Commit Graph

125 Commits

Author SHA1 Message Date
3963cd95d9 STYLE: code cleanup in fileFormats, conversion 2018-07-24 16:12:32 +02:00
c1964d7807 ENH: distinguish between face areaNormal/unitNormal in the code 2018-08-10 15:43:06 +02:00
b5162f91fc STYLE: use DynamicList instead of LIFO for managing tags in vtk::formatter 2018-08-09 08:57:48 +02:00
0e996431b7 STYLE: relocate STRING_QUOTE macro to macros.H 2018-08-02 16:26:25 +02:00
94a89d530a COMP: reduce compiler warnings for gcc-7
- ignore implicit-fallthrough for ragel generated code.

- add -Wno-deprecated-declarations for c++LESSWARN.
  These principally associated with older CGAL versions and their use
  of particular mpfr routines.
2018-07-24 09:29:01 +02:00
1f953b807c ENH: use double for VTK legacy output (issue #891)
- some paraview versions (eg, on windows) don't support float, only double.

  This mostly affected the vtkSurfaceWriter.

  The foamToVTK is also affected, but since it also supports the XML
  output formats (vtp, vtu) these can be used instead.
2018-06-21 10:24:04 +02:00
813a0500e2 BUG: incorrect order for VTK symmTensor (fixes #892)
- affected manually generated legacy output (vtkSetWriter, vtkSurfaceWriter)

- the order emitted by vtkSetWriter remains, but needs to revisited again.
2018-06-21 09:38:25 +02:00
c5518dd9ff ENH: additional vtk tools for faceNormals, writing file-series 2018-06-15 22:44:00 +02:00
c909a5df25 GIT: resolved merge conflict 2018-06-13 14:20:18 +01:00
cf0a288ead STYLE: typo in copyright dates 2018-06-12 09:03:30 +02:00
7402cd7b5a ENH: make sampleSets setSamples movable - preliminary to issue #869
- add some more documentation
2018-06-12 19:19:10 +02:00
b393c60d86 ENH: vtk: fix reading of inverted prisms. Fixes #850. 2018-05-31 12:42:43 +01:00
f9fe71815a STYLE: consistent use of '= delete' for removed constructors/assignments
- make the purpose more explicit, and reduces some work for the
  compiler as well.
2018-05-30 12:03:17 +02:00
6b6b36afd3 STYLE: revert bitSet/HashSet setMany() to set() method (issue #837)
- improves backward compatibility and more naming consistency.
  Retain setMany(iter1, iter2) to avoid ambiguity with the
  PackedList::set(index, value) method.
2018-05-29 17:38:02 +02:00
30309e9a65 COMP: 64-bit label ambiguity 2018-05-29 11:16:20 +02:00
5c60cbe34d ENH: improve ensightWrite handling of moving mesh
- now treat all mesh geometries as moving, since we cannot know
  beforehand if this is the case.
2018-05-08 12:41:06 +02:00
dbe16de58c ENH: cleaner, more consistent ensight case surface output files
- use same data mask width as ensightCase (8 digits)

- consolidate geometry time steps with data time steps if possible,
  for a cleaner case file.
2018-05-08 08:15:31 +02:00
01a313d889 BUG: collated ensight not working with isosurfaces (closes #318)
- the problem arises since the various surface writers are stateless.
  The collated output format hacks around this limitation by adding in
  its own fieldDict caching (to disk).

  Now include an updateMesh() method to hook into geometry changes.
  This is considered a stop-gap measure until the surface output
  handling is improved.
2018-05-07 16:59:15 +02:00
c0766ce8ea STYLE: consistent '// End namespace' markers 2018-04-27 09:51:35 +02:00
497dde2b2f CONFIG: bump API version number to 1804 to account for bitSet
- since PackedBoolList is now a compatibility typedef for bitSet,
  it is useful to have an additional means of distinction.

STYLE: simplify internal version tests and compiler defines.

- the API version is now conveyed via the OPENFOAM define directly.
  The older OPENFOAM_PLUS define is provided for existing code.
2018-04-26 09:28:42 +02:00
bac943e6fc ENH: new bitSet class and improved PackedList class (closes #751)
- The bitSet class replaces the old PackedBoolList class.
  The redesign provides better block-wise access and reduced method
  calls. This helps both in cases where the bitSet may be relatively
  sparse, and in cases where advantage of contiguous operations can be
  made. This makes it easier to work with a bitSet as top-level object.

  In addition to the previously available count() method to determine
  if a bitSet is being used, now have simpler queries:

    - all()  - true if all bits in the addressable range are empty
    - any()  - true if any bits are set at all.
    - none() - true if no bits are set.

  These are faster than count() and allow early termination.

  The new test() method tests the value of a single bit position and
  returns a bool without any ambiguity caused by the return type
  (like the get() method), nor the const/non-const access (like
  operator[] has). The name corresponds to what std::bitset uses.

  The new find_first(), find_last(), find_next() methods provide a faster
  means of searching for bits that are set.

