Commit Graph

831 Commits

Author SHA1 Message Date
c35bcc05f4 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-06-27 23:22:54 +01:00
efb39a8790 ENH: (further) Doxygen documentation updates for module support 2016-06-27 20:34:19 +01:00
8ba70962b2 Merge branch '3rdparty-updates' into 'develop'
3rdparty updates



See merge request !49
2016-06-24 10:09:19 +01:00
a8b0552338 Merge branch 'feature-profiling' into 'develop'
high-level profiling/timing functionality



See merge request !47
2016-06-22 14:46:50 +01:00
37bf28c249 STYLE: rename Profiling -> profiling 2016-06-20 21:20:31 +02:00
e86d3f2e0e ENH: add preliminary profiling items into snappyHexMesh
- needs more refinement, but provides the general idea.
2016-06-18 01:00:55 +02:00
9e84deeb09 STYLE: Updated template code 2016-06-17 14:11:59 +01:00
97943ed819 COMP: improve robustness and warning messages when building paraview plugins 2016-06-17 09:31:41 +02:00
42519734c7 ENH: snappyHexMeshDict: improved comment 2016-06-01 12:52:09 +01:00
b9313ef2fe ENH: Consistency updates after Foundation merge and code tidying 2016-04-25 16:46:56 +01:00
fd9d801e2d GIT: Initial commit after latest foundation merge 2016-04-25 11:40:48 +01:00
8c6fa81eba vector::zero -> Zero 2016-04-16 18:34:41 +01:00
a9b8bb13e0 applications/.*/Allwmake: Updated to support "stop on 1st error"
Patch contributed by Bruno Santos
Resolved bug-report http://www.openfoam.org/mantisbt/view.php?id=2042
2016-04-04 09:03:40 +01:00
88bd912374 Pstream: optimisation of data exchange
Contributed by Mattijs Janssens.

1. Any non-blocking data exchange needs to know in advance the sizes to
   receive so it can size the buffer.  For "halo" exchanges this is not
   a problem since the sizes are known in advance but or all other data
   exchanges these sizes need to be exchanged in advance.

   This was previously done by having all processors send the sizes of data to
   send to the master and send it back such that all processors
   - had the same information
   - all could work out who was sending what to where and hence what needed to
     be received.

   This is now changed such that we only send the size to the
   destination processor (instead of to all as previously). This means
   that
   - the list of sizes to send is now of size nProcs v.s. nProcs*nProcs before
   - we cut out the route to the master and back by using a native MPI
     call

   It causes a small change to the API of exchange and PstreamBuffers -
   they now return the sizes of the local buffers only (a labelList) and
   not the sizes of the buffers on all processors (labelListList)

2. Reversing the order of the way in which the sending is done when
   scattering information from the master processor to the other
   processors. This is done in a tree like fashion. Each processor has a
   set of processors to receive from/ send to. When receiving it will
   first receive from the processors with the least amount of
   sub-processors (i.e. the ones which return first). When sending it
   needs to do the opposite: start sending to the processor with the
   most amount of sub-tree since this is the critical path.
2016-04-02 18:32:11 +01:00
142920de9c ENH: snappyHexMeshDict: added documentation for keepPatches 2016-03-23 15:13:03 +00:00
cb65ba71d7 Made all template declarations consistent using 'class' rather than 'typename' 2016-03-22 15:02:55 +00:00
ea6eac35a6 etc/config.sh/CGAL: updated
Patch contributed by Bruno Santos:
 - "etc/config.sh/CGAL":
   - Indented the contents of the recently added if block.
   - Added comment about using system versions.
   - Library paths are now only added if the respective version is not "boost-system" and "cgal-system".

 - "src/renumber/Allwmake":
   It now relies on the previous file to get the version for
   Boost (the same way as in "makeCGAL"). This is so that it will also
   build "SloanRenumber" if "boost_version" is set to "boost-system".

 - "applications/utilities/mesh/generation/Allwmake":
   It now also relies on the script "config.sh/CGAL" to get the
   version for CGAL. If "cgal_version" is set to "cgal-system", it
   will now also build "foamy*Mesh" utilities and respective
   libraries.

Resolves report http://www.openfoam.org/mantisbt/view.php?id=1232
2016-03-22 07:58:38 +00:00
ffa7dc7d6b ENH: IOWarningIn: use new ..InFunction macros 2016-03-09 14:36:25 +00:00
2bbc844ea0 Rationalize the autoMesh library: autoHexMesh -> snappyHexMesh
autoRefine -> snappyRefine
autoLayer -> snappyLayer
autoSnap -> snappySnap
2016-03-01 16:21:31 +00:00
eb5d349242 Rationalize the autoMesh library: autoMesh -> snappyHexMesh 2016-03-01 16:01:42 +00:00
5db3116a74 src/OpenFOAM: Moved function documentation comments into .H files and removed duplicates 2016-03-01 12:29:01 +00:00
7ba41e0095 Removed duplicate, inconsistent and spurious comments in .C files 2016-02-29 18:33:54 +00:00
cd852be3da OpenFOAM: Updated all libraries, solvers and utilities to use the new const-safe tmp
The deprecated non-const tmp functionality is now on the compiler switch
NON_CONST_TMP which can be enabled by adding -DNON_CONST_TMP to EXE_INC
in the Make/options file.  However, it is recommended to upgrade all
code to the new safer tmp by using the '.ref()' member function rather
than the non-const '()' dereference operator when non-const access to
the temporary object is required.

