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1445 Commits

Author SHA1 Message Date
2c778ce54e STYLE: Tutorial - updated keyword 2016-12-23 14:20:30 +00:00
79ee563e32 BUG: pointNoise model - avoid double read 2016-12-23 14:18:18 +00:00
89517146b2 BUG: pressure FO - create new tmp to avoid db clash 2016-12-23 14:17:39 +00:00
b8f328c7f2 STYLE: Header updates 2016-12-23 11:15:32 +00:00
58b6fae81a BUG: Corrected logFiles usage for parallel running; doc updates. Fixes #366 2016-12-23 10:30:29 +00:00
13395c17f4 STYLE: Corrected fieldNames -> fields. Fixes #365 2016-12-23 09:12:36 +00:00
8701c57ecb BUG: Removed call to topoChanging(false) in interDyMFoam and compressibleInterDyMFoam - see #363 and 03db8627 2016-12-23 09:09:30 +00:00
81d958c5df STYLE: Updated README.md 2016-12-23 09:08:01 +00:00
b04305bb43 ENH: add small tool for listing the available EXE targets (based on git grep)
Example use

    foamGrepExeTargets           > targets-available
    foamGrepExeTargets -appbin   > targets-created

    diff -uw targets-available targets-created
2016-12-23 09:13:44 +01:00
195a37cdb5 STYLE: avoid specifying the path to 'date' (issue #364)
- this is apparently not uniform across systems

STYLE: unify the date format in logfile
2016-12-23 08:03:09 +01:00
ed20508db0 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-22 09:32:33 -08:00
03db86279c ENH: setting topoChanging flag to false if there are no topo changes in polyTopoChanger::update.
This reset the flag from any previous topo changes
2016-12-22 09:30:09 -08:00
d2fc56d6be STYLE: added note about limitation of the ccm conversion 2016-12-22 17:44:21 +01:00
608bb5d83b COMP: update lnInclude directories when building (issue #364)
- Could be related to interrupted builds.
  So if there are any parts of the build that rely on an explicit
  'wmakeLnInclude', make sure that the contents are properly updated.

--

ENH: improved feedback from top-level Allwmake

- Report which section (libraries, applications) is being built.

- Provide final summary of date, version, etc, which can be helpful
  for later diagnosis or record keeping.

- The -log=XXX option for Allwmake now accepts a directory name
  and automatically appends an appropriate log name.
  Eg,
      ./Allwmake -log=logs/  ->> logs/log.linux64GccDPInt32Opt

  The default name is built from the value of WM_OPTIONS.

--

BUG: shell not exiting properly in combination with -log option

- the use of 'tee' causes the shell to hang around.
  Added an explicit exit to catch this.

--

- Detecting the '-k' (-non-stop) option at the top-level Allwmake, which
  may improve robustness.

- Explicit continue-on-error for foamyMesh (as optional component)

- unify format of script messages for better readability

COMP: reduce warnings when building Pstream (old-style casts in openmpi)
2016-12-22 11:26:29 +01:00
5f811ac09d STYLE: confusing wm32, wm64 aliases (issue #364)
- wm32/wm64 were for changing between -m32, -m64 builds on x86_64
  architectures. This is seldom enough not to warrant a special alias.
  Also ambiguous if these could refer to label sizes.

- Remove wm32,wm64 aliases.
- Add wmInt32, wmInt64 aliases for switching WM_LABEL_SIZE.
2016-12-22 11:49:46 +01:00
f4adb1f189 DOC: update BuildIssues
- can compile with icc 17.0.1
- note the min gcc versions needed to compile clang
2016-12-22 09:15:13 +01:00
3fc66cb710 ENH: make resetOnRestart optional for valueAverage (issue #360)
ENH: ensure averaging flags are not 'sticky' (see issue #331)
2016-12-22 13:00:05 +01:00
9e645179ad BUG: fluxSummary - updated constructor for writeFile. Fixes #362 2016-12-22 10:34:36 +00:00
02ba3a2d44 ENH: InjectedParticleDistributionInjection model - added protection for the case of zero particles; updated tutorial scripts. See #363 2016-12-22 10:30:15 +00:00
c3df4b9368 BUG: Tutorial updates - updated rhoSimpleFoam thermo to use rhoThermo after commit a7c8d1c - see #355 2016-12-22 10:14:34 +00:00
40e0fb2eac ENH: Field function objects using fieldExpression - tidied outpu. See #359 2016-12-22 10:09:12 +00:00
33f2559a98 ENH: relativeMotion: new tutorial demonstrating relative motion 2016-12-21 13:40:32 +00:00
0211b0a43b STYLE: correct the documented input names in header files (fixes #360) 2016-12-21 12:15:03 +01:00
33811401d6 ENH: blendingFactor function object - suppress warning and correct docs. Fixes #359 2016-12-21 08:12:46 +00:00
a807d1e18e STYLE: Minor code formatting 2016-12-20 23:07:16 +00:00
af434646d3 Adding flux to Make/files. And updating scalarTransport header instructions
scalarTransport does not generate its own phiMean anymore but it is given from the user.
This "flux" can be generated using the "flux" FO
2016-12-20 12:27:36 -08:00
fa32677e7a ENh: Adding flux FO 2016-12-20 12:26:47 -08:00
8d65da5b5c ENH: Adding parallel running for compressibleDyInterFoam tutorial 2016-12-20 09:45:52 -08:00
0a5d158991 ENH: scalarTransport function object updates 2016-12-20 17:18:34 +00:00
e0244a74ed Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-20 16:58:34 +00:00
46ce5659b4 STYLE: scalarTransport function object clean-up 2016-12-20 16:54:00 +00:00
484e59aefb Merge branch 'develop' of https://develop.openfoam.com/Development/OpenFOAM-plus into develop 2016-12-20 15:43:51 +01:00
f816c2d0bc COMP: include BuildIssues.txt for known build issues
- fixed library path for VTK.
  They should use lib/ and not lib64/
2016-12-20 15:33:16 +01:00
953594286f BUG: fieldAverage - read state properties using getDict. Fixes #358 2016-12-20 13:09:15 +00:00
0869f832be Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-20 11:17:59 +00:00
6ee70e4b4d BUG: surfaceInterpolate function object - corrected evaluation. Foxes #335 2016-12-20 11:17:51 +00:00
482f8ceeb4 BUG: localMin scheme - was using minMod instead of min 2016-12-20 10:09:11 +00:00
c537e4e8ac ENH: Updated output to use the writer class 2016-12-19 20:38:27 +00:00
5fdb20c35e STYLE: bump min gcc for foamInstallationTest
- cleanup some code in foamInstallationTest
2016-12-19 18:04:12 +01:00
b7d0939482 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-19 14:24:44 +00:00
a529ced473 ENH: Aachen bomb tutorial - added example of particleSistribution function object 2016-12-19 14:24:35 +00:00
75e86eb413 ENH: particleDistribution function object - updated output 2016-12-19 14:17:07 +00:00
ebb2ec504c STYLE: Updated header documentation 2016-12-19 14:16:13 +00:00
23a6cadfa6 BUG: redistributePar: remove inconsistent *ProcAddressing. Fixes #351. 2016-12-19 12:58:49 +00:00
1422c1aa3a BUG: etc: use of wrong variable name 2016-12-19 10:01:31 +00:00
7b4680482e ENH: use string endsWith in a few places
fieldName.endsWith("_0")
vs
    fieldName.size() > 2 && fieldName(fieldName.size()-2, 2) == "_0"
2016-12-18 23:58:45 +01:00
2b14360662 ENH: additional startsWith(), endsWith() string methods
- As the names describe, check if the string starts or ends with a
  particular value. Always true if the given text is empty or if the
  string is identical to the given text.
2016-12-18 23:21:51 +01:00
4d6ac7ddf8 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-18 21:54:38 +00:00
519248d3f4 ENH: fieldExpression - added verbose flag to foundObject 2016-12-18 21:44:25 +00:00
03e1f9c433 ENH: Removed unused files 2016-12-18 21:28:35 +00:00
23dfba2f64 STYLE: Updated header documentation 2016-12-18 21:25:12 +00:00
e379720053 ENH: additional fileName methods
- add an extension to the file name
   - remove a file extension
   - check if a file name has an extension
   - check if a file name has a particular extension (as word),
     or matches a particular grouping of extensions (as wordRe).
2016-12-18 20:40:03 +01:00
b08dadff62 ENH: initializer list constructor for fileName
This slightly more convenient when working with char[] input:

     fileName file1{ "path", "name", "to", "file.ext" };
vs.  fileName file1 = fileName(path)/"name"/"to"/"file.ext";

But is a bit more efficient since it avoid most of the intermediate
copying and resizing incurred by the '/' operator.
2016-12-18 20:09:58 +01:00
f45db9cec9 ENH: argList option to remove the noFunctionObjects option (issue #352) 2016-12-19 20:08:58 +01:00
c2b0531081 ENH: only report the architecture information for binary output files
- not required for ASCII, and makes normal dictionaries too noisy.

STYLE: move archHint to be a file-scope static
2016-12-19 00:24:54 +01:00
6f5cece322 STYLE: documentation for wordRe DETECT vs REGEXP was swapped around
- Use wordRe::REGEXP (not wordRe::DETECT) if the content is known to
  be a regular expression anyhow.
2016-12-18 22:35:20 +01:00
8a11a492f1 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-19 15:42:01 -08:00
a7c8d1cfca ENH: changing rhoSimpleFoam to rhothermo and bounding thermo.rho between minRho and maxRho.
Bounding thermo.rho in rhoPorousSimpleFoam.
Changing initial time step in externalSolarLoad tutorial.
Commenting out momemtun source term in steamInjection which causes problems
2016-12-19 15:39:13 -08:00
7acef189cf ENH: provide machine/OpenFOAM architecture hint in output files (issue #271)
FoamFile
  {
      version     2.0;
      format      binary;
      arch        "LSB;label=32;scalar=64";
      class       vectorField;
      object      points;
  }

There is otherwise no simple indication in any of the files as to the
sizes used (Int32 vs Int64, SP vs DP). This makes it difficult for the
end-user and also for any third-party consumers.

