Commit Graph

3785 Commits

Author SHA1 Message Date
e62e34f0f0 ENH: add -cellZone option to foamToVTK 2017-07-04 14:16:18 +02:00
6dd5a5f35f BUG: foamToVTK -cellSet produces rubbish or segfault (closes #516)
- erroneous double logic for subset meshes.

  The underlying vtk::vtuCells uses a cellMap to map into a global
  field, which also allows handling of decomposed polyhedral cells.

  If a mesh subset is involved (eg, cellSet, cellZone), then the
  set/zone cellMap can be used to ensure that the original number is
  properly adjusted. For foamToVTK, the meshSubsetHelper already
  does the subsetting and is used when loading fields.

  Does not affect ParaView reader module since there we work on the
  full field and do the subsetting manually (using the cellMap).
2017-07-04 13:19:16 +02:00
c5bd5393df ENH: lazier field loading in foamToVTK
- avoid loading surface fields if there are no faceZones

- avoid pointMesh if there are no appropriate point fields
2017-07-04 11:57:54 +02:00
bc1f2fa97e STYLE: use auto and cfind to simplify selector usage (issue #512) 2017-07-03 10:36:03 +02:00
c50368ecc6 ENH: add trapFpe and setNaN optimisationSwitch (issue #517)
- allows configuration without an environment variable.
  For compatibility still respect FOAM_SIGFPE and FOAM_SETNAN
  env-variables

- The env-variables are now treated as true/false switch values.
  Previously there was just a check for env exists or not, but this
  can be fairly fragile for a user's environment.
2017-07-05 17:49:37 +02:00
6a0a8b99b3 STYLE: use ""_deg user-literal for degrees to radians conversion
ENH: add degToRad() multiplier (useful for scalar fields)

- use degToRad() functions throughout instead of scattered local solutions
2017-07-04 15:36:46 +02:00
f55c568f13 ENH: upgrade from NamedEnum to Enum (issue #515) 2017-07-03 21:43:33 +02:00
1bcb454f6d STYLE: hash constructors with power-of-two
- use 1024 instead of 1000 since it will be changed internally to 1024 anyhow.
2017-07-05 10:46:50 +02:00
aefb739584 STYLE: fix permissions on files, remove unused files 2017-07-03 12:15:41 +02:00
7ac55ac74a ENH: consolidate arch and version strings (issue #513)
- make some IOobject writing routines non-templated.

- relocate more IOobject methods into the IOobjectI.H
  (generally cleanup the main header).
2017-07-03 13:24:08 +02:00
80d69c27b1 COMP: compilation with WM_SP
- STLpoint.H
- isoAdvection.C
- checkMesh/writeFields.C

STYLE: drop construct STLpoint(Istream&), since it doesn't make much sense

- No use case for reading via an OpenFOAM stream and tokenizer.
  Should always be parsing ASCII or reading binary directly.
2017-06-26 17:11:46 +02:00
02edc5b206 STYLE: tabs and line length in files, very dubious NULL in ensight reader.
- disable automatically upgrading copyrights in files since changes to
  not automatically imply a change in copyright. Eg, fixing a typo in
  comments, or changing a variable from 'loopI' to 'loopi' etc.
2017-06-26 13:43:05 +02:00
c0b38033ea ENH: integration of lumpedPointMotion
- This provides a mechanism for moving mesh patches based on external
  input (eg, from an external structures solver). The patch points are
  influenced by the position and rotation of the lumped points.

  BC:  lumpedPointDisplacementPointPatchVectorField

  Controlling mechanisms:
  - externalCoupler
    for coordinating the master/slave

  - lumpedPointMovement
    manages the patch-points motion, but also for extracting forces/moments

  - lumpedPointState
    represents the positions/rotations of the controlling points

  Utils:
  - lumpedPointZones
    diagnostic for visualizing the correspondence between controlling
    points and patch faces

  - lumpedPointMovement
    Test that the patch motion is as desired without invoking moveMesh.
    With the -slave option, return items from a precalculated table
    for the lumpedPointDisplacementPointPatchVectorField BC.
2017-06-23 14:43:09 +01:00
6ecddbe4a5 STYLE: use #includeEtc in tutorial cases
#includeEtc "caseDicts/setConstraintTypes"
 vs.
    #include "${WM_PROJECT_DIR}/etc/caseDicts/setConstraintTypes"
2017-06-21 16:42:57 +01:00
c73865de87 Merge branch 'integration-isoadvector' into 'develop'
INT: Integration of isoAdvector and supporting material

See merge request !119
2017-06-21 17:22:26 +01:00
a6ef8b9027 INT: Integration of isoAdvector and supporting material
Community contribution from Johan Roenby, DHI

IsoAdvector is a geometric Volume-of-Fluid method for advection of a
sharp interface between two incompressible fluids. It works on both
structured and unstructured meshes with no requirements on cell shapes.
IsoAdvector is as an alternative choice for the interface compression
treatment with the MULES limiter implemented in the interFoam family
of solvers.

