorial has been reduced by a
factor of about two.
2017-06-01 14:49:38 +01:00
e9fb8b8572 tetIndices: Removed duplicate logic
The logic for generating tetrahedra from a face base point and an offset
was duplicated in a few places. It is now confined to the tetIndices
class.
2017-06-01 09:59:38 +01:00
a28f84c3a2 lagrangian::InjectionModels: Corrected documentation 2017-06-27 08:24:18 +01:00
3620876a40 CollidingCloud: Allow instantiation of the NoCollision model for steady-state operation 2017-06-19 15:38:46 +01:00
62e3d37324 primitiveShapes: Generalised tetrahedron and triangle cutting. Cuts are
now possible with level-sets as well as planes. Removed tetPoints class
as this wasn't really used anywhere except for the old tet-cutting
routines. Restored tetPointRef.H to be consistent with other primitive
shapes. Re-wrote tet-overlap mapping in terms of the new cutting.
2017-05-22 11:40:37 +01:00
04c11064b3 particle: Corrected the direction of tracking when passing through an
AMI. Applied the transformation.
2017-05-04 18:25:41 +01:00
655741b804 KinematicParcel: Bug fix. Restored steady particle tracking coupling.
This was broken when the minimum-step-fraction tolerance was removed.
2017-05-03 12:46:19 +01:00
d75eb94404 particle: Avoid warning about uninitialized edge 2017-04-28 12:08:21 +01:00
1a24be6e54 Merge branch 'feature-random-numbers' into 'develop'
Updated random numbers

See merge request !107
2017-04-28 10:11:18 +01:00
0b42024c98 ENH: turbulentDFSEMInlet - ensure different procs initialise the random number generator with a different seed 2017-04-28 10:01:43 +01:00
7f0cc0045d ENH: Random numbers - updated dependent code from change cachedRandom->Random class 2017-04-28 09:15:52 +01:00
b07bc1f0b8 ENH: Random numbers - consolidated Random classes
- old Random class deprecated
- cachedRandom renamed Random
2017-04-28 09:07:42 +01:00
da8ea0f21a ENH: refactor code from surfaceFeatureExtract to triSurfaceTools (issue #450) 2017-04-28 09:12:33 +02:00
743dea87d2 Lagrangian: Rewrite of the particle tracking algorithm to function in
terms of the local barycentric coordinates of the current tetrahedron,
rather than the global coordinate system.

Barycentric tracking works on any mesh, irrespective of mesh quality.
Particles do not get "lost", and tracking does not require ad-hoc
"corrections" or "rescues" to function robustly, because the calculation
of particle-face intersections is unambiguous and reproducible, even at
small angles of incidence.

Each particle position is defined by topology (i.e. the decomposed tet
cell it is in) and geometry (i.e. where it is in the cell). No search
operations are needed on restart or reconstruct, unlike when particle
positions are stored in the global coordinate system.

The particle positions file now contains particles' local coordinates
and topology, rather than the global coordinates and cell. This change
to the output format is not backwards compatible. Existing cases with
Lagrangian data will not restart, but they will still run from time
zero without any modification. This change was necessary in order to
guarantee that the loaded particle is valid, and therefore
fundamentally prevent "loss" and "search-failure" type bugs (e.g.,
2517, 2442, 2286, 1836, 1461, 1341, 1097).

The tracking functions have also been converted to function in terms
of displacement, rather than end position. This helps remove floating
point error issues, particularly towards the end of a tracking step.

Wall bounded streamlines have been removed. The implementation proved
incompatible with the new tracking algorithm. ParaView has a surface
LIC plugin which provides equivalent, or better, functionality.

Additionally, bug report <https://bugs.openfoam.org/view.php?id=2517>
is resolved by this change.
2017-04-28 08:03:44 +01:00
dd3be135de ENH: cuttingPlane: suppress excessive warning message. Fixes #596. 2017-09-21 09:14:58 +01:00
76c68c884f ENH: isoSurface: additional debug message 2017-09-21 09:12:16 +01:00
2a586dcbe2 Merge remote-tracking branch 'origin/master' into develop 2017-09-15 11:20:35 +02:00
9238c90e6f Merge branch 'feature-surfacefield-value' into 'develop'
Feature surface field value operations

See merge request !141
2017-09-12 08:37:46 +01:00
6ec186bada ENH: a weighted operation without a weightField is an error (issue #583)
- affects surfaceFieldValue, volFieldValue.

  Use 'none' (if desired) to explicitly suppress the weightField, but
  generally better to use a different operation.
2017-09-11 18:10:41 +02:00
3392965aba ENH: scaling: added scaling to various sampling routines. See #514. 2017-08-17 12:47:45 +01:00
139edb2468 ENH: add input surface scaling (issue #514)
- surfaceFeatureExtract
  * dictionary "scale" entry

- triSurface
- triSurfaceLoader
  * optional scaleFactor on reading

- surfaceAdd
- surfaceBooleanFeatures
- surfaceClean
- surfaceCoarsen
  * scale option

- surfaceTransformPoints, transformPoints
  * scale option as scalar or vector quantity
2017-08-14 09:18:15 +02:00
775f39960f Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2017-09-06 12:27:38 +01:00
dbc0bbc903 ENH: extrudeMesh: preserve hexRef8Data. Fixes #471. 2017-09-06 12:24:32 +01:00
92ce092e2b Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2017-08-31 14:08:26 +01:00
35090ebdc3 Merge branch 'master' into develop 2017-08-31 14:08:17 +01:00
2f2e0cf1a6 BUG: fluxSummary: incorrect handling of flipMap. Fixes #530. 2017-08-30 17:27:07 +01:00
0e7954c22b BUG: sampledTriSurfaceMesh: sampling outside of mesh. Fixes #575.
There are a few issues:
- error would only throw exceptions if not parallel
- if we change this we also need to make sure the functionObjectList
  construction is synchronised
- bounding box overlap was not returning the correct status so the code
  to avoid the issue of 'badly formed bounding box' was not triggered.
2017-08-29 14:41:22 +01:00
bd762c94d0 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2017-08-17 11:00:51 +01:00
cf0ffa1933 BUG: nearWallFields: point on the face is inside/outside any tet.
Now we directly releate the intersected face triangle to the tet of the
cell the point is on/in. We hope that the tracking handles this ok. Fixes #549.
2017-08-17 10:58:56 +01:00
3093b32702 ENH: support pTotal as a derived field for surfMeshSamplers (issue #567) 2017-08-11 16:40:08 +02:00
4588182352 ENH: add absolute weighting for surfaceFieldValue (issue #567)
- can be useful either for flow-rate weighting where backflow
  is to be ignored in the average, or for flow-rate weighting
  on surfaces with inconsistent orientation.

  Reworked to code to make better use of Enum (the NamedEnum
  replacement). Enum doesn't require contiguous enumeration values,
  which lets us use bitmasking of similar operations to reduce
  duplicate code.
2017-08-11 14:53:24 +02:00