--
The architecture information contains three items in the following format:

    (LSB|MSB);label=(32|64);scalar=(32|64)

- The endian value always appears first, without any leading space.
  This make it trivial to check later. Either the first 3 letters (LSB
  vs MSB) or even just the first letter ('L' vs 'M').

- Subsequent key=value pairs for 'label' and 'scalar' are separated
  by semicolons. The ordering of label vs scalar is not specified.

Note that this 'arch' information is purely informational.
It is currently not used by the OpenFOAM input mechanism itself.
2016-12-18 01:43:58 +01:00
db0d8de756 ENH: Streamline function object - report velocity field being employed - see #323 2016-12-16 20:59:13 +00:00
16f1d748ec BUG: Corrected function object usage documentation. Fixes #349 2016-12-16 20:45:13 +00:00
f41c88000f ENH: Tutorial updates 2016-12-16 20:24:02 +00:00
8b86d8b1b2 BUG: waveMOdels - corrected error introduced in commit 95f3adb1 2016-12-16 20:23:47 +00:00
6e78da0db6 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-16 19:54:52 +00:00
901ee44827 BUG: Re-applying commit e73d2c5d 2016-12-16 19:53:57 +00:00
e50108e428 ENH: adding header description for eddyDissipationModel 2016-12-16 09:56:06 -08:00
b53389edef GIT: Resolved conflict merging master into develop 2016-12-16 17:10:38 +00:00
91f8176a75 STYLE: using messaging macros when referring to function name 2016-12-16 16:56:55 +00:00
4cff9286c8 BUG: corrected Allwclean 2016-12-16 15:04:39 +00:00
ff6e15a136 ENH: Added local Allwclean to ensure wclean cleans all... 2016-12-16 14:40:50 +00:00
06dfbe9b0c ENH: Added local Allwclean to ensure wclean cleans all... 2016-12-16 14:40:50 +00:00
28e37bbec9 STYLE: Consistency updates 2016-12-16 14:36:48 +00:00
a956e0f73a ENH: blendingFactor function object - always include field name in result name 2016-12-16 14:25:58 +00:00
267903077b ENH: interCondensingEvaporatingFoam - updated for postProcess utility; tidying 2016-12-16 13:33:19 +00:00
bd86b155aa Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-16 13:26:39 +00:00
30d8fc3459 ENH: Tutorial updates and clean-up 2016-12-16 13:26:28 +00:00
9b1fcb0f73 ENH: increase coverage for foamConfigurePaths script
- can adjust many more values
2016-12-16 08:17:38 +01:00
3f362fd7ec CONFIG: add config files for VTK, MESA
- sometimes used for off-screen rendering.
  Only add to library-path when they are actually available
2016-12-16 08:17:29 +01:00
ade1cbb40a Merge branch 'bugFix_surfaceCheck' into 'develop'
added optional argument description (Fixes #347)

Optional argument listed.

@andy @mark Could you confirm/merge?

See merge request !90
2016-12-16 07:13:23 +00:00
528881cf47 BUG: missing surfaceCheck -outputThreshold option (fixes #347)
- The value from -outputThreshold was used in the code,
  but the option definition itself was somehow missed.
2016-12-16 05:14:46 +00:00
c3c963bcaf STYLE: Minor typo corrections 2016-12-15 21:18:22 +00:00
af74809786 ENH: increase precision of points for some mesh conversion applications 2016-12-15 21:35:14 +01:00
a32a915d2e BUG: polyMesh removeFiles side-effect for blockMesh viewer (issue #346)
- polyMesh constructor from cell shapes invoked 'removeFiles'.
  This may or may not be what the caller wants or expects.
  With the ParaView blockMesh viewer, this behaviour causes deletion of
  all mesh data (points, faces, etc) when the viewer is refreshed.

  Triggered even when just building the blockMesh topology.

- only a few places that construct a polyMesh from cell shapes
  (mostly mesh conversion utilities).
  Ensure that the file removal (if any) occurs in the application
  and *not* as a side-effect of calling the polyMesh constructor.

--

  blockMesh (application)
    - The placement of the removeFiles seems to also remove freshly
      generated sets (Bug or feature to remove sets?)

  +-----------------------+---------------+------------------+
  | Application           | Constructor   | removeFiles      |
  |                       | (patch info)  | new / existing   |
  +-----------------------+---------------+------------------+
  | blockMesh             | dictionary    | existing         |
  | ansysToFoam           | names         | new              |
  | cfx4ToFoam            | dictionary    | new              |
  | fluentMeshToFoam      | names         | new              |
  | gambitToFoam          | dictionary    | new              |
  | gmshToFoam            | names         | new              |
  | ideasUnvToFoam        | names         | new              |
  | kivaToFoam            | dictionary    | new              |
  | mshToFoam             | names         | new              |
  | netgenNeutralToFoam   | names         | new              |
  | plot3dToFoam          | names         | new              |
  | tetgenToFoam          | names         | new              |
  | vtkUnstructuredToFoam | names         | new              |
  +-----------------------+---------------+------------------+
2016-12-15 19:07:05 +01:00
141dd02477 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-15 17:47:01 +00:00
501ad5a607 ENH: Tutorial script update 2016-12-15 17:46:37 +00:00
2786625fa0 Merge branch 'surfField-sampling' into 'develop'
Surf field sampling

See merge request !87
2016-12-15 17:34:45 +00:00
38e40ffb95 BUG: foamList - removed link against randomProcesses lib. Fixes #343 2016-12-15 16:31:38 +00:00
a80dc41138 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-15 16:28:47 +00:00
7e985a9b7c BUG: tutorial - corrected runTimePostProcessing intput. See #340 2016-12-15 16:28:36 +00:00
9a56896380 Merge branch 'feature-runtime-post-pro-clean-objects' into 'develop'
ENH: runTimePostProcessing - added option to clear/remove objects after use

When specifying line and surface function-object-based visualisation, use the optional `clearObjects` flag to indicate that source objects should be removed/cleared after use.

Test case: [cavity.tgz](/uploads/62cc2761d132f42456f2af08f1499eba/cavity.tgz)

Syntax:

```
    surfaces
    {
        cuttingPlane1
        {
            type            functionObject;
            functionObject  cuttingPlane;
            clearObjects    yes;              // new option
            ...
```

Note: only files that have been used will be removed, e.g. if a function object has created multiple surface files, unused files will remain at the end of the run - in the attached case the p surface remains...

See merge request !89
2016-12-15 15:51:14 +00:00
4ff1c7dca4 ENH: runTimePostProcessing - added option to clear/remove objects after use 2016-12-15 15:45:02 +00:00
500dc5d3a3 DEFEATURE: remove unused fvMesh constructor using cellShapes 2016-12-15 15:48:09 +01:00
83dab87568 ENH: foamList lib updates 2016-12-15 14:26:56 +00:00
78da6865c6 COMP: reduce warnings when building sloan renumber
- boost uses old-style casts for null and others
2016-12-15 15:15:56 +01:00
d5301772f7 Update of interCondensingEvaporatingFoam and its tutorial 2016-12-15 12:36:48 -08:00
6baf1d7d8f Merge branch 'integration-ihcantabria' into 'develop'
Integration of ihcantabria wave models

Integration of functionality produced by The Environmental Hydraulics Institute "IHCantabria" (http://www.ihcantabria.com/en/)

- Original code introduced in commit 95e9467e
- Restructured and updated by OpenCFD into a new `waveModels` library available to the interFoam family of solvers

Main source:
`$FOAM_SRC/waveModels`

Tutorials:
`$FOAM_TUTORIALS/multiphase/interFoam/waveExample*`

Capabilities include:
- Wave generation
- Solitary wave using Boussinesq theory
- Cnoidal wave theory
- StokesI, StokesII, StokesV wave theory
    
- Active wave absorption at the inflow/outflow boundaries based on shallow water theory

IHCantabria Authors:
- Javier Lopez Lara (jav.lopez@unican.es)
- Gabriel Barajas (barajasg@unican.es)
- Inigo Losada (losadai@unican.es)

See merge request !88
2016-12-15 13:38:13 +00:00
10753b77e7 ENH: Code/doc tidying 2016-12-15 13:22:37 +00:00
06900449ab ENH: Removed old wave model integration files 2016-12-15 13:08:15 +00:00
bf9fcba645 ENH: Added waveModels library to interFoam family of solvers 2016-12-15 13:07:00 +00:00
95f3adb1fb ENH: waveModels - moved to main source tree and simplified 2016-12-15 12:45:14 +00:00
5e9d916fd3 CONFIG: add ADIOS configuration information for early adopters
- the configuration settings can be used for the third-party build,
  but the configuration is not yet actively enabled in
  etc/bashrc, etc/cshrc
2016-12-15 13:29:30 +01:00
91b7ede14b STYLE: adjust log name for 'Allwmake -log' (issue #333)
- now defaults to 'log.$WM_OPTIONS' (eg, log.linux64GccDPInt32Opt)
  for more clarity and fewer potential name clashes when building
  multiple versions.
2016-12-15 13:20:21 +01:00
e6f8d27553 ENH: integrate surfField-based fluxSummary
- additional surface and surfaceAndDirection modes
2016-12-15 12:59:35 +01:00
4a845f5c41 ENH: newly structured surface 'sources' for sampling.
- extend the sampling concept to include surfMeshes and surfFields
  for storage.

- Note the createOnRead switch in surfMeshSamplers can be desirable in
  some situations to force creation of the surface faces within the
  constructor.
2016-12-15 09:54:25 +01:00
b073c0a104 ENH: postOperation for surfaceFieldValue
- currently only 'none' or 'sqrt', which can be useful in combination
  with integrate or averaging functions.
2016-12-15 09:46:00 +01:00
001a2e4a37 ENH: add surfField support to various field function objects
- fieldAverage
  - mag
  - magSqr
  - readFields
  - fieldsExpression (add, subtract)
2016-12-15 09:32:53 +01:00
b0433d93f8 ENH: add ZoneMesh names(), sortedNames() methods
- similar to functionality available for IOobjectList, objectRegistry
2016-12-15 00:16:51 +01:00
fcd3f50672 BUG: foamToEnsight faceZones are mangled (issue #334)
- was using the ids coming from the zones instead of the sorted order
  from ensightFaces, which led to a clash in the mesh point maps that
  were manifest as a jumbled order.