The isoAdvector concept and code was developed at DHI and was funded
by a Sapere Aude postdoc grant to Johan Roenby from The Danish Council
for Independent Research | Technology and Production Sciences (Grant-ID:
DFF - 1337-00118B - FTP).
Co-funding is also provided by the GTS grant to DHI from the Danish
Agency for Science, Technology and Innovation.

The ideas behind and performance of the isoAdvector scheme is
documented in:

    Roenby J, Bredmose H, Jasak H. 2016 A computational method for sharp
    interface  advection. R. Soc. open sci. 3: 160405.
    [http://dx.doi.org/10.1098/rsos.160405](http://dx.doi.org/10.1098/rsos.160405)

Videos showing isoAdvector's performance with a number of standard
test cases can be found in this youtube channel:

    https://www.youtube.com/channel/UCt6Idpv4C8TTgz1iUX0prAA

Project contributors:

* Johan Roenby <jro@dhigroup.com> (Inventor and main developer)
* Hrvoje Jasak <hrvoje.jasak@fsb.hr> (Consistent treatment of
  boundary faces including processor boundaries, parallelisation,
  code clean up
* Henrik Bredmose <hbre@dtu.dk> (Assisted in the conceptual
  development)
* Vuko Vukcevic <vuko.vukcevic@fsb.hr> (Code review, profiling,
  porting to foam-extend, bug fixing, testing)
* Tomislav Maric <tomislav@sourceflux.de> (Source file
  rearrangement)
* Andy Heather <a.heather@opencfd.co.uk> (Integration into OpenFOAM
  for v1706 release)

See the integration repository below to see the full set of changes
implemented for release into OpenFOAM v1706

    https://develop.openfoam.com/Community/Integration-isoAdvector
2017-06-20 14:36:15 +01:00
bea9063bd3 COMP: writeVTK: label64 compilation 2017-06-15 12:31:37 +01:00
b5f091e74f BUG: incorrect indexing for surface baffles (fixes #497) 2017-06-16 09:37:43 +02:00
2d530401fd ENH: add foamToVTK -name option
- as per foamToEnsight, foamToEnsightParts.
  Allows the user to specify different output directories.
2017-06-14 08:14:24 +02:00
7ee1dba43a STYLE: adjust feedback comments in foamToVTK 2017-06-13 22:28:39 +02:00
cde12ad9e5 ENH: consolidate vtk classes into 'Foam::vtk' namespace
- elminate the foamVtkFormatter operator() in favour of xmlAttr.
  Improves readability and the purpose is clearer.
2017-06-13 14:10:07 +02:00
4cbbe3fd59 ENH: add VTP output support for surfMesh
- use proxy writer for triSurface writing
2017-06-02 12:07:43 +02:00
a2e978d43e ENH: add VTP, VTU output for most vtk writers (insitu only)
- with the xml append format it is possible to write raw binary
  (instead of base64), but the writer becomes more complicated.
  Either needs two passes to create, or need to allocate a block
  of space for the header information (like VTK itself does) and
  write later.

    * internalWriter
    * patchWriter
    * surfaceMeshWriter
    * lagrangianWriter

 Also these special purpose ones:
    * foamVtkWriteSurfFields
2017-06-01 18:28:40 +02:00
c4f1349496 ENH: construct VTK writers with the outputOptions and adjust internally
- this shifts responsibility away from caller to the individual writers
  for knowing which file formats are supported and which file ending is
  appropriate. When the writer receives the output format request,
  it can elect to downgrade or otherwise adjust it to what it can
  actually manage (eg, legacy vs xml vs xml-append).

  But currently still just with legacy format backends.
2017-05-31 22:08:54 +02:00
a42c35f64b ENH: paraview reader module with internal caching of the vtk geometries
- The reader module allows two levels of caching.
  The OpenFOAM fvMesh can be cached in memory, for faster loading of
  fields. Additionally, the translated VTK geometries are held in a
  local cache. The cached VTK geometries should incur no additional
  overhead since they use the VTK reference counting for their storage
  management.
2017-05-24 17:12:49 +02:00
96d98cd2de ENH: paraFoam --help => immediate pass-through to paraview --help
ENH: Paraview modules.

