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@ -44,7 +44,7 @@ When referring to individual atoms, they may be indexed by their local
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containing first all *owned* atoms (index < `Atom::nlocal`) and then all
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*ghost* atoms. The order of atoms in these arrays can change due to
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atoms migrating between between subdomains, atoms being added or
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deleted, or atoms being sorted for better cach efficiency. Atoms are
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deleted, or atoms being sorted for better cache efficiency. Atoms are
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globally uniquely identified by their *atom ID*. There may be multiple
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atoms with the same atom ID present, but only one of them may be an
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*owned* atom.
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@ -79,7 +79,7 @@ Atom class versus AtomVec classes
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The `Atom` class contains all kinds of flags and counters about atoms in
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the system and that includes pointers to **all** per-atom properties
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availabel for atoms. However, only a subset of these pointers are
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available for atoms. However, only a subset of these pointers are
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non-NULL and which those are depends on the atom style. For each atom
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style there is a corresponding `AtomVecXXX` class derived from the
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`AtomVec` base class, where the XXX indicates the atom style. This
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@ -31,7 +31,7 @@ The :doc:`fix bond/break <fix_bond_break>` and :doc:`fix bond/react
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<fix_bond_react>` commands allow breaking of bonds within a molecular
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topology with may also define angles, dihedrals, etc. These commands
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update internal topology data structures to remove broken bonds, as
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well as the appropriate angle, dihederal, etc interactions which
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well as the appropriate angle, dihedral, etc interactions which
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include the bond. They also trigger a rebuild of the neighbor list
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when this occurs, to turn on the appropriate pairwise forces.
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@ -561,7 +561,7 @@ The *sort* keyword determines whether the host or device performs atom
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sorting, see the :doc:`atom_modify sort <atom_modify>` command. The
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value options for the *sort* keyword are *no* or *device* similar to the
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*comm* keywords above. If a value of *host* is used it will be
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automatically be changed to *no* since the *sort* keyword doesn't
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automatically be changed to *no* since the *sort* keyword does not
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support *host* mode. The value of *no* will also always be used when
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running on the CPU, i.e. setting the value to *device* will have no
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effect if the simulation is running on the CPU. Not all fix styles with
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