  This can be especially useful when using a bitSet to control an
  conditional:

  OLD (with macro):

      forAll(selected, celli)
      {
          if (selected[celli])
          {
              sumVol += mesh_.cellVolumes()[celli];
          }
      }

  NEW (with const_iterator):

      for (const label celli : selected)
      {
          sumVol += mesh_.cellVolumes()[celli];
      }

      or manually

      for
      (
          label celli = selected.find_first();
          celli != -1;
          celli = selected.find_next()
      )
      {
          sumVol += mesh_.cellVolumes()[celli];
      }

- When marking up contiguous parts of a bitset, an interval can be
  represented more efficiently as a labelRange of start/size.
  For example,

  OLD:

      if (isA<processorPolyPatch>(pp))
      {
          forAll(pp, i)
          {
              ignoreFaces.set(i);
          }
      }

  NEW:

      if (isA<processorPolyPatch>(pp))
      {
          ignoreFaces.set(pp.range());
      }
2018-03-07 11:21:48 +01:00
5af5bfa1a5 ENH: error handling for Ragel STL parsing
- also simplify parsing by accepting any case on keywords.
  This implies that something like "sOlId", "SoLiD" will also
  be accepted. Although nobody should really count on this rather
  generous behaviour, it does simplfy the state machine even further.
2018-04-24 09:15:50 +02:00
a230e8d408 STYLE: Correcting typos 2018-03-28 17:14:16 +01:00
ea71484efa ENH: add alternative STL ASCII parsers
- In addition to the traditional Flex-based parser, added a Ragel-based
  parser and a handwritten one.

  Some representative timings for reading 5874387 points (1958129 tris):

      Flex   Ragel   Manual
      5.2s   4.8s    6.7s         total reading time
      3.8s   3.4s    5.3s         without point merging
2018-04-16 10:20:45 +02:00
5d1fb23555 ENH: code reduction in PackedList, PackedBoolList (issue #751)
- eliminate iterators from PackedList since they were unused, had
  lower performance than direct access and added unneeded complexity.

- eliminate auto-vivify for the PackedList '[] operator.
  The set() method provides any required auto-vivification and
  removing this ability from the '[]' operator allows for a lower
  when accessing the values. Replaced the previous cascade of iterators
  with simpler reference class.

PackedBoolList:

- (temporarily) eliminate logic and addition operators since
  these contained partially unclear semantics.

- the new test() method tests the value of a single bit position and
  returns a bool without any ambiguity caused by the return type
  (like the get() method), nor the const/non-const access (like
  operator[] has). The name corresponds to what std::bitset uses.

- more consistent use of PackedBoolList test(), set(), unset() methods
  for fewer operation and clearer code. Eg,

      if (list.test(index)) ...    |  if (list[index]) ...
      if (!list.test(index)) ...   |  if (list[index] == 0u) ...
      list.set(index);             |  list[index] = 1u;
      list.unset(index);           |  list[index] = 0u;

- deleted the operator=(const labelUList&) and replaced with a setMany()
  method for more clarity about the intended operation and to avoid any
  potential inadvertent behaviour.
2018-03-13 08:32:40 +01:00
3d608bf06a ENH: remove reliance on the Xfer class (issue #639)
This class is largely a pre-C++11 holdover. It is now possible to
simply use move construct/assignment directly.

In a few rare cases (eg, polyMesh::resetPrimitives) it has been
replaced by an autoPtr.
2018-03-05 13:28:53 +01:00
806b668418 STYLE: two-parameter Foam::name replaced by word::printf (issue #724)
- reduces some ambiguity and clarifies the expected output and
  behaviour.

STYLE: reduce some automatic conversions of char to string
2018-02-08 12:00:54 +01:00
1b9aec2a3d CONP: suppress register warnings for clang only 2018-01-30 06:49:32 +01:00
e13f8a38a9 COMP: suppress warning about deprecated register keyword (Flex) 2018-01-29 09:13:28 +01:00
3ef8906a66 ENH: consolidate surfaceFormats for reading/writing triSurface (issue #294)
- eliminates previous code duplication and improves maintainability
2017-11-20 14:55:36 +01:00
d49929b210 ENH: improvements to stringOps format and split functions
- split now optionally retains empty substrings.
  Added split on fixed field width.

- Foam::name() now formats directly into string buffer, which a
  removes one layer of copying and also avoids using a non-constexpr
  in the temporary.

STYLE: explicit type narrowing on zero-padded output for ensight
2017-11-23 20:17:33 +01:00
416a3790ea STYLE: prefer autoPtr::reset() to autoPtr::set()
- in most cases already checked valid() so don't need additional check
  for setting an existing pointer
2017-11-22 19:11:11 +01:00
d65ca495d3 STYLE: minor changes in comments 2017-11-22 10:52:42 +01:00
7c1d8cb146 STYLE: more consistent use of labelUList and labelUIndList typedefs 2017-11-19 09:27:47 +01:00
8730a7622a ENH: enumerations for known cell models in cellModel, ptr/ref lookups
- this provides a better typesafe means of locating predefined cell
  models than relying on strings. The lookup is now ptr() or ref()
  directly. The lookup functions behave like on-demand singletons when
  loading "etc/cellModels".