Please report any problems on Mantis.

Henry G. Weller
CFD Direct.
2016-02-26 17:31:28 +00:00
350d03246e scripts: Reformat with consistent section separators 2016-02-15 18:30:24 +00:00
34d2890952 foamyHexMeshBackgroundMesh: Updated to compile 2016-02-03 21:24:38 +00:00
472fa0674a Update headers 2016-02-02 20:09:58 +00:00
8b9698ad43 processorPolyPatch, processorCyclicPolyPatch: Rationalized the construction of the patch name
This change ensures that these patches are named consistently so that
they can be looked-up as required in e.g. patchMeanVelocityForce
2016-02-02 20:07:16 +00:00
9e3ce4ec7f Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus into feature-shared-file
Conflicts:
	applications/utilities/mesh/advanced/refinementLevel/refinementLevel.C
	applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/initialPointsMethod/pointFile/pointFile.C
	applications/utilities/miscellaneous/foamHelp/helpTypes/helpBoundary/helpBoundary.C
	applications/utilities/postProcessing/graphics/PV3Readers/PV3FoamReader/vtkPV3Foam/vtkPV3FoamUpdateInfo.C
	applications/utilities/postProcessing/graphics/PV4Readers/PV4FoamReader/vtkPV4Foam/vtkPV4FoamUpdateInfo.C
	applications/utilities/postProcessing/turbulence/createTurbulenceFields/createTurbulenceFields.C
	applications/utilities/postProcessing/velocityField/Co/Co.C
	applications/utilities/postProcessing/velocityField/Pe/Pe.C
	applications/utilities/preProcessing/applyBoundaryLayer/applyBoundaryLayer.C
	applications/utilities/preProcessing/changeDictionary/changeDictionary.C
	applications/utilities/preProcessing/setFields/setFields.C
	applications/utilities/surface/surfaceMeshConvert/surfaceMeshConvert.C
	applications/utilities/surface/surfaceMeshExport/surfaceMeshExport.C
	applications/utilities/surface/surfaceMeshImport/surfaceMeshImport.C
	applications/utilities/surface/surfaceRedistributePar/surfaceRedistributePar.C
	src/OpenFOAM/db/IOobject/IOobject.C
	src/OpenFOAM/db/IOobjects/CompactIOList/CompactIOList.C
	src/OpenFOAM/db/IOobjects/IOField/IOField.C
	src/OpenFOAM/db/IOobjects/IOList/IOList.C
	src/OpenFOAM/db/IOobjects/IOPtrList/IOPtrList.C
	src/OpenFOAM/db/IOobjects/IOdictionary/IOdictionary.C
	src/OpenFOAM/db/Time/findInstance.C
	src/OpenFOAM/db/regIOobject/regIOobject.C
	src/OpenFOAM/db/regIOobject/regIOobjectI.H
	src/OpenFOAM/db/regIOobject/regIOobjectRead.C
	src/OpenFOAM/db/regIOobject/regIOobjectWrite.C
	src/OpenFOAM/meshes/polyMesh/mapPolyMesh/mapDistribute/IOmapDistribute.C
	src/OpenFOAM/meshes/polyMesh/polyBoundaryMesh/polyBoundaryMesh.C
	src/OpenFOAM/meshes/polyMesh/zones/ZoneMesh/ZoneMesh.C
	src/dynamicMesh/fvMeshDistribute/IOmapDistributePolyMesh.C
	src/dynamicMesh/motionSolver/componentDisplacement/componentDisplacementMotionSolver.C
	src/dynamicMesh/polyTopoChange/polyTopoChange/hexRef8/hexRef8Data.C
	src/dynamicMesh/polyTopoChange/polyTopoChange/hexRef8/refinementHistory.C
	src/dynamicMesh/polyTopoChange/polyTopoChanger/polyTopoChanger.C
	src/edgeMesh/edgeMeshFormats/edgeMesh/edgeMeshFormat.C
	src/edgeMesh/extendedEdgeMesh/extendedEdgeMeshFormats/extendedEdgeMeshFormat/extendedEdgeMeshFormat.C
	src/edgeMesh/extendedEdgeMesh/extendedFeatureEdgeMesh/extendedFeatureEdgeMesh.C
	src/fvMotionSolver/fvMotionSolvers/displacement/interpolation/displacementInterpolationMotionSolver.C
	src/fvMotionSolver/pointPatchFields/derived/uniformInterpolatedDisplacement/uniformInterpolatedDisplacementPointPatchVectorField.C
	src/lagrangian/basic/Cloud/CloudIO.C
	src/meshTools/sets/cellSources/fieldToCell/fieldToCell.C
	src/postProcessing/foamCalcFunctions/basic/addSubtract/addSubtract.C
	src/postProcessing/functionObjects/field/fieldCoordinateSystemTransform/fieldCoordinateSystemTransformTemplates.C
	src/postProcessing/functionObjects/field/readFields/readFieldsTemplates.C
	src/thermophysicalModels/radiation/radiationModels/fvDOM/radiativeIntensityRay/radiativeIntensityRay.C
	src/triSurface/triSurface/surfacePatch/surfacePatchIOList.C
2016-01-25 16:29:04 +00:00
e424059208 ENH: glboal file handling: initial commit
Moved file path handling to regIOobject and made it type specific so
now every object can have its own rules. Examples:
- faceZones are now processor local (and don't search up anymore)
- timeStampMaster is now no longer hardcoded inside IOdictionary
  (e.g. uniformDimensionedFields support it as well)
- the distributedTriSurfaceMesh is properly processor-local; no need
  for fileModificationChecking manipulation.
2016-01-25 13:03:15 +00:00
59b578f155 Provide consistency in assignment operators
Always return void to avoid various bugs associated with automatic
type conversion.