BUG: missing newlines in foamToEnsight nfaced/nsided ASCII output

- was correct for foamToEnsightParts, but not for foamToEnsight

--
* Many thanks to Justin Graupman for all of his testing,
  which has been a great help in isolating and fixing various issues.
2016-12-15 00:09:10 +01:00
86c5f9e3b6 BUG: allocation mismatch in fluxSummary (issue #342)
ENH: reduce number of variables, simplify code

- Note: use boolList instead of scalarList for managing the face signs
  since its lazy evaluation can be convenient when sign information is
  not required.
2016-12-14 12:21:45 +01:00
e7a4a3a73d STYLE: some documentation for sampledSurfaces specification 2016-12-14 17:54:23 +01:00
36173b5306 COMP: compile with single-precision 2016-12-14 14:21:33 +01:00
abc941a0f1 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-14 17:22:48 +00:00
4f4b1d76c4 BUG: renumberMesh: Checking for cellProcAddressing after deleting it.
This is part of #340.
2016-12-14 17:21:56 +00:00
688558998f Merge branch 'feature-extract-eulerian-particles' into 'develop'
New feature extract eulerian particles

New functionality to extract particle data from multiphase calculations and replay the data in lagrangian cases, using both the raw input particle data, and data processed into a (smaller) set of injection locations.

See merge request !82
2016-12-14 15:57:12 +00:00
f0a046fa81 GIT: Resolved conflict 2016-12-14 15:56:58 +00:00
7f2907f617 ENH: Added tutorials to show extraction of particle data from eulerian cases and subsequent injjection via lagrangian cases 2016-12-14 15:51:11 +00:00
7af521e0be ENH: Added new injection models to intermediate and spray libraries 2016-12-14 15:50:12 +00:00
3938c03c57 ENH: Added new InjectedParticleInjection lagrangian injection model
Description
    Replays an set of particle data based on an injectedParticleCloud,
    using the assumption of one particle per parcel.

Usage
    \verbatim
    model1
    {
        type            injectedParticleInjection;
        SOI             0;
        massTotal       0; // Place holder only
        parcelBasisType fixed;
        nParticle       1; // 1 particle per parcel
        cloud           eulerianParticleCloud;
        positionOffset  (-0.025 2 -0.025);
    }
    \endverbatim
2016-12-14 15:48:38 +00:00
f9a9c7148e ENH: Added new injectedParticleDistributionInjection lagrangian injection model
Description
    Interrogates an injectedParticleCloud to convert the raw particle
    data into a set of 'binned' injectors.

    The bins are set according to the particle \c tag property, from which:
    - diameters are converted into \c general distributions with a
      user-specified bin width
    - raw velocity and diameter data are resampled and stored to provide
      variations per injector

    The mass to inject can be set according to the raw input data mass total
    by using the \c applyDistributionMassTotal switch

Usage
    \verbatim
    model1
    {
        type            injectedParticleDistributionInjection;
        SOI             0;
        parcelBasisType mass;
        cloud           eulerianParticleCloud;
        positionOffset  (-0.025 2 -0.025);
        binWidth        0.1e-3;
        parcelsPerInjector 500;
        resampleSize    100;                    // optional
        applyDistributionMassTotal yes;

        // Placeholder only when using applyDistributionMassTotal
        massTotal       0;
    }
    \endverbatim

Note
    The each injector location is assumed to be operating under steady
    conditions, i.e. using a constant flow rate profile

SourceFiles
    InjectedParticleDistributionInjection.C

See also
    Foam::injectedParticle
    Foam::injectedParticleCloud
    Foam::functionObjects::extractEulerianParticles
    Foam::distributionModels::general
2016-12-14 15:47:15 +00:00
e8171d0150 STYLE: Updated header documentation 2016-12-14 15:43:57 +00:00
f59c9762bb Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-14 07:37:06 -08:00
730231446a ENH: extractEulerianParticles function object parallel and usability updates 2016-12-14 15:28:55 +00:00
76023b38ad BUG: Corrected coding error 2016-12-14 15:27:39 +00:00
6a3c2c2fbc STYLE: Updated comment 2016-12-14 15:27:19 +00:00
26ac7e11fd ENH: Lagrangian injection - cache volumeTotal for continuous restart 2016-12-14 15:26:28 +00:00
43e4571143 ENH: subModelBase - added function to get a dictionary 2016-12-14 15:25:39 +00:00
8c8cf9210f ENH: distributionModels - pass in construction dict instead of parent dict 2016-12-14 15:25:00 +00:00
a3ef5cd137 Merge branch 'feature-chunkingComms' into 'develop'
Pstream: added maxCommsSize setting to do (unstructured) parallel transfers in blocks.

Tested:
- with maxCommsSize 0 produces exactly same result as plus.develop
- compiles with label64
- with maxCommsSize e.g. 3 produces exactly same result as plus.develop
- with maxCommsSize=0 exactly the same messages (with Pstream::debug = 1) as plus.develop

See merge request !85
2016-12-14 15:18:42 +00:00
6acd407f8a STYLE: Time: indentation 2016-12-14 14:10:50 +00:00
00ac073e17 ENH: fvMotionSolvers: added solidBodyDisplacementLaplacian
Applies a displacementLaplacian on top of a solid-body motion function
2016-12-14 13:00:14 +00:00
4ff163aed7 COMP: combinePatchFaces: missing include file 2016-12-14 11:45:32 +00:00
1f87361208 ENH: snappyMultiRegionHeater: remove confusing README 2016-12-14 11:30:33 +00:00
0e7e5734c2 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-14 11:28:09 +00:00
4c607b91d9 Merge branch 'bugFixes' into 'develop'
ENH: Usage of locationsInMesh for tutorial and other fix

- Example for Using multiple locations in mesh
- bugFix for rhoPimpleFoam case

See merge request !86
2016-12-14 11:17:22 +00:00
67ea233d21 ENH: Usage of locationsInMesh for tutorial and other fix 2016-12-14 11:04:15 +00:00
5292ef36bf ENH: controlDict: extended comment 2016-12-14 09:17:29 +00:00
5cd1ad04a7 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-14 08:37:38 +00:00
bc1678581e ENH: Updated compiler scripts. Fixes #341 2016-12-14 08:37:28 +00:00
9ffd7aed3f BUG: Tutorial update - see #336 2016-12-14 08:31:03 +00:00
162a0eac4d Adding autoPtr clone constructors and correcting T.oldTime() 2016-12-13 13:30:42 -08:00
13c3b1d617 ENH: Allwmake -log=name option to specify log name (issue #333)
- helpful when testing various builds
2016-12-13 20:53:05 +01:00
dfb5fae5de BUG: Fixing oldTime Tw and Reference Value of humidityTemperatureCoupledMixed BC 2016-12-13 09:44:25 -08:00
b77dbc9c6c ENH: effectivenessHeatExchangerSource - updated output 2016-12-13 15:50:16 +00:00
b1107081cc ENH: effectivenessHeatExchangerSource - updated output 2016-12-13 15:47:42 +00:00
965287d70c ENH: effectivenessHeatExchangerSource - protected divisions 2016-12-13 15:33:14 +00:00
36f8895e78 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-13 07:20:39 -08:00
ad0338123a BUG: Tutorial update - fixes #336 2016-12-13 12:45:01 +00:00
7063555abb BUG: Tutorial update - fixes #339 2016-12-13 12:43:02 +00:00
ad807e8d31 BUG: Updates to DyM tutorials - see #340 2016-12-13 12:40:58 +00:00
3fee08b034 ENH: cshrc: suppress printing 2016-12-13 09:24:25 +00:00
c0a2c16f6c Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-12 10:36:33 -08:00
88128e0392 ENH: compressibleInterDyMFoam enhancements for mesh motion and sphere drop test case tutorial 2016-12-12 10:34:49 -08:00
e453f0bf02 ENH: Pstream: added maxCommsSize setting to do (unstructured) parallel transfers in blocks.
This is controlled by the setting maxCommsSize in etc/controlDict which
specifies the max number of bytes per exchange. If set to <= 0 it
is ignored. This max size of messages is important when doing e.g.
load balancing which can send over whole meshes.
2016-12-12 17:32:24 +00:00
f3d8be7abe ENH: dynamicMultiMotionSolverFvMesh: new dynamicFvMesh type.
Takes cellZones and motionSolver per cellZone. See also dynamicMotionSolverListFvMesh.
2016-12-12 16:05:21 +00:00
16c178be66 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-12 13:10:06 +00:00
98a2527087 ENH: foamList - updated link libs to avoid error on exiting 2016-12-12 12:37:57 +00:00
28bd150db6 ENH: foamList - updated link libs to avoid error on exiting 2016-12-12 12:37:57 +00:00
989883d62b GIT: Resolved merge conflict 2016-12-12 12:23:45 +00:00
e2cdac590f STYLE: removed unused code to avoid compiler warning 2016-12-12 12:15:40 +00:00
164c545b47 ENH: blockEdge - updated bezier 2016-12-12 12:15:01 +00:00
4c79a85baa ENH: combustion models - updated for current API 2016-12-12 12:14:26 +00:00
6408cd1fbb ENH: outletMappedUniformInlet BC - Cp only calculated for patch and not entire domain; input keywords updated for consistency 2016-12-12 12:13:53 +00:00
c0f44ac4f3 MRG: Integrated foundation code 2016-12-12 12:10:29 +00:00
1a9ee8f07b COMP: ubuntu build with CGAL lacks dependency on gmp/mpfr (issue #288)
- slightly odd. Building CGAL on other Linux systems have a proper
  ldd dependency for gmp/mpfr, but ubuntu doesn't
2016-12-09 16:55:04 +00:00
83f3044db9 tutorials/compressible/rhoSimpleFoam/squareBend: Stabilize by further relaxing e
Patch contributed by Mattijs Janssens
http://bugs.openfoam.org/view.php?id=2382
2016-12-09 16:53:35 +00:00
e8aba1e6e9 gaussConvectionScheme: Removed temporary warnUnboundedGauss debug switch
which provided warning about backward-compatibility issue with setting div
schemes for steady-state.  It caused confusion by generating incorrect warning
messages for compressible cases for which the 'bounded' should NOT be applied to
the 'div(phid,p)'.
2016-12-09 16:36:56 +00:00
7d54e57fa0 Renamed searchableCurve -> searchableExtrudedCircle
to clarify purpose.