  Functionality is now located entirely in cellModel but a forwarding
  version of cellModeller is provided for API (but not ABI) compatibility
  with older existing user code.

STYLE: use constexpr for cellMatcher constants
2017-11-18 11:05:05 +01:00
85877cb0f4 ENH: coordSet - added protection for the 'distance' option 2017-09-15 11:17:06 +01:00
accebc74ee ENH: improve consistency in parsing primitives from strings (issue #590)
- Any trailing whitespace when parsing from strings or character buffers
  is ignored rather than being treated as an error. This is consistent
  with behaviour when reading from an Istream and with leading whitespace
  being ignored in the underlying atof/atod, strtof/strtod... functions.

- Allow parsing directly from a std::string instead of just from a 'char*'.
  This reflects the C++11 addition of std::stod to complement the C
  functions strtod. This also makes it easier to parse string directly
  without using an IStringStream.

- Two-parameter parsing methods return success/failure.
  Eg,

      if (readInt32(str, &int32Val)) ...

- One-parameter parsing methods return the value on success or
  emit a FatalIOError.
  Eg,

      const char* buf;
      int32Val = readInt32(buf, &);

- Improved consistency when parsing unsigned ints.
  Use strtoimax and strtoumax throughout.

- Rename readDoubleScalar -> readDouble, readFloatScalar -> readFloat.
  Using the primitive name directly instead of the Foam typedef for
  better consistency with readInt32 etc.

- Clean/improve parseNasScalar.
  Handle normal numbers directly, reduce some operations.
2017-09-18 10:47:07 +02:00
2a586dcbe2 Merge remote-tracking branch 'origin/master' into develop 2017-09-15 11:20:35 +02:00
071dfb36fd BUG: parse issues for nastran long format (closes #589) 2017-09-15 10:40:55 +02:00
e70fc61660 ENH: consolidate, cleanup some string methods
- consolidate word::validated() into word::validate() and also allow
  as short form for string::validate<word>(). Also less confusing than
  having similarly named methods that essentially do the same thing.

- more consistent const access when iterating over strings

- add valid(char) for keyType and wordRe
2017-08-02 12:33:35 +02:00
2c69b7d7c4 STYLE: adjust some line lengths, doxygen comments 2017-07-20 13:50:35 +02:00
86ef9e86dc ENH: make treatment of stream allocators more uniform (issue #532)
- use allocator class to wrap the stream pointers instead of passing
  them into ISstream, OSstream and using a dynamic cast to delete
  then. This is especially important if we will have a bidirectional
  stream (can't delete twice!).

STYLE:

- file stream constructors with std::string (C++11)

- for rewind, explicit about in|out direction. This is not currently
  important, but avoids surprises with any future bidirectional access.

- combined string streams in StringStream.H header.
  Similar to <sstream> include that has both input and output string
  streams.
2017-07-17 15:14:38 +02:00
bc1f2fa97e STYLE: use auto and cfind to simplify selector usage (issue #512) 2017-07-03 10:36:03 +02:00
f55c568f13 ENH: upgrade from NamedEnum to Enum (issue #515) 2017-07-03 21:43:33 +02:00
80d69c27b1 COMP: compilation with WM_SP
- STLpoint.H
- isoAdvection.C
- checkMesh/writeFields.C

STYLE: drop construct STLpoint(Istream&), since it doesn't make much sense

- No use case for reading via an OpenFOAM stream and tokenizer.
  Should always be parsing ASCII or reading binary directly.
2017-06-26 17:11:46 +02:00
8221111245 STYLE: pass legacy nCmpt as int 2017-06-13 23:59:11 +02:00
cde12ad9e5 ENH: consolidate vtk classes into 'Foam::vtk' namespace
- elminate the foamVtkFormatter operator() in favour of xmlAttr.
  Improves readability and the purpose is clearer.
2017-06-13 14:10:07 +02:00
a2e978d43e ENH: add VTP, VTU output for most vtk writers (insitu only)
- with the xml append format it is possible to write raw binary
  (instead of base64), but the writer becomes more complicated.
  Either needs two passes to create, or need to allocate a block
  of space for the header information (like VTK itself does) and
  write later.

    * internalWriter
    * patchWriter
    * surfaceMeshWriter
    * lagrangianWriter

 Also these special purpose ones:
    * foamVtkWriteSurfFields
2017-06-01 18:28:40 +02:00
c4f1349496 ENH: construct VTK writers with the outputOptions and adjust internally
- this shifts responsibility away from caller to the individual writers
  for knowing which file formats are supported and which file ending is
  appropriate. When the writer receives the output format request,
  it can elect to downgrade or otherwise adjust it to what it can
  actually manage (eg, legacy vs xml vs xml-append).

  But currently still just with legacy format backends.
2017-05-31 22:08:54 +02:00
03944c2a26 ENH: support enumerations for vtk xml file tags and some legacy text elements 2017-05-30 10:34:01 +02:00