Resolves request http://openfoam.org/mantisbt/view.php?id=1973
2016-01-17 18:56:28 +00:00
56fa7c0906 Update code to use the simpler C++11 template syntax removing spaces between closing ">"s 2016-01-10 22:41:16 +00:00
f0c3e8d599 STYLE: Updated version to 'plus' 2015-12-22 23:14:17 +00:00
8864223aed ENH: copyright: make consistent with OpenFOAM-history 2015-12-19 14:22:30 +00:00
4a8abe78f5 Merge branch 'feature_shm_zoning' into develop
Conflicts:
	src/mesh/autoMesh/autoHexMesh/autoHexMeshDriver/refinementParameters/refinementParameters.C
	src/mesh/autoMesh/autoHexMesh/meshRefinement/meshRefinement.H
	src/mesh/autoMesh/autoHexMesh/meshRefinement/meshRefinementBaffles.C
2015-12-15 20:10:10 +00:00
97f58f1ea3 ENH: snappyHexMesh: fix behaviour of allowFreeStandingZoneBaffles
See comment in $FOAM_UTILITIES snappyHexMeshDict
2015-12-15 17:36:45 +00:00
9d94d2e836 BUG: foamyHexMesh: force construct-from-components for pointField 2015-12-14 17:44:11 +00:00
2c6558ec20 ENH: snappyHexMeshDict: added comment for limitRegions 2015-12-14 14:34:32 +00:00
ff56809375 ENH: autoHexMesh: allow location-in-mesh to be made into a cellZone
Normally the location-in-mesh is equivalent to a cellZone -1. This can
now be overridden by a surface-specified cellZone as before.
2015-12-10 11:50:42 +00:00
5c9dff6146 GIT: Resolved conflict 2015-12-09 16:19:28 +00:00
8837a89237 STYLE: Updated links from openfoam.org to openfoam.com 2015-12-09 15:03:05 +00:00
eafd5a3850 ENH: Updated Info, Warning and Error messages 2015-12-08 11:15:39 +00:00
3f55f752fc GIT: Resolve conflict with upstream merge from Foundation 2015-12-07 17:07:20 +00:00
633e2b1255 Minor updates to aid porting to FreeBSD
Based on patches provided by Jason Bacon
2015-12-02 18:18:06 +00:00
f0bc2d9faa ENH: parallel: added -decomposeParDict option to
- foamyHexMesh
- snappyHexMesh
- decomposePar
2015-11-24 17:35:18 +00:00
f3787e5722 ENH: offsetSurface: new extrusion model to extrude inbetween two surfaces 2015-11-24 13:46:48 +00:00
930a87a74e ENH: fvMotionSolvers: updated comment, renamed function 2015-11-23 11:52:28 +00:00
8f5997bb6a ENH: displacementMotionSolver: additional hierarchy
- shm: have displacementMotionSolver as alternative mesh shrinker
  (instead of medialAxis).
- updated iglooWithFridges tutorial to use displacementLaplacian
- selectable interpolation from cells to points in the motion solvers
  using the 'interpolation' keyword:
    interpolation volPointInterpolation;    // default
    or
    interpolation patchCorrected (lowerWall upperWall);
- wrapped up mesh shrinkers (see above) for use as a displacementMotionSolver
  (i.e. the opposite of the displacementMotionSolver mesh shrinker)
2015-11-19 09:35:20 +00:00
e2ef006b91 applications: Update ...ErrorIn -> ...ErrorInFunction
Avoids the clutter and maintenance effort associated with providing the
function signature string.
2015-11-10 17:53:31 +00:00
42fb1b9e8e Updated notImplemented -> NotImplemented
The new NotImplemented macro uses __PRETTY_FUNCTION__ for GNU compatible
compilers otherwise __func__ to provide the function name string.
2015-11-01 10:26:37 +00:00
8342cdc6ee Documentation: Use '-' rather than '+' for lists for Doxygen 2015-10-29 22:41:34 +00:00