Patch contributed by Mattijs Janssens
2016-12-09 16:30:46 +00:00
b17a568569 MRFZone: Do not correct boundary conditions when inactive
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2380
2016-12-09 16:29:27 +00:00
1b3d98586a PBiCGStab: Corrected to support processorAgglomerator
Patch contributed by Battijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2383
2016-12-09 16:27:54 +00:00
b4b77e76c9 mappedFieldFvPatchField: Corrected autoMap function
Patch contributed by Mattijs Janssens
2016-12-09 15:08:43 +00:00
eb00c8021d ENH: provide log option for top-level builds (issue #333) 2016-12-09 14:44:26 +00:00
27ae7d5b00 STYLE: minor comments added to ensightSurfaceReader 2016-12-09 14:38:15 +00:00
e256e72039 fieldAverageTemplates: General clean-up 2016-12-09 14:28:04 +00:00
97a27dc172 dynamicMotionSolverListFvMesh: Ensure independence of zone-based motion 2016-12-09 14:19:07 +00:00
b6d79ed4ce BUG: scaleFactor for fieldValue function-objects is 'sticky' (issue #331)
- if set in a dictionary and later removed, the intermediate value is
  retained rather than reverting to a normal default value.

- same applies for a few other function objects and their variables
2016-12-08 11:33:39 +00:00
422993f9a5 ENH: add weightedAreaIntegrate operation for surfaceFieldValue 2016-12-08 11:00:18 +00:00
b4182c60a3 BUG: inconsistency in periodic restart for fieldAverage (issue #330)
- the interval for the next restart was not being adjusted when the
  file was reread, or when doing a complete simulation restart.
2016-12-08 09:32:55 +00:00
1b2cfde773 STYLE: minor typo in mapFields documentation 2016-12-08 09:19:32 +00:00
7354efa462 Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus 2016-12-07 13:04:33 -08:00
11479c51d7 ENH: Changes in handling topological changes in VOF solvers
1) Using divU instead of fvc::absolute(phi,U) in TEqn as the latter uses latest time meshPhi which is inconsistent
2) Adding fvc::interpolate(U) when topo changes
3) in pEq for compressible dgdt is updated using the latest rho1 and rho2 after compressible effects are considered
2016-12-07 12:57:32 -08:00
08f0f3dddb STYLE: avoid refCast in favour of the fvMeshFunctionObject mesh_ variable 2016-12-07 17:32:31 +00:00
d2f6f7e391 tutorials/incompressible/pisoFoam/les/motorBike/motorBike/Allrun: Removed spurious '-parallel' option
Resolves bug-report http://bugs.openfoam.org/view.php?id=2378
2016-12-07 15:39:40 +00:00
2c7eff8d6b Merge remote-tracking branch 'origin/feature-cellSetRemove' into develop 2016-12-07 14:13:00 +00:00
e518acb594 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-07 13:16:05 +00:00
72465aaba7 BUG: displacementMotionSolver: access incorrect region. Fixes #327. 2016-12-07 13:15:37 +00:00
8321f1ffcc ENH: initial support for handling subRegions in regionFunctionObject
- propagate updated objectRegistry methods (eg, lookupObjectRef etc)
  into regionFunctionObject
2016-12-07 12:09:21 +00:00
7d61b870c2 BUG: injectedParticle/Cloud updates 2016-12-07 09:26:58 +00:00
87056a2308 ENH: pairPatchAgglomeration - updated constructors 2016-12-07 09:25:42 +00:00
56071431ac STYLE: minor spelling correction 2016-12-07 09:25:08 +00:00
e73d2c5d29 BUG: surfaceNoise - corrected fftWriteInterval operation 2016-12-06 16:19:01 +00:00
3d08651324 PVReaders: Update link order to avoid problems on Ubuntu
Resolves bug-report http://bugs.openfoam.org/view.php?id=2372
2016-12-06 10:57:35 +00:00
5f9be34a42 Merge branch 'feature-objectRegistry' into 'develop'
ENH: improve objectRegistry functionality (issue #322)

- Recursive searching for objects within a registry is now optional
  (previous it was always done).

  A recursive search effectively blocks the construction of sub-sub-registries
  if their names are 'masked' by some parent level sub-registry with
  the same name! (BUG)

- Recursive search is now turned OFF by default, which makes it consistent
  with dictionary and probably causes the least number of surprises.

----
Various new convenience methods added:

lookupObjectRef()
- returns a non-const reference.
  For example,

      volScalarField& U = mesh().lookupObjectRef<volScalarField>("U");

  Instead of

      volScalarField& U = const_cast<volScalarField&>
      (
          mesh().lookupObject<volScalarField>("U")
      );

--
lookupObjectPtr()
- returns a const pointer, and nullptr on failure.
  For example,

      const volScalarField* Uptr = mesh().lookupObjectPtr<volScalarField>("U");
      if (Uptr)
      {
          const volScalarField& U = *Uptr;
          ...
      }

  Instead of

      if (mesh().foundObject<volScalarField>("U"))
      {
          const volScalarField& U = mesh().lookupObject<volScalarField>("U");
          ...
      }

--
lookupObjectRefPtr()
- returns a non-const pointer, and nullptr on failure.
  For example,

      volScalarField* Uptr = mesh().lookupObjectRefPtr<volScalarField>("U");
      if (Uptr)
      {
          volScalarField& U = *Uptr;  // use as reference
          (*Uptr) = ...;              // or use directly
      }

  Instead of

      if (mesh().foundObject<volScalarField>("U"))
      {
          volScalarField& U = const_cast<volScalarField&>
          (
              mesh().lookupObject<volScalarField>("U")
          );
      }

--
sortedNames()
- now works with template parameters and with regular expression
  matching as well.
  For example,

      wordList names  = mesh().sortedNames();
      wordList fields = mesh().sortedName<volScalarField>();

  Instead of

      wordList names  = mesh().sortedNames();
      wordList fields = mesh().names<volScalarField>();
      Foam::sort(fields);

--

See merge request !83
2016-12-06 10:48:43 +00:00
5c7b3c7886 reactingTwoPhaseEulerFoam: Corrected LTS support
Resolves bug-report http://bugs.openfoam.org/view.php?id=2374
2016-12-06 09:30:50 +00:00
b5f0aa7ff7 Merge branch 'feature-runtime-post-pro-camera-update' into 'develop'
runTimePostProcessing FO camera update

- Removed the camera 'mode'
    - The (old) static camera was only appropriate when parallel
      projection was inactive, and the view was centred at (0 0 0)
    - Camera input now always requires 'position' and 'focalPoint'
    - Clip box is now optional.  Note that this is applied after the
      camera
      set-up and so will override the camera position
    - View angle is only appropriate when not using parallel projection
    - Zoom now required, applied after all other operations
      - 1 = do nothing, >1 = zoom in, <1 = zoom out

    Example input:

```
        camera
        {
            // Total number of frames to generate
            nFrameTotal 1;

            // Parallel projection flag
            parallelProjection no;

            focalPoint  (0 0 0);
            up          (0 1 0);
            position    (0 0 1);

            // Optional entries
            clipBox     (-0.0206 -0.0254 -0.0005) (0.29 0.0254 0.0005);
            viewAngle   20;
            zoom        1.1;
        }
```

See merge request !81
2016-12-06 09:24:23 +00:00
aa9d90c495 ENH: runTime pp - updated header documentation 2016-12-06 09:23:55 +00:00
6508c4e9b7 ENH: runTime pp - new zoom entry now optional 2016-12-06 09:17:54 +00:00
db3699f8ab ENH: redistributePar: remove shm data 2016-12-06 09:10:30 +00:00
c0de376b2a Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop
Conflicts:
	src/TurbulenceModels/compressible/turbulentFluidThermoModels/derivedFvPatchFields/outletMappedUniformInletHeatAddition/outletMappedUniformInletHeatAdditionFvPatchField.H
2016-12-05 15:32:26 -08:00
81f1072fb0 ENH: Adding maxDeltaxyzCubeRootLESDelta LES delta model 2016-12-05 15:24:50 -08:00
d6db12b549 STY: Adding documentation for volume sampling in regionSizeDistribution FO 2016-12-05 15:07:13 -08:00
fc8f2ac94b ENH: Adding tutorial for outletMappedUniformInletHeatAddition 2016-12-05 14:40:11 -08:00
a95b7aa6b7 alphatWallBoilingWallFunctionFvPatchScalarField.H: corrected mode 2016-12-05 20:08:24 +00:00
6eeba45c21 advectiveFvPatchField, waveTransmissiveFvPatchField: Updated docs
Resolves bug-report http://bugs.openfoam.org/view.php?id=2373
2016-12-05 20:07:40 +00:00
4a77294c7c ENH: renumberMesh: remove old files 2016-12-05 15:24:52 +00:00
789cef44fc Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-05 08:54:15 +00:00
94fd633243 thermalBaffle: ensure mappedPatchBase is updated following mesh topology changes
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2323
2016-12-05 08:44:43 +00:00
304af9fc5f reactingTwoPhaseEulerFoam: Added LTS support to the face-momentum algorithm 2016-12-04 10:14:43 +00:00
2b551d8751 metisDecomp: Corrected return from metisDecomp::decompose
Resolves bug-report http://bugs.openfoam.org/view.php?id=2370
2016-12-03 19:26:21 +00:00
2fa6436b6e setFields: Added '-dict' option
Resolves bug-report http://bugs.openfoam.org/view.php?id=2366
2016-12-03 11:45:36 +00:00
b57859269b tmp: Removed temporary global functions 2016-12-03 11:44:18 +00:00
f303f2a289 motionSolver: Removed unused member data 2016-12-02 12:44:09 +00:00
c300fd5ca8 dictionary: Handle the distinction between '.' as a keyword character and a scope operator
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2358
2016-12-02 12:23:17 +00:00
ab760b6cd1 tutorials/multiphase/reactingTwoPhaseEulerFoam/RAS/wallBoiling.*: Correct q entry
Patch contributed by Mattijs Janssens
2016-12-02 12:22:30 +00:00
6534b58784 processorMeshes::read destruct before de-register
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2368
2016-12-01 22:07:50 +00:00
64548a6283 meshToMesh0: fixed segmentation fault
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2363
2016-12-01 19:55:39 +00:00
0030d9ea35 etc/bashrc,cshrc: Added FJMPI and INTELMPI
Resolves request http://bugs.openfoam.org/view.php?id=2367
2016-12-01 19:53:08 +00:00
031c75374e ENH: Relocated injectedParticle class to lagrangian library 2016-12-01 17:04:37 +00:00
458357226a BUG: Removing code unintenionally committed 2016-12-01 16:59:47 +00:00
1d3782a8af ENH: improve IOobjectList functionality (issue #322)
- provide additional filtering methods on names(), sortedNames()
  For example,

