Commit Graph

32822 Commits

Author SHA1 Message Date
5da63b1e1d Merge branch 'develop' into feature/pace-al 2022-09-27 14:01:58 -04:00
7fe9d087db move reusable fortran modules to keep data to a separate file 2022-09-27 14:01:01 -04:00
256f385be4 avoid race condition 2022-09-27 13:20:39 -04:00
36d22b9d00 silence compiler warnings 2022-09-27 13:20:25 -04:00
2f231bcd50 update documentation: explain fix_modify pair every N 2022-09-27 17:15:20 +02:00
502fd0eff8 ML-PACE.cmake: update tag and MD5 hashsum
pair_pace_extrapolation.cpp: add log message about type of active set (LINEAR or FULL)
2022-09-27 17:04:16 +02:00
2072e08624 added get_last_error_message; still working on its unit test 2022-09-26 21:56:03 -05:00
3e9dca3017 Implement alternate and recommended way to set properties of abstract base class
See: https://github.com/lammps/lammps/security/code-scanning/476
2022-09-26 21:01:22 -04:00
7238a29cb7 improve version tag regexp to match cases with leading blanks 2022-09-26 20:39:46 -04:00
0fe739eb35 Merge branch 'develop' into collected-small-changes
# Conflicts:
#	doc/utils/sphinx-config/false_positives.txt
2022-09-26 20:34:37 -04:00
be98b5a168 Merge pull request #3458 from Boogie3D/mliappy_unified
MLIAP Unified Interface
2022-09-26 20:33:17 -04:00
1dc3c8fc26 remove hippynn examples 2022-09-26 19:56:00 -04:00
10068a0fde Merge pull request #3461 from julient31/llg-correction
Correction of some LL features in the SPIN package
2022-09-26 14:56:36 -04:00
1eb3d50c22 simplify/modernize 2022-09-26 13:38:35 -04:00
5ea37448b6 whitespace 2022-09-26 13:12:04 -04:00
a4796dd872 Merge pull request #3396 from hammondkd/fortran-tinkering
Expanding the Fortran interface
2022-09-26 13:02:30 -04:00
a4e92ed4a9 update broken URLs 2022-09-26 12:09:45 -04:00
543e7b8b56 format DOI tags consistently 2022-09-26 11:41:22 -04:00
6262f3c537 improve error message 2022-09-26 10:23:15 -04:00
1072a5bda2 Added unit test for has_error 2022-09-26 09:21:41 -05:00
28d84b4fcb Missed wrap_extract_compute.cpp in prior commit 2022-09-26 08:57:32 -05:00
7cd5d7b357 Added lammps_has_error 2022-09-26 08:57:03 -05:00
30ddb2d4b4 Merge branch 'clean-master2' of github.com:julient31/lammps into llg-correction 2022-09-26 07:53:09 +02:00
e24b4bec01 Adding a new test problem for large damping in the LL equation. 2022-09-26 07:49:51 +02:00
ac6cb062e6 Completing the correction in fix langevin/spin. 2022-09-26 07:44:32 +02:00
90f26f05fc Correcting some aspects of the SPIN package documentation. 2022-09-26 07:43:19 +02:00
bada1fb348 Finished extract_compute and its unit tests and documentation 2022-09-25 23:54:18 -05:00
d34d5139cb use CMakeLists.txt file that ships with PACE library
this sets the necessary define so that the compilation hack is no longer needed
2022-09-25 17:55:11 -04:00
cb92a1553c improve error messages 2022-09-25 17:45:18 -04:00
ccafdf54fd Merge branch 'feature/pace-al' of https://github.com/yury-lysogorskiy/lammps into feature_pace-al 2022-09-25 17:13:37 -04:00
a6f8ea32a7 reformat docs and fix spelling issues 2022-09-25 17:10:50 -04:00
d205d4a6df remove docs for unexisting command compute pace/extrapolation 2022-09-25 17:10:49 -04:00
fc830d1397 restore original ML-PACE CMake code and update for new dependencies 2022-09-25 17:10:49 -04:00
ca6733c345 remove unused lines 2022-09-25 17:10:49 -04:00
23b15ac4ca temporarily comment out code that breaks compilation 2022-09-25 17:10:44 -04:00
e1bc3a4ade apply clang-format 2022-09-25 16:02:56 -04:00
2e3fc4c054 Merge branch 'develop' into feature/pace-al 2022-09-25 16:01:48 -04:00
e38d7cf192 update explanations for version updates in security policy file 2022-09-25 10:43:59 -04:00
af3da50bda add some more versionadded tags, now mostly complete for 2022 2022-09-25 09:41:55 -04:00
971f5672c9 add missing sllod initialization fixes 2022-09-25 07:11:25 -04:00
67a210e6d8 no need to include pair.h 2022-09-25 06:41:51 -04:00
084024cdc3 format 2022-09-25 06:41:37 -04:00
51624fa78d whitespace 2022-09-25 03:55:45 -04:00
3a95a7b973 add utility to detect pending version tags in .. versionadded/changed:: 2022-09-25 03:51:54 -04:00
64b88f2e13 add versionadded/versionchanged markers for features from 15Sep2022 and 3Aug2022 2022-09-25 03:20:29 -04:00
7b7237bdaf try to suppress creating __pycache__ folders in the python source dirs 2022-09-24 22:27:22 -04:00
19a0747aeb add unit test for MLIAP unified 2022-09-24 22:15:29 -04:00
ebf69f2e79 avoid incorrect results with ghostneigh_flag on by skipping contributions from non-local i atoms 2022-09-24 21:09:27 -04:00
0ed0d757ec refactor unified LJ example input to embed the python code into the input 2022-09-24 21:08:43 -04:00
59ca352e48 whitespace 2022-09-24 15:34:41 -04:00