Commit Graph

35750 Commits

Author SHA1 Message Date
0cd95d64e2 Merge pull request #3768 from jrgissing/fix_reaxff/species-variable_Nlimit
reax/species: variable input for Nlimit keyword
2023-05-06 11:15:48 -04:00
b9161843dc more robust variable error checks 2023-05-05 17:41:42 -04:00
b3130a2878 Merge pull request #3763 from akohlmey/collected-small-fixes
Collected small changes and fixes
2023-05-04 20:13:46 -04:00
0b71371597 reax/species: variable input for Nlimit keyword 2023-05-04 20:10:13 -04:00
8fe4394ada spelling 2023-05-04 16:04:08 -04:00
042829c40d Start document about per-atom properties and atom data access 2023-05-04 15:57:11 -04:00
40f7c90474 correct underline 2023-05-04 15:56:31 -04:00
a0d9854e11 more thorough tests and PBC handling for compute stress/cartesian 2023-05-04 03:46:18 -04:00
de45437cc9 apply clang-format 2023-05-04 03:32:59 -04:00
b61e06a40f must initialize fp to avoid crash in destructor 2023-05-04 03:32:39 -04:00
42e090d945 replace tabs and remove trailing whitespace 2023-05-04 02:21:55 -04:00
62858115b2 offset positions so bin indices are >= 0 even for positions < 0 2023-05-03 07:36:27 -04:00
2542a7e840 avoid integer overflow 2023-05-03 00:39:59 -04:00
89d59fad61 Merge branch 'develop' into collected-small-fixes 2023-05-02 20:47:33 -04:00
8054923941 Merge pull request #3761 from lammps/count-types
New compute count/type command
2023-05-02 20:44:55 -04:00
db38d99f3c Merge pull request #3758 from stanmoore1/kk_fuse
Fuse some Kokkos kernels to reduce launch latency for small systems
2023-05-02 20:36:48 -04:00
25bc0bd365 Merge pull request #3762 from akohlmey/phana-cmake-build
Update phonon tool (phana) and add CMake support
2023-05-02 19:49:17 -04:00
81523b7ba3 Merge branch 'patch-2' of github.com:srtee/lammps into collected-small-fixes 2023-05-02 17:42:02 -04:00
7ab30aa468 add versionadded tag 2023-05-02 17:32:57 -04:00
3e3ed89f33 avoid out-of-range access if an angle/dihedral/improper type is set to 0 2023-05-02 17:30:23 -04:00
a8dcb3987a silence compiler warning 2023-05-02 17:29:06 -04:00
7b5fecfad7 make phana installation in LAMMPS compatible with ubuntu 18.04LTS 2023-05-02 17:24:38 -04:00
36632e3356 Clarifying how BPM package works 2023-05-02 14:28:17 -06:00
6d050374c3 fix compilation with -DLAMMPS_BIGBIG 2023-05-02 16:24:43 -04:00
3f8cd4577c update unit test 2023-05-02 16:20:29 -04:00
b6e211dd62 consistently declare variables when used only 2023-05-02 16:20:20 -04:00
e8a77c61ac whitespace 2023-05-02 16:19:53 -04:00
3119434932 apply clang-format 2023-05-02 15:59:34 -04:00
8a9091595d Revert "use more obvious representation of 2^53"
This reverts commit ff29ef7d31
as it conflicts with how MSVC interprets 1L (it would require
1LL which creates issues with other compilers).
2023-05-02 15:56:45 -04:00
22eb09ee0f sunc with GHub version 2023-05-02 13:44:04 -06:00
aa4447413a expand to angles, dihedrals, impropers 2023-05-02 13:39:37 -06:00
fdf9288e52 Merge branch 'develop' into kk_fuse 2023-05-02 10:11:55 -06:00
d13096e08b improve error message 2023-05-02 12:08:55 -04:00
8ca1e2d417 add OpenMP suppression for GNU 13 compilers 2023-05-02 11:50:15 -04:00
c5e4f7c5fd modernize 2023-05-02 11:49:55 -04:00
d2bb1b420d simplify and cleanup 2023-05-02 11:49:13 -04:00
eacb420e21 whitespace 2023-05-02 10:34:36 -04:00
12135bac77 add unit tests for compute count/type 2023-05-02 10:22:37 -04:00
56f791eec2 avoid uninitialized data access for scalar data 2023-05-01 23:52:35 -04:00
c8d5b9e4d0 avoid uninitialized pointers 2023-05-01 23:52:04 -04:00
ba747e5544 suppress bogus warnings with gcc 13.0 and later 2023-05-01 21:10:18 -04:00
ff29ef7d31 use more obvious representation of 2^53 2023-05-01 20:57:32 -04:00
b38544a9e8 apply clang-format 2023-05-01 20:43:05 -04:00
73b8bb8617 fix bug that breaks compilation with -DLAMMPS_BIGBIG 2023-05-01 20:41:44 -04:00
a2b74c8466 small doc update 2023-05-01 20:23:13 -04:00
39a77064e0 update so it can be built either standalone or as subdir with LAMMPS 2023-05-01 20:14:52 -04:00
478058119b integrate CMake build procedure for tools/phonon 2023-05-01 20:14:52 -04:00
d1f64c02d8 show/explain alternate LJ potential using the minimum energy distance 2023-05-01 20:13:37 -04:00
53848be081 improve error messages 2023-05-01 19:55:14 -04:00
41a0196874 Merge pull request #3740 from stanmoore1/kk_sort
Add Kokkos support for atom sorting on device
2023-05-01 19:54:00 -04:00