      IOobjectList objects = ...;
      wordReList selection = ...;

      objects.sortedNames(VolFieldType::typeName, selection);
2016-12-01 17:59:38 +01:00
8602fd13f4 ENH: Initial commit of new particleDistribution FO - generates 'general' distribution for lagrangian particle clouds 2016-12-01 16:52:37 +00:00
6d8281e217 ENH: extractEulerianParticles FO updates 2016-12-01 16:51:11 +00:00
f666f54984 ENH: distributionModels - refactored binned and general models 2016-12-01 16:50:13 +00:00
c0f1a87d54 STYLE: Code clean-up 2016-12-01 16:49:34 +00:00
445513a1dc mixerVesselAMI2D/constant/dynamicMeshDict: Removed unused motionSolverLibs entry 2016-12-01 16:13:18 +00:00
1c687baa35 dynamicMotionSolverListFvMesh: New mesh-motion solver supporting multiple moving regions
e.g. the motion of two counter-rotating AMI regions could be defined:

dynamicFvMesh   dynamicMotionSolverListFvMesh;

solvers
(
    rotor1
    {
        solver solidBody;

        cellZone        rotor1;

        solidBodyMotionFunction  rotatingMotion;
        rotatingMotionCoeffs
        {
            origin        (0 0 0);
            axis          (0 0 1);
            omega         6.2832; // rad/s
        }
    }

    rotor2
    {
        solver solidBody;

        cellZone        rotor2;

        solidBodyMotionFunction  rotatingMotion;
        rotatingMotionCoeffs
        {
            origin        (0 0 0);
            axis          (0 0 1);
            omega         -6.2832; // rad/s
        }
    }
);

Any combination of motion solvers may be selected but there is no special
handling of motion interaction; the motions are applied sequentially and
potentially cumulatively.

To support this new general framework the solidBodyMotionFvMesh and
multiSolidBodyMotionFvMesh dynamicFvMeshes have been converted into the
corresponding motionSolvers solidBody and multiSolidBody and the tutorials
updated to reflect this change e.g. the motion in the mixerVesselAMI2D tutorial
is now defined thus:

dynamicFvMesh   dynamicMotionSolverFvMesh;

solver solidBody;

solidBodyCoeffs
{
    cellZone        rotor;

    solidBodyMotionFunction  rotatingMotion;
    rotatingMotionCoeffs
    {
        origin        (0 0 0);
        axis          (0 0 1);
        omega         6.2832; // rad/s
    }
}
2016-12-01 15:57:15 +00:00
85036f78ab orthogonalSnGrad, uncorrectedSnGrad: Improved documentation
Resolves request http://bugs.openfoam.org/view.php?id=2364
2016-12-01 15:17:14 +00:00
144e08e213 reactingEulerFoam: Updated to support zoneCombustion models 2016-12-01 15:16:19 +00:00
4427d9e49c Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-12-01 14:32:02 +00:00
450d84bd77 BUG: surfaceNormalFixedValue: do not use ptf.patch(). Fixes #319 2016-12-01 14:31:22 +00:00
d5e2b73500 STYLE: simplify logic statement 2016-12-01 14:25:38 +01:00
92fa5a1921 ENH: improve objectRegistry functionality (issue #322)
- Recursive searching for objects within a registry is now optional
  (previous it was always done).

  A recursive search effectively blocks the construction of sub-sub-registries
  if their names are 'masked' by some parent level sub-registry with
  the same name! (BUG)

- Recursive search is now turned OFF by default, which makes it consistent
  with dictionary and probably causes the least number of surprises.

----
Various new convenience methods added:

lookupObjectRef()
- returns a non-const reference.
  For example,

      volScalarField& U = mesh().lookupObjectRef<volScalarField>("U");

  Instead of

      volScalarField& U = const_cast<volScalarField&>
      (
          mesh().lookupObject<volScalarField>("U")
      );

--
lookupObjectPtr()
- returns a const pointer, and nullptr on failure.
  For example,

      const volScalarField* Uptr = mesh().lookupObjectPtr<volScalarField>("U");
      if (Uptr)
      {
          const volScalarField& U = *Uptr;
          ...
      }

  Instead of

      if (mesh().foundObject<volScalarField>("U"))
      {
          const volScalarField& U = mesh().lookupObject<volScalarField>("U");
          ...
      }

--
lookupObjectRefPtr()
- returns a non-const pointer, and nullptr on failure.
  For example,

      volScalarField* Uptr = mesh().lookupObjectRefPtr<volScalarField>("U");
      if (Uptr)
      {
          volScalarField& U = *Uptr;  // use as reference
          (*Uptr) = ...;              // or use directly
      }

  Instead of

      if (mesh().foundObject<volScalarField>("U"))
      {
          volScalarField& U = const_cast<volScalarField&>
          (
              mesh().lookupObject<volScalarField>("U")
          );
      }

--
sortedNames()
- now works with template parameters and with regular expression
  matching as well.
  For example,

      wordList names  = mesh().sortedNames();
      wordList fields = mesh().sortedName<volScalarField>();

  Instead of

      wordList names  = mesh().sortedNames();
      wordList fields = mesh().names<volScalarField>();
      Foam::sort(fields);

--
2016-12-01 13:04:07 +01:00
8628ddac43 ENH: add Test-objectRegistry (issue #322)
- test clearly shows failure to insert a sub-registry when it has
  the same name as one of the parent sub-registry.
2016-12-01 12:30:38 +01:00
9e910e6c14 Merge branch 'feature-extract-eulerian-particles' of develop.openfoam.com:Development/OpenFOAM-plus into feature-extract-eulerian-particles 2016-11-30 23:32:51 +00:00
78bb633dfc ENH: extractEulerianParticles FO - refactored to output a cloud of particles - distribution analysis to follow... 2016-11-30 23:32:33 +00:00
6486209aa2 ENH: Lagrangian - added functions to add particle data as fields on an object registry 2016-11-30 17:18:48 +00:00
99a1eee024 ENH: Lagrangian - added functions to add particle data as fields on an object registry 2016-11-30 17:18:48 +00:00
5d7f8f11d6 GIT: rearrange files for surface sampling sources
- isolate the surface source (plane, iso-surface etc), from sampling
2016-11-30 10:31:07 +01:00
8b75035f29 ENH: change UnsortedMeshedSurface -> meshedSurface for sampledTriSurfaceMesh
- all sampled surface types now consistently use the same storage,
  which allows some more simplifications in the future.

- before/after comparison of the sampledTriSurfaceMesh tested with
  motorbike passenger helmet (serial and parallel). Use the newly added
  'keepIds' functionality to retain the original ids, and can also
  compare them to the original obj file with "GenerateIds" in paraview.
2016-11-29 22:56:08 +01:00
3c41b80b38 ENH: change from triSurface to meshedSurface storage for iso-surfaces
- this makes it easier to reuse the code, and sampledSurface expect
  a face (not a labelledFace), so this also eliminates a translation
  level and simplifies memory management.

- before/after comparison of the sampled iso-surfaces tested with
  iso-surfaces from interFoam/RAS/angledDuct tutorial (serial and
  parallel)
2016-11-29 17:24:26 +01:00
690f58d2cb ENH: support retention of original surface ids when sampling (related to issue #104)
For example,
    surfaces
    (
        helmet
        {
            type        sampledTriSurfaceMesh;
            surface     motorBike-passenger-helmet.obj;
            source      cells;
            keepIds     true;  <<-- NEW
        }
    );

    This will create an additional "Ids" field that can be used to sort
    or as a faceMap to recover the original face order.
2016-11-29 17:14:56 +01:00
fbd4ff38b0 STYLE: correct the documented behaviour of 'none' for function objects
- cf. Line 224 of timeControl.C
2016-12-13 10:11:17 +01:00
6f2b2aff40 STYLE: reduce script verbosity 2016-12-13 08:15:00 +01:00
17bedf58d9 STYLE: consistent of enumerations between ensight components 2016-12-13 08:09:26 +01:00
9041c9083e BUG: incorrect addressing in ensight faces/cells (issue #334)
- was erroneously using global sizing for offsets instead the processor
  local sizing.

--

STYLE: adjust variable naming, indentation for consistency
2016-12-12 17:52:02 +01:00
271c8c8c6e ENH: Added new extractEulerianParticles function object
Generates discrete particle data from multiphase calculations by
interrogating the phase fraction field at a faceZone.

