Commit Graph

32965 Commits

Author SHA1 Message Date
73bf0334e4 Fixed optional parameters in find_pair_neighlist 2022-10-28 20:53:46 -05:00
55dafc110d Unit tests and some off-by-one errors 2022-10-28 19:09:31 -05:00
7a10cf2b53 Missing colon in gather_atoms_subset doc 2022-10-28 07:57:33 -05:00
624e230f4d several bugs fixed; unit tests updated 2022-10-28 00:51:04 -05:00
dfef232ccb Fixed omission in gather_bonds example (docs) 2022-10-27 19:09:53 -05:00
0b83b8c533 Changed case of intrinsics to match style elsewhere 2022-10-27 18:26:22 -05:00
67c165afb2 Fixed typo in gather_bonds example 2022-10-27 18:23:20 -05:00
3545b491ee Merge branch 'lammps:develop' into fortran-expansion 2022-10-27 14:15:47 -05:00
1e29c83be3 Merge branch 'fortran-expansion' of github.com:hammondkd/lammps into fortran-expansion 2022-10-27 14:12:38 -05:00
4216ca604c Refactored copying of strings from C to Fortran to avoid duplication 2022-10-27 14:12:26 -05:00
850a303f34 Merge pull request #3500 from akohlmey/cmake-openmp-modernize
Modernize OpenMP detection and checks in CMake
2022-10-27 00:09:13 -04:00
336ec056de use googletest aliased targets consistently 2022-10-26 22:37:24 -04:00
0d47dc250a drop special OpenMP flags from presets. Will be detected by FindOpenMP. 2022-10-26 22:37:04 -04:00
6afa1d14d2 downgrade KOKKOS OpenMP check to version 3.1
need to apply special exception for NVHPC/PGI compilers
2022-10-26 22:36:15 -04:00
ca6aba52bb modernize OpenMP detection and check for omp.h in CMake 2022-10-26 22:35:41 -04:00
cdbf475c00 Merge pull request #3491 from mehdibghk/new-pair_style-ylz
New pair style ylz
2022-10-26 15:40:41 -04:00
71c8806764 reformat, spelling, whitespace fixes. address minor grammar and content issues 2022-10-26 05:18:06 -04:00
d487d8af37 Update in.flat_membrane
shape updated to 1 0.99 0.99
2022-10-26 05:01:17 -04:00
371c2d7cbb Pair ylz docs enhancements 2022-10-26 05:00:25 -04:00
b8781aca15 Implemented plugin_name and plugin_count and their docs 2022-10-26 00:02:54 -05:00
19f93009c1 Implemented and documented has_id, id_count, and id_name 2022-10-25 19:51:08 -05:00
e68efc039f Resolved merging conflicts in three files 2022-10-25 14:37:33 -05:00
8c5ebb3942 Edit to make auto-merging easier 2022-10-25 08:34:48 -05:00
dfaff2dc9a Pre-emptive edits to ease auto-merging 2022-10-25 08:30:21 -05:00
4c176e5afc whitespace 2022-10-24 19:54:43 -04:00
fc59d7d3ca update LAMMPS developer contact info 2022-10-24 18:28:12 -04:00
34d70dd753 Merge branch 'develop' into new-pair_style-ylz 2022-10-24 18:27:24 -04:00
2b8d6fc4d9 Merge pull request #3485 from akohlmey/collected-small-changes
Collected small changes and fixes
2022-10-24 18:23:52 -04:00
d313179917 add compatibility to VTK version 9.0 and above 2022-10-24 16:25:10 -04:00
248b7383c7 Merge remote-tracking branch 'github/develop' into collected-small-changes
# Conflicts:
#	src/DIPOLE/pair_lj_cut_dipole_long.h
#	src/OPENMP/fix_nvt_sllod_omp.h
#	src/PHONON/fix_phonon.h
#	src/SPIN/pair_spin_dipole_cut.h
#	src/SPIN/pair_spin_dipole_long.h
#	src/STUBS/mpi.h
#	src/UEF/fix_nh_uef.h
#	src/fix_nvt_sllod.h
#	tools/coding_standard/homepage.py
2022-10-24 15:50:50 -04:00
0146a19ed3 silence unrecognized pragma warnings 2022-10-24 15:42:17 -04:00
27b37ebad0 Merge pull request #3495 from akohlmey/update-email
Update contact email address in LAMMPS sources
2022-10-24 13:49:31 -04:00
3fe18c70ad Merge pull request #3497 from jrgissing/bond/react-create_atoms_error_check
Bond/react: create atoms error check
2022-10-24 13:17:28 -04:00
ffa0460ca0 Merge branch 'lammps:develop' into fortran-expansion 2022-10-24 11:53:19 -05:00
463ff1499c Added reminder to fortran/lammps.f90 in sync with tools/swig/lammps.i 2022-10-24 11:52:51 -05:00
2132b1d904 update developer reference text 2022-10-24 11:08:26 -04:00
a7d55526e8 update developer info 2022-10-24 11:06:32 -04:00
3c4b0a0c04 expand homepage checker tool to check a few more folders and apply updates 2022-10-24 10:58:39 -04:00
43bd7cfaf4 Merge pull request #3498 from schererc/develop
Update pair_threebody_table.cpp
2022-10-24 10:24:45 -04:00
b939ea55f6 allow -kokkos on g 0 without GPU support, report GPUs only if ngpu > 0 2022-10-24 05:05:49 -04:00
785b46e57b Implemented lmp_gather_bonds, lmp_find_*_neighlist, lmp_neighlist_num_elements, and their unit tests and documentation 2022-10-24 01:00:48 -05:00
1e2ffe6cb7 must bootstrap centos 7 from dockerhub now 2022-10-22 22:58:16 -04:00
7aea2b8840 update Plumed download to version 2.8.1 2022-10-22 22:57:53 -04:00
2aa1dfa6d6 replace one more suffix 2022-10-22 22:28:12 -04:00
cd621e74f5 it is safer to do a >= comparison instead of == for floating point numbers 2022-10-22 15:03:37 -04:00
94627b3ef7 remove redundant curly braces 2022-10-22 14:54:53 -04:00
b96028eaf2 Update pair_threebody_table.cpp
Correcting for hard coded ntheta = 79 in the extreme case that theta is exactly equal to 180.0 degrees.
2022-10-22 16:38:37 +02:00
01a0cb35a3 modernize calls to access the list of fixes in the Modify class 2022-10-22 08:20:16 -04:00
43e3dc7a9e use inline insertion sort for short array 2022-10-22 08:10:00 -04:00
d038b049c9 avoid superfluous calls to utils::strdup and improve error messages 2022-10-22 08:09:23 -04:00