Commit Graph

23236 Commits

Author SHA1 Message Date
c82df186b5 Disable zstd tests if library is too old 2020-09-16 15:18:28 -04:00
ccc743e13e Add test for thermo data 2020-09-16 15:14:05 -04:00
8ccd3c03fa Correct test name 2020-09-16 12:54:36 -04:00
2270d8f4ec Add PyLammps.atoms test and fix bug with -echo screen/both 2020-09-16 12:48:20 -04:00
9cdd35e625 Make sure Python tests run unbuffered so PyLammps works 2020-09-16 11:28:38 -04:00
ca24806f4c Add tests 2020-09-16 10:11:00 -04:00
38f0a2e24c Fix doc build errors 2020-09-15 19:50:28 -04:00
7611efeea2 Update python docs 2020-09-15 18:03:26 -04:00
60712e3f90 Add docstrings 2020-09-15 16:22:43 -04:00
556dc67fdc Correct filename of generated image 2020-09-15 15:20:38 -04:00
6cfad41be4 Add background_color argument to IPyLammps.image 2020-09-15 15:19:39 -04:00
e5e449795a Add tests for has_style and available_styles 2020-09-15 15:16:19 -04:00
9490370eb0 Use consistent naming in PyLAMMPS classes 2020-09-15 12:22:36 -04:00
2c30de65d2 Fix typos in docstring 2020-09-15 12:16:47 -04:00
db59abf1b9 fix bug in lammps_has_style() 2020-09-15 11:34:24 -04:00
4a48ce76b8 Merge remote-tracking branch 'origin/master' into python_interface_guide 2020-09-15 11:34:16 -04:00
c6bc21febf Merge pull request #2361 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2020-09-15 11:28:25 -04:00
2f3c73217b detect if dt has been changed from default and print warning if reset by units command 2020-09-15 10:50:44 -04:00
b20b234ebe Merge remote-tracking branch 'origin/master' into python_interface_guide 2020-09-15 10:45:28 -04:00
df9f0e244b add false positive 2020-09-14 17:18:14 -04:00
5634dd4394 correct formatting of examples 2020-09-14 17:15:53 -04:00
f70717710e fix for zstd support. add styles to list at top and document .zst extension requirement 2020-09-14 17:07:09 -04:00
50b80e078d Merge pull request #2354 from stanmoore1/qeq_refactor
small fix qeq/reax refactoring for base and accelerated variants
2020-09-14 12:18:32 -04:00
a5740d75cf add missing option 2020-09-14 09:27:49 -04:00
3655919c7c tweak minimize summary output format 2020-09-14 09:09:22 -04:00
b702298e83 fix typo 2020-09-12 19:06:58 -04:00
da0cdb0de4 update formatting of keyword summary 2020-09-12 19:06:30 -04:00
eda04dac98 update conventions and guidelines about C++ standard and requirements 2020-09-12 15:13:23 -04:00
69962b4de5 add test for MSM kspace without periodic boundaries 2020-09-12 11:10:38 -04:00
3368eb79d8 fix issue with local variable shadowing a global variable 2020-09-12 11:10:12 -04:00
d7500c3e5a MSM output format tweaks 2020-09-12 11:09:33 -04:00
16d2fef5ad add check that shrinkwrap boundaries are not use when reading a data file while a MSM kspace style is defined 2020-09-12 11:06:20 -04:00
4a8d6016e4 Update docs 2020-09-11 22:49:44 -06:00
bc1b876a3d make fix widom errors and test output consistent with the fix name capitalization 2020-09-11 19:29:17 -04:00
612f1d7ce3 fix typo 2020-09-11 17:49:06 -04:00
7b869e8ee8 Start with more detailed description of PyLammps 2020-09-11 17:09:38 -04:00
77d475d121 Add more tests 2020-09-11 15:48:23 -04:00
58833ce11e Add API tests 2020-09-11 15:21:36 -04:00
cb253b2b1a Add HTML report option for Python 2020-09-11 14:03:13 -04:00
1855f92694 Use include and omit 2020-09-11 12:44:41 -04:00
377163d940 Add target to generate Python coverage XML 2020-09-11 11:36:22 -04:00
101d39142e Merge pull request #2357 from akohlmey/lib-get-mpi-comm
Add ability to retrieve the MPI communicator from LAMMPS instance via library/python interface
2020-09-11 11:20:12 -04:00
97000fa016 Merge remote-tracking branch 'origin/master' into python_interface_guide 2020-09-11 09:48:28 -04:00
ded57ba749 move test to avoid issues with indentation from having tabs follow directly a list-table 2020-09-10 16:16:58 -04:00
4452109b60 address spelling issue 2020-09-10 16:15:03 -04:00
0d5f68bc30 make "new in" and "changed in" leads boldface 2020-09-10 16:14:53 -04:00
3d37fd05f4 disable caching - for now - to avoid bad side effects from sphinx-tabs 2020-09-10 16:14:18 -04:00
e813e2d30a add minimal unit test for lammps_get_mpi_comm() API 2020-09-09 22:12:47 -04:00
bd72ef7996 add API to library/python interface to extract the MPI communicator 2020-09-09 22:03:11 -04:00
cdd9d693ad Merge pull request #2349 from akohlmey/more-progguide-updates
More Programmer docs updates and related code refactoring
2020-09-09 14:34:41 -04:00