Data is written in raw form, i.e. per particle collected, with
as an optional binned distribution
2016-11-29 14:56:48 +00:00
47439e4917 ENH: pairPatchAgglomeration - multiple updates 2016-11-29 14:46:19 +00:00
86982f5eb7 ENH: writeFile - return bool on successful read 2016-11-29 14:45:45 +00:00
89b1b64414 ENH: distributionModels - added new binned model to add discrete binned sizes 2016-11-29 14:45:33 +00:00
c6acd68618 ENH: Added new regionSplit2D to split 2-D regions based on an indicator field 2016-11-29 14:41:02 +00:00
966b6e730e CONFIG: incorrect MPI_HOME for (unsupported) mpich 2016-11-29 13:06:03 +01:00
026ed13c10 ENH: warn user when using constant/polyMesh/blockMeshDict (issue #309)
- the user might otherwise be unaware of the changed location
2016-11-29 12:14:48 +01:00
75b30cfb2c STYLE: eliminate the last vestiges of unallocLabelList in favour of labelUList
- both are typedefs for UList<label>
2016-11-29 11:49:46 +01:00
4ab9806348 BUG: foamToEnsight -faceZones fails (issue #317)
- was using direct face ids instead of appropriate sub-lists
- also removed typo that wasn't helping much either
2016-11-29 11:45:01 +01:00
d45d5a9e0a STYLE: remove definition of unimplemented faceZone method 2016-11-29 11:08:31 +01:00
05df4c71b6 ENH: Lagrangian models - added headers to enable derived libraries to compile 2016-11-29 09:10:37 +00:00
fcd8d71ef9 STYLE: ensightCells, ensightFaces sub-lists are always allocated
- remove remnant nullptr check
2016-11-29 09:06:30 +01:00
a2bba390f2 COMP: improve robustness of cmake (vtk) builds when directories have moved 2016-11-28 23:28:21 +01:00
b69ab6c895 COMP: reduce compile noise for paraview modules
- vtkkwiml headers use old-style casts, so reduce compile-time warnings
2016-11-28 22:34:38 +01:00
f281f77e4a Updated member type comments
Resolves bug-report http://bugs.openfoam.org/view.php?id=2356
2016-11-28 21:23:00 +00:00
e35a566302 CONFIG: downgrade back to paraview-5.0.1
- newer versions of paraview build fine, and so do the reader modules,
  but the reader modules won't load (need to upgrade the classes).
2016-11-28 22:14:01 +01:00
4013532aaa STYLE: simplify adios rules
- now that adios_config flags are largely working in ThirdParty
2016-11-28 22:12:01 +01:00
dec8bd46c3 BUG: _foamAddPath not available when foamPV alias/function is used
STYLE: only use paraview settings when actually available

- this means executing makeParaView prior to building OpenFOAM itself,
  but is consistent with the instructions given by makeParaView,
  and elminates anticipating the source location from the paraview
  config file, which increases the build flexibilty for ThirdParty
2016-11-28 15:35:27 +01:00
39e032aef6 ENH: runTimePostProcessing FO camera update
- Removed the camera 'mode'
    - The (old) static camera was only appropriate when parallel
      projection was inactive, and the view was centred at (0 0 0)
    - Camera input now always requires 'position' and 'focalPoint'
    - Clip box is now optional.  Note that this is applied after the
      camera
      set-up and so will override the camera position
    - View angle is only appropriate when not using parallel projection
    - Zoom now required, applied after all other operations
      - 1 = do nothing, >1 = zoom in, <1 = zoom out

    Example input:

        camera
        {
            // Total number of frames to generate
            nFrameTotal 1;

            // Parallel projection flag
            parallelProjection no;

            // Optional clippling box
            clipBox     (-0.0206 -0.0254 -0.0005) (0.29 0.0254 0.0005);
            focalPoint  (0 0 0);
            up          (0 1 0);
            position    (0 0 1);
            viewAngle   20;
            zoom        1.1;
        }
2016-11-28 14:21:11 +00:00
21251970ac Merge branch 'feature-noise-multiple-files' into 'develop'
Feature noise multiple files

Enabled pointNoise and surfaceNoise models to operate on multiple input files
- For each model, the files should be specified by the `inputFiles` keyword
- When applied to pointNoise, the file is no longer required when specifying the CSV input data
- the singular `inputFile` entry is still available to the surfaceNoise model for backwards compatibilty

See merge request !80
2016-11-28 13:50:14 +00:00
494ce72e3b ENH: surfaceNoise - provide backwards compatibility for inputFile keyword 2016-11-28 13:44:53 +00:00
414b128f7f combustionModels::zoneCombustion: Corrected base-class
to avoid duplicate instantiation of the thermodynamics package.

The 'zoneCombustion' model is now selected in constant/combustionProperties by
either

combustionModel zoneCombustion<psiCombustionModel>;

or

combustionModel zoneCombustion<rhoCombustionModel>;

as appropriate.

Resolves bug-report http://bugs.openfoam.org/view.php?id=2354
2016-11-28 11:59:17 +00:00
f4e53b2d3a Merge branch 'feature-functionObject-consistentWrite' into 'develop'
Function objects - ensure objects are up-to-date when writing

See merge request !79
2016-11-28 09:51:07 +00:00
2903722a39 Revert "ENH: ensure written and evaluated values correspond (issue #311)"
This reverts commit c554dc7b7d.

Functionality available in more general change in commit fb78378
2016-11-28 09:48:06 +00:00
3077a11c0d Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-28 09:33:23 +00:00
da4dad4382 ENH: snappyHexMesh: improved comment 2016-11-28 09:32:58 +00:00
1022f4fc49 STYLE: Minor code formatting 2016-11-28 09:27:13 +00:00
3e8415e119 BUG: enightPartFaces - use virtual size() function in write method 2016-11-28 09:26:51 +00:00
8b219feda2 Updated member type comments
See http://bugs.openfoam.org/view.php?id=2356
2016-11-28 09:22:56 +00:00
00c3c6f9a7 ENH: improve configuration of gperftools (now at version 2.5)
- support gperftools-none, gperftools-system configurations
  as per other third-party packages.

STYLE: clean up more environment variables

CONFIG: testing adios rule
2016-11-27 16:24:40 +01:00
0013284e94 tensor::eigenValues: Test the magnitude of 'QQ' before dividing by it.
Resolves bug-report http://bugs.openfoam.org/view.php?id=2351
2016-11-26 20:49:54 +00:00
9c4653e9c1 functionObject.H: Updated documentation
Patch contributed by Bruno Santos
Resolves patch request http://bugs.openfoam.org/view.php?id=2355
2016-11-26 18:42:25 +00:00
25e0a41eef functionObjects::yPlus: Removed the AUTO_WRITE option on yPlus
Writing is controlled directly by the functionObject
2016-11-26 17:30:52 +00:00
6a26ac850b POSIX: removed spurious double literal suffix 2016-11-25 22:40:49 +00:00
1d1f71f7cd foamDictionary: Added support for manipulating lists of dictionaries
- provides support for manipulating polyMesh/boundary

  - changed behaviour of disableFunctionEntries option to preserve
    #include

  - dictionary: added reading of lists of dictionaries.
    + each list element may be accessed using the 'entryDDD' keyword
      according to their list index.

Patch contributed by Mattijs Janssens
2016-11-25 20:33:03 +00:00
dc1c37e464 COMP: add in plain lib/ directories for boost, cgal, fftw
- these directories are sometimes used for a central, non-thirdparty, non-system
  installation

- leave gmp and mpfr as is, since it is not clear how these would interact with system
  versions
2016-11-25 20:43:27 +01:00
81de1dc9ac topoSet: cellZoneSet, pointZoneSet extensions
cellZones and pointZones can now be created in one action without the
need to first create a cellSet or pointSet and converting that to the
corresponding zone, e.g.

actions
(
    // Example: create cellZone from a box region
    {
        name    c0;
        type    cellZoneSet;
        action  new;
        source  boxToCell;
        sourceInfo
        {
            box   (0.04 0 0)(0.06 100 100);
        }
    }
);
2016-11-25 16:01:41 +00:00
bf326cc4f7 fileModification: time checking now with nano-second precision
fileModificationSkew: now a floating-point number to support sub-second
specification.

Patch contributed by Mattijs Janssens
2016-11-25 15:36:10 +00:00
5272d324a4 functionObjects::timeActivatedFileUpdate: Copy file then move
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2324
2016-11-25 14:37:24 +00:00
bdfa4f9c05 functionObjects::fieldExpression: Correct and improve warning messages
postProcess -func MachNo

previously generated the warning

Executing functionObjects
--> FOAM Warning :     functionObjects::MachNo MachNo cannot find required field U

which is incorrect; the field 'U' is available but the
thermophysicalProperties is not.  Now 'postProcess' generates the
warning:

Executing functionObjects
--> FOAM Warning :     functionObjects::MachNo MachNo cannot find required object thermophysicalProperties of type fluidThermo
--> FOAM Warning :     functionObjects::MachNo MachNo failed to execute.

Resolves bug-report http://bugs.openfoam.org/view.php?id=2352
2016-11-25 12:20:07 +00:00
a14267d83b BUG: pointNoise - corrected base file name 2016-11-25 12:15:06 +00:00
8462be6a46 zoneCombustion: New cellZone based combustion model
in which the reactions are enabled only in the specified list of
cellZones.  e.g. in constant/combustionProperties

combustionModel zoneCombustion<psiChemistryCombustion>;

active  true;

zoneCombustionCoeffs
{
    zones (catalyst);
}

and in constant/zoneCombustionProperties

combustionModel laminar<psiChemistryCombustion>;

active  true;

laminarCoeffs
{}
2016-11-25 11:20:07 +00:00
2790d64c4f ENH: waveModels - new and updated tutorials 2016-11-25 11:16:20 +00:00
21b3f88a72 ENH: waveModels - refactored time scaling coefficient 2016-11-25 10:49:53 +00:00
02e9433d73 BUG: Boussinesq wave model - corrected coefficient reported by Gabi 2016-11-25 10:49:23 +00:00
043bf18d98 functionObjects::grad: Avoid cache conflict with 'postProcess' utility
Resolves bug-report http://bugs.openfoam.org/view.php?id=2350
2016-11-24 23:04:01 +00:00
00174405c6 ENH: noiseModels - enable models to accept lists of file names 2016-11-24 21:31:08 +00:00
9aa9d1d1b4 ENH: improve interoperability of triSurface with other surface mesh classes
- make it easier to transfer triSurface information into MeshedSurface
  etc.
2016-11-24 18:28:57 +01:00
c3005794ab ENH: provide triSurfaceTools::validTri() method to reduce code duplication
- identical code was present in surfaceCheck (original source),
  and isoSurface, isoSurfaceCell (copies).

