Commit Graph

32822 Commits

Author SHA1 Message Date
c16f40eb7c don't enable OpenMP together with CUDA for KOKKOS by default 2022-05-18 12:23:38 -04:00
acbeae075a no need to suppress nvcc warnings about pragmas with Clang as host compiler 2022-05-18 12:17:06 -04:00
2b51a92231 error check for per-atom eng/virial request 2022-05-18 10:13:56 -06:00
df2ecf5bf8 timings, energy, virial tallying 2022-05-18 08:49:31 -06:00
4f45ae2ef6 improve support for intel compilers on windows 2022-05-18 09:14:18 -04:00
5559491d7b add missing overrides 2022-05-18 09:13:52 -04:00
ba0efbef31 include presets for intel compiler names on windows 2022-05-18 09:13:37 -04:00
7646592f05 recognize the new LLVM based intel compiler as intel compiler 2022-05-18 08:54:26 -04:00
02908f0468 modernize MKL FFT interface 2022-05-18 08:42:40 -04:00
6475d4b956 Skip Fortran unittests if no Fortran MPI support is found 2022-05-18 07:16:16 -04:00
d54f97736e whitespace 2022-05-18 06:32:52 -04:00
1466620750 update googletest to the latest github commit 2022-05-18 06:09:42 -04:00
baa48946e5 add comment to please CodeQL 2022-05-18 00:56:10 -04:00
e7b9d03573 crank up epsilon for tip4p/cut styles some more 2022-05-18 00:28:42 -04:00
d8b37601a8 Merge pull request #3262 from akohlmey/collected-small-changes
Collected small changes and fixes
2022-05-18 00:11:05 -04:00
d94bcd043b enforce using a single thread with Kokkos and SNAP or PACE 2022-05-17 23:42:24 -04:00
15a727a7ff avoid segfaults with Kokkos threads 2022-05-17 23:41:46 -04:00
e94275391c Merge branch 'develop' into collected-small-changes 2022-05-17 22:10:15 -04:00
935c9a02d7 Merge pull request #3267 from athomps/born-rotated
Added Python wrapper that handles rotations to and from LAMMPS frame
2022-05-17 19:52:52 -04:00
55e0af930b Merge pull request #3269 from yury-lysogorskiy/master
Update ML-PACE installation to v.2021.10.25.fix version
2022-05-17 19:50:49 -04:00
dbcc08ba00 more refactoring for memory usage 2022-05-17 16:26:53 -06:00
a5171beacd make lammps-shell test compatible with MULTI-CONFIG CMake builders 2022-05-17 18:26:27 -04:00
72209b0617 Merge pull request #3258 from akohlmey/create-atoms-mesh
Create atoms from STL mesh
2022-05-17 18:11:41 -04:00
899764c00c Merge pull request #3268 from akohlmey/update-kappa-example
Update KAPPA example
2022-05-17 17:18:45 -04:00
cebbd471cf tweak unit test epsilon for portability to MacOS /w ARM 2022-05-17 17:15:42 -04:00
8ffe2a206c Update ML-PACE installation to v.2021.10.25.fix version 2022-05-17 22:41:43 +02:00
e07b46c771 refactoring edits 2022-05-17 14:40:09 -06:00
f9efa426a7 Merge pull request #3256 from lammps/delete-atoms-exact
Delete atoms exactly by fraction or count
2022-05-17 16:25:21 -04:00
ae979aca4e consistently use prefactor instead of pre-factor (the former was more common) 2022-05-17 16:20:10 -04:00
38d7fcee92 correct and update create_atoms mesh documentation 2022-05-17 16:16:32 -04:00
e7d072c593 add sanity check on radscale value, set radius also for quasi-random mode 2022-05-17 16:15:46 -04:00
510e78d4d3 test scripts 2022-05-17 12:44:11 -06:00
d487ab10e2 doc page and unittest tweaks 2022-05-17 12:00:40 -06:00
853e3ae99b fix typo and clarify error message 2022-05-17 13:52:29 -04:00
dbb3e75f24 change partial to random 2022-05-17 11:02:42 -06:00
fe4782696e silence compiler warnings 2022-05-17 06:03:01 -04:00
326b833d7f (temporarily) disable Kokkos deprecation warnings in CMake presets in preparation for stable release 2022-05-17 06:02:50 -04:00
bf98df3264 silence compiler warnings 2022-05-16 23:20:04 -04:00
df40732343 Make cast to double explicit 2022-05-16 15:00:13 -04:00
d32885fbe3 Fix compiler warnings 2022-05-16 14:48:02 -04:00
659fd82a9e Fix compiler warnings 2022-05-16 14:35:24 -04:00
db2d5b863d Improved MPI portability and added reference log files 2022-05-16 08:22:45 -06:00
ee8a8b6cd0 Added Python wrapper that handles rotations to and from LAMMPS frame 2022-05-15 17:43:18 -06:00
b1ba616470 update KAPPA example for current code, to use thermo_modify colname, and compute kappa in input 2022-05-15 18:58:50 -04:00
44f3ad5620 update singularity image descriptions for newer versions of cuda and rocm 2022-05-15 08:11:50 -04:00
c0e5a03989 update tests for delete_atoms 2022-05-15 01:56:59 -04:00
f62363516c streamline the refactored interface for delete_atoms partial some more 2022-05-15 01:56:45 -04:00
8e6b0425f7 apply clang-format 2022-05-14 18:01:34 -04:00
a79814793e improve handling of hybrid styles and their arguments and errors 2022-05-14 17:56:44 -04:00
1f30d3f140 programming style 2022-05-14 17:56:12 -04:00