- Update props with int, not bool (for more versatility)
- Set properties and tool-tips directly on widgets instead of buttons
2017-05-23 08:02:25 +02:00
2495fcb42e ENH: replace foamToVTK routines with library-level equivalents 2017-05-22 16:13:53 +02:00
8a66ec9975 ENH: replace paraview vtk conversion with library utilities
- this allows filling in the VTK structures without intermediate data
  and without sequencial insertion. Should be faster and smaller
  than the previous cell-wise insertion methods.
  Most importantly, it improves code reuse.
2017-05-15 13:01:38 +02:00
1f18a0f97f ENH: replace internal meshmaps with foamVtkMeshMaps 2017-05-15 12:57:36 +02:00
2f288cfbef ENH: first pv reader version with delayed assembly of output blocks
- this greatly simplifies data management and opens the possibility of
  reusing converted vtk meshes instead of converting each time.
2017-05-15 02:06:53 +02:00
cf5ebd82db ENH: improve internal bookkeeping in paraview readers
- has the selected values directly and use these lookup names to store
  directly into a hash. This replaces several parallel lists of
  decomp information etc and makes it easier.
2017-05-14 21:42:59 +02:00
09f0cfd5c7 STYLE: reduce number of small methods in paraview reader
- improves the overview of the code
2017-05-14 21:38:15 +02:00
48bf71dd26 STYLE: avoid VTK InsertNextPoint if we already know the sizes
- avoids potentially issues if we reusing a vtkPoints array,
  and should be marginally faster without the additional
  range checking.
2017-05-14 21:24:06 +02:00
2e0337d024 ENH: use smart pointers for paraview readers
- adds flexiblity and reduces risk of memory leaks as we add/change
  features

STYLE: adjust naming for paraview internal polyDecomp
2017-05-14 21:04:11 +02:00
71710e0798 ENH: use prefix when displaying group,patch names for paraview selection
- easier to detect the implicit grouping
2017-05-12 15:37:04 +02:00
e5cdee5dd9 STYLE: use labelRange and range-based-for in paraview readers
- also use updated forAll* macros
2017-05-12 15:36:44 +02:00
418ebe4a87 ENH: replace writeFuncs in setSet with foamVtk library utilities 2017-05-19 12:28:13 +02:00
49500b0194 STYLE: more meaningful variable name when using meshSubsetHelper 2017-06-14 07:56:57 +02:00
fd665b4a3c ENH: overset: Initial release of overset capability.
Adds overset discretisation to selected physics:
- diffusion : overLaplacianDyMFoam
- incompressible steady : overSimpleFoam
- incompressible transient : overPimpleDyMFoam
- compressible transient: overRhoPimpleDyMFoam
- two-phase VOF: overInterDyMFoam

The overset method chosen is a parallel, fully implicit implementation
whereby the interpolation (from donor to acceptor) is inserted as an
adapted discretisation on the donor cells, such that the resulting matrix
can be solved using the standard linear solvers.

Above solvers come with a set of tutorials, showing how to create and set-up
simple simulations from scratch.
2017-06-14 09:51:02 +01:00
523008e85d STYLE: corrected file vs fileName for CSV files 2017-06-13 07:23:32 +02:00
0ea219adf5 TUT: consistent writeCompression option
- Use on/off vs longer compressed/uncompressed.
  For consistency, replaced yes/no with on/off.

- Avoid the combination of binary/compressed,
  which is disallowed and provokes a warning anyhow
2017-06-13 06:50:16 +02:00
d27d69e3f7 reconstructParMesh: Use tree method to improve speed and scaling
Based on development contributed by Paul Edwards, Intel.

Conflicts:
	applications/utilities/parallelProcessing/reconstructParMesh/reconstructParMesh.C
2017-05-09 09:32:25 +01:00
b36491576d COMP: foamList - removed corruption error on exit 2017-06-08 16:14:51 +01:00
c187e9b523 ENH: foamHelp - minro refactoring to enable use of foamHelp -help option 2017-06-08 16:07:58 +01:00
a4b826aa1e STYLE: fix comments 2017-06-01 16:38:48 +02:00
b80f24948d Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2017-06-01 17:28:21 +01:00
6a0b35bdc8 ENH: noiseModels - updated parallel usage (no longer needs proc dirs) and apply input data validation 2017-06-01 17:27:30 +01:00
b312f0ba40 ENH: documentation and input simplification for surfaceFeatureExtract 2017-06-01 15:46:42 +02:00
dfafe6075a ENH: region-wise self intersection for surfaceFeatureExtract (issue #450) 2017-05-29 18:57:25 +02:00
6e72ceddd0 Merge branch 'enh-iter-cleanup' into 'develop'
Further hash table iter clean-up

See merge request !113
2017-05-19 12:44:05 +01:00