- add in a MeshedSurface<face> variant as well, since this will likely
  be needed in the near future
2016-11-24 15:31:32 +01:00
da78cba7da BUG: surfMesh.write() not working with AUTO_WRITE off
- add writeObject method
2016-12-01 15:15:50 +01:00
46e396af49 ENH: surfMesh::setWriteOption to adjust the write option of all components
- otherwise difficult to avoid auto-write etc.

- propagate similar changes to MeshedSurfaceAllocator, where is makes
  the most sense.
2016-12-01 15:07:16 +01:00
7b450a2915 BUG: update points reference in surfMesh fails (issue #320)
- Should be updating references (shallow copy), but triggers a deep copy
  instead. Likely introduced by 6e573ad7e8.
2016-11-30 14:13:01 +01:00
ed27b25ff8 STYLE: use meshCells() instead of cutCells() for consistency
- other sampled surface types use meshCells() throughout.
  Only cuttingPlane was different.
2016-11-24 15:33:17 +01:00
907bde821d STYLE: fixup usage for -clean/-noClean options 2016-11-25 01:10:25 +01:00
0142c83068 ENH: add motorBike-passenger-helmet.obj for test cases
- This is simply the normal helmet geometry, but shifted to where a
  passenger head may be. It can be used for surface sampling etc.
2016-12-02 10:10:32 +01:00
8563f892a9 ENH: provide a 'dimensioned' null-like constructor for dimensionedType
- The null constructor already creates a dimensionless Zero,
  but named "undefined".

  Provide an constructor for a dimensioned Zero,
  but named "0" for universal clarity to its value.
2016-12-02 08:48:01 +01:00
fb78378959 ENH: Function objects - ensure objects are up-to-date when writing 2016-11-24 12:36:52 +00:00
7734d7ffd7 ENH: Tutorial updates 2016-11-24 12:11:43 +00:00
b7ea6ee24e Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-24 12:05:24 +00:00
9316088550 STYLE: Relocated DFSEM tutorial 2016-11-24 12:05:12 +00:00
58fad3ab79 BUG: snappyHexMesh with -decomposeParDict option (issue #265)
- only occurs in combination with distributedTriSurfaceMesh in snappy.

- workaround similar to that previously used for surfaceRedistributePar
  (issue #60).

Minor adjustment of incompressible motorBike tutorial to detect use of
distributedTriSurfaceMesh.
2016-11-24 12:02:11 +01:00
55ed6ec776 STYLE: use MUST_READ consistently for decomposeParDict
- there was a slight mix of MUST_READ and MUST_READ_IF_MODIFIED
  but with no obvious code to handle runtime modified values
  of the decomposition, or how this works with alternative
  dictionaries.
2016-11-24 11:26:03 +01:00
0bb9459cfc primitiveShapes::plane: Removed redundant 'explicit'
Declaration of 'explicit' constructor without a single argument are redundant.
2016-11-23 16:22:10 +00:00
7f330cef40 etc/caseDicts/postProcessing/fields: New 'add' and 'subtract' functionObjects 2016-11-23 16:21:38 +00:00
bc05a40b56 ENH: waveModel - updated restart method 2016-11-23 15:48:56 +00:00
c7b51f98e7 ENH: waveModel - enable restart 2016-11-23 14:57:45 +00:00
e9e9760329 CONFIG: bump versions of various third-party sources
* boost 1_62_0 (Sept 2016)

* CGAL 4.9 (Sept 2016)
  - now has headers-only mode that could be interesting

* FFTW 3.3.5 (Jul 2016)

* openmpi 1.10.4 (Sept 2016)
  - the first openmpi 2.x release is also available, but too early to switch

* paraview 5.2.0 (Nov 2016)
  - builds without additional patching

STYLE: removed unneeded CMake environment variables
2016-11-23 14:14:06 +01:00
fa430cc407 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-23 12:10:33 +00:00
8c08ad6667 ENH: mergeOrSplitBaffles: allow operation on selected patches. Fixes #314. 2016-11-23 12:09:31 +00:00
ba6ae13b5a Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-23 11:22:01 +00:00
dd989a8600 BUG: Corrected constructor initialisation error introduced in last commit; code tidying 2016-11-23 11:21:23 +00:00
0b83cebd12 BUG: wave model active absorption loop should be over all patch faces 2016-11-23 10:41:37 +00:00
a895f20759 BUG: waveModel - set U to zero in else branch 2016-11-22 15:42:12 +00:00
87a566c11c STYLE: minor code typo corrections 2016-11-22 15:34:37 +00:00
7eaa46a08b massRosinRammler: New Lagrangian size-distribution model
Corrected form of the Rosin-Rammler distribution taking into account the
    varying number of particels per parces for for fixed-mass parcels.  This
    distribution should be used when
    \verbatim
        parcelBasisType mass;
    \endverbatim

    See equation 10 in reference:
    \verbatim
        Yoon, S. S., Hewson, J. C., DesJardin, P. E., Glaze, D. J.,
        Black, A. R., & Skaggs, R. R. (2004).
        Numerical modeling and experimental measurements of a high speed
        solid-cone water spray for use in fire suppression applications.
        International Journal of Multiphase Flow, 30(11), 1369-1388.
    \endverbatim
2016-11-22 15:25:43 +00:00
558006afd2 BUG: Corrections to commit 1f826361 for issue #306 2016-11-22 15:12:10 +00:00
1248851fa4 BUG: waveModel - removed direction() function - co-ordinate system takes care of direction 2016-11-22 15:04:05 +00:00
e619a82ae6 COMP: minor adjustments for compiling with single-precision 2016-11-22 15:58:54 +01:00
1f826361c6 STYLE: Consistency updates to change input of <var>Name to <var>. Fixes #306 2016-11-22 14:50:33 +00:00
19bd06c850 COMP: adjust vtk formatting for 64-bit labels 2016-11-22 10:27:11 +01:00
f911344ccb Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus 2016-11-21 12:10:21 -08:00
5325af4626 BUG: Following issue 284 for particle switching processors flag 2016-11-21 11:54:31 -08:00
143e99194f ENH: Adding functionality to scalarTransport FO and residence time tutorials for VOF
and single phase cases. Registration of the compressed flux in interFoam as it is
needed for the FO if used.
2016-11-21 09:21:45 -08:00
d9740aa33e ENH: redistributePar: remove pointFields 2016-11-21 17:20:34 +00:00
dfbb9d0900 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop
Conflicts:
	tutorials/combustion/fireFoam/LES/compartmentFire/Allclean
2016-11-21 07:39:46 -08:00
ab40ddaaf3 Adding fireCompartment tutorial for new pyrolysis thermo, thermocouple FO and EDC combustion model 2016-11-21 07:36:05 -08:00
784461b2fa ENH: make search of instances in IOobject::typeHeaderOk optional (issue #245)
- in specific cases it can be useful to suppress searching the instances.
  For example, if one only wishes to check if a "points" is available at
  the given time instance, without searching backwards through all
  times.
2016-11-21 14:28:40 +01:00
cf4d945aa1 Matrix: Minor reformatting 2016-11-21 11:47:25 +00:00
c554dc7b7d ENH: ensure written and evaluated values correspond (issue #311)
- Avoids possible discrepancy when the user selects non-coincidental
  values for executeInterval and writeInterval.

- zeroGradient and ddt2 function objects
2016-11-21 12:36:04 +01:00
c7c2808bee Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus 2016-11-21 09:44:54 +00:00
19cb3b0454 STYLE: porosityModel - minor cleanup of bounds output 2016-11-21 09:44:00 +00:00
cbf43acd30 ENH: provide static uniq method in wordReListMatcher (issue #259)
- this functionality will be more frequently used in the future,
  thus place in a commonly available location.
2016-11-21 10:38:22 +01:00
a6a90838fa STYLE: adjust tutorial Allrun scripts (issue #310)
- A few without a 'cd' at the start.
  Use $(getApplication) directly in more places (for clarity).
2016-11-21 10:18:00 +01:00
21679c04e4 STYLE: adjust tutorial Allclean scripts (issue #310)
- A few without a 'cd' at the start.
  Several remove files that are already covered by the cleanCase function.
2016-11-20 17:26:44 +01:00
f3cc16e42c ENH: Avoid constant/polyMesh/blockMeshDict (issue #309)
- relocate to system/blockMeshDict, which avoids it being cleaned out
  accidentally
2016-11-20 16:50:47 +01:00
8ba4e3c370 ENH: make search of time instances in IOobject optional (issue #245)
- Still needs more attention.

--
STYLE: fix minor typos in documentation
2016-11-20 14:41:43 +01:00
5c15769dfe GIT: revert back to system openmpi (issue #308)
- consistently use SYSTEMOPENMPI for both sh and csh versions
  (inadvertently changed in ee5251a7bb).
2016-11-20 13:12:02 +01:00
95e7faf309 STYLE: use the more succinct forms for argList (issue #307)
* args[int]   vs  args.args()[int]
  * args[word]  vs  args.options()[word]
  etc.
2016-11-20 13:06:57 +01:00
7b9fde84ce STYLE: consistent naming of 'kappa' instead of 'kappaName' etc (issue #305)
- purely cosmetic (documentation) changes
2016-11-20 11:41:52 +01:00
f55b15e387 Merge branch 'master' into 'develop'
Merge master changes/bugfixes into develop branch

See merge request !78
2016-11-20 09:48:38 +00:00
7d39328b5a functionObjects::add: Add list of fields
The operation can be applied to any volume or surface fields generating a
    volume or surface scalar field.

    Example of function object specification:
    \verbatim
    Ttot
    {
        type            add;
        libs            ("libfieldFunctionObjects.so");
        fields          (T Tdelta);
        result          Ttot;
        executeControl  writeTime;
        writeControl    writeTime;
    }
    \endverbatim

Also refactored functionObjects::fieldsExpression to avoid code
duplication between the 'add' and 'subtract' functionObjects.
2016-11-19 21:48:48 +00:00
9b66285c22 Merge remote-tracking branch 'origin/externalCoupled' into develop
- update tutorial and adjust function object for updated infrastructure.
2016-11-19 18:43:34 +01:00
8b4dfe24f1 Merge remote-tracking branch 'origin/decomposeParDict' into develop 2016-11-19 15:34:36 +01:00
f021d3b665 Removed temporary file 2016-11-18 22:43:52 +00:00
0eca493cb8 functionObjects::subtract: From the first field subtract the remaining fields in the list
The operation can be applied to any volume or surface fields generating a
    volume or surface scalar field.

    Example of function object specification:
    \verbatim
    Tdiff
    {
        type            subtract;
        libs            ("libfieldFunctionObjects.so");
        fields          (T Tmean);
        result          Tdiff;
        executeControl  writeTime;
        writeControl    writeTime;
    }
    \endverbatim
2016-11-18 22:20:22 +00:00
1254be97e3 lagrangian::patchInjectionBase: corrected initialization of tetFaceI and tetPtI
Patch contributed by Timo Niemi, VTT.
Resolved bug-report http://bugs.openfoam.org/view.php?id=2286
2016-11-18 14:31:51 +00:00
ee26cbeae9 lagrangian::InjectionModel.C: Corrected indentation 2016-11-18 14:31:18 +00:00
8a9618be52 functionObjects::fieldValueDelta: Corrected documentation 2016-11-18 14:30:42 +00:00
0de810db37 viscosityModels::strainRateFunction: New run-time selected strain-rate function non-Newtonian viscosity model
Uses 'Function1' to provide support for an extensible range of run-time
selected functions including interpolation of tabulated data etc.
2016-11-17 22:33:48 +00:00
c659d99368 ENH: Check if the Lagragian cloud is active before reading massTotal & SOI in InjectionModel.C
If the cloud was inactive, massTotal and SOI were needed even for steady Lagrangian
2016-11-17 11:48:13 -08:00
4b4e912226 ENH: Adding writing of the motionSolver dictionary for sixDoFRigidBodyDisplacementPointPatchVectorField BC 2016-11-17 08:46:27 -08:00
de7b4b96a2 Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus 2016-11-17 08:41:38 -08:00
b7c370d76a Correcting header information for IDDESDelta 2016-11-17 08:41:08 -08:00
88c8297211 ENH: Porosity model - output cellZone bounds in the local co-ordinate system. Fixes #300 2016-11-17 13:35:35 +00:00
9a10efc6fa ENH: waveModel - using class varaiable instead of a static to update the model 2016-11-17 10:30:00 +00:00
ce7cc3a744 ENH: Wave code tidying 2016-11-17 08:52:15 +00:00
2d36cc97a7 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-16 16:27:36 -08:00
dbb8b04f5d ENH: Correcting Nu correlation for thermoCoupleProbes 2016-11-16 16:27:11 -08:00
d93c037914 etc/config.sh/aliases: Use 'declare' instead of 'type' for bash/zsh compatibility
Resolves bug-report http://bugs.openfoam.org/view.php?id=2333
2016-11-16 22:33:16 +00:00
ae3d2f4d57 ENH: topoSet: clear sets upon writing modified mesh. Fixes #129. 2016-11-16 14:58:46 +00:00
95dc43e5cb ENH: Updated IHCatabria test cases to use new functionality 2016-11-16 14:17:03 +00:00
95c34ea8ff INT: Initial commit for IHCantabria test cases 2016-11-16 14:14:48 +00:00
b3b0704202 ENH: Initial integration of IHCantrabria wave functionality
- Wave models significantly restructured and refactored into a hierarchy of run-time selecatable models
- Gravity no longer hard-coded
- Ability to use any direction as the gravity direction
- Boundary conditions simplified and take reference to the wave model
  - removes a lot of code duplication and new code is ~30% faster
- Removed unused functions

Requires further testing
- Restart behaviour needs to be addressed
2016-11-16 14:05:46 +00:00
95e9467e84 INT: Integration of functionality produced by The Environmental Hydraulics Institute "IHCantabria" (http://www.ihcantabria.com/en/)
Capabilities include:
- Wave generation
  - Solitary wave using Boussinesq theory
  - Cnoidal wave theory
  - StokesI, StokesII, StokesV wave theory

- Active wave absorption at the inflow/outflow boundaries based on
  shallow water theory

Authors:
- Javier Lopez Lara (jav.lopez@unican.es)
- Gabriel Barajas (barajasg@unican.es)
- Inigo Losada (losadai@unican.es)
2016-11-16 14:02:14 +00:00
d29a8afbec GIT: Resolve merge conflict 2016-11-15 10:04:08 +00:00
d2328f78cf Merge branch 'externalCoupled' into 'master'
External coupled

Improvements and bugfixes for externalCoupledFunctionObject - issues #278 #269

See merge request !72
2016-11-15 09:49:58 +00:00
b20ae1f790 Merge branch 'decomposeParDict' into 'master'
BUG: resolve some decomposeParDict problems (issues #60, #265).

- Cleanup/centralize handling of -decomposeParDict by relocating
  common code into argList. Ensures that all processes receive
  identical information about the -decomposeParDict opton.

- Only use alternative decomposeParDict for simpleFoam/motorBike
  tutorial so that this will be included in the test loop for snappy.

- Added Mattijs' fix for surfaceRedistributePar.

See merge request !73
2016-11-15 09:46:03 +00:00
f3b1676326 TurbulenceModels::ReynoldsStress: Added support for incompressible VoF solvers
and other incompressible mixture-based multiphase solvers.
2016-11-14 17:59:07 +00:00
328204dc1e TurbulenceModels::ReynoldsStress: remove the spherical part of the wall-function Reynolds stress
The spherical part of the Reynolds stress is included in the pressure so
that the wall boundary condition for the pressure is zeroGradient.

Resolves bug-report http://bugs.openfoam.org/view.php?id=2325
2016-11-14 15:03:08 +00:00
fff2ee5440 Merge branch 'surface-declutter' into 'develop'
Surface declutter - issue #294

Removing various clutter from surfMesh and triSurface
- unused classes/files (backup copies on non-release repo)
- relocate some triSurface-related classes to where they make more sense, and where they can be reused.
- improve handling of various face types in MeshedSurface and UnsortedMeshedSurface (to bridge the gap to triSurface)
- improve transfer methods for reclaiming/reusing surface allocations

See merge request !77
2016-11-14 12:43:38 +00:00
5ffdb2d4b3 wmake/scripts/AllwmakeParseArguments: Avoid duplicate command message
when Allwmake is called from wmake -all
2016-11-14 12:37:52 +00:00
aeca671672 VectorSpace: Added cmptSqr 2016-11-14 11:22:43 +00:00
5050a6cf10 wmkdep.l: Removed redundant #include 2016-11-14 11:22:00 +00:00
01a0fcb996 wclean: Removed duplicate echo of directory 2016-11-14 08:54:53 +00:00
11ee31d17a wmake: Removed redundant QUIET_OP 2016-11-14 08:39:55 +00:00
2dbfe2a75e wmake: Moved wmkdep messages into rules/General/transform makefile 2016-11-14 08:32:30 +00:00
e112eb503b ENH: provide ModifiableMeshedSurface class
- A special purpose MeshedSurface that exposes the stored values
  for direct modification.

- Its usage should be restricted to special cases where the surface
  needs modifications as an atomic operation.
2016-11-14 00:45:41 +01:00
961b653183 wmake: Suppress the "is up to date" messages
Avoids a lot of unnecessary clutter in the compilation log.
2016-11-13 22:41:42 +00:00
b50d7d78f7 wmake: Removed unnecessary '->>' line from output
Changed 'ld' line to include path of target library or executable.
2016-11-13 22:14:53 +00:00
704620aea1 ENH: simplify check for metis sizes (issue #290)
- Now that the metisDecomp uses the metis definition for float/double,
  do not need to verify the scalar sizes.

Note:
- could drop precision qualifier for metis, scotch installation
  (include, lib) as being unneeded, but it is simpler to keep them
  and continue to use the FOAM_EXT_LIBBIN path
  (in case other ThirdParty software is compiled with different
  precisions).
2016-11-13 19:53:11 +01:00
82faf7eff0 wmake: Indent the 'result' message 2016-11-13 18:42:08 +00:00
80db302666 Allwmake: Remove 'set -x' which generates a lot of noise
'set -x' should be used for debugging.

Added command printing into wmake and Allwmake as a replacement for
'set -x' to log current target.
2016-11-13 18:08:22 +00:00
5981836326 renumberMesh/Allwmake: Removed 'set -x' 2016-11-13 15:27:25 +00:00
985abe023e wmake: Declare all makefiles to be specifically GNU make files 2016-11-13 15:18:09 +00:00
8a4c43e377 wmake: suppress "Nothing to be done for" messages 2016-11-13 15:16:42 +00:00
79081ba3bb wmake: Simplified QUIET_MESSAGE function 2016-11-13 11:19:29 +00:00
8b0ec47566 wmake/src/Makefile: Removed additional $E 2016-11-13 10:24:16 +00:00
d676ccf01d wmake/rules/General/yacc: Added QUIET_MESSAGE 2016-11-13 10:23:53 +00:00
52b6c49b4f ENH: provide xfer methods for the meshed surface components.
- the surfMesh classes where originally designed with limited
  (protected) access to the underlying components. This is to
  avoid unintentional direct changes, since these can quickly
  lead to inconsistencies with the topology addressing etc.

  However, if we wish to efficiently adjust surfaces, it is useful
  to modify the components directly.
  The compromise is to provide 'xfer' methods:
    - xferFaces()
    - xferPoints()
    - xferZones()
  These transfer the contents to an Xfer container for reuse, while
  also resetting the topology addressing.  To apply the changes,
  the reset() method is used.
2016-11-12 23:42:17 +01:00
d2b4284271 BUG: all addressing not being cleared when transfer/resetting surfMesh 2016-11-14 00:42:52 +01:00
997f1713cb wmake: Update '-s' option to print the files processed without the rules
Based on patch contributed by Alexey Matveichev
Resolves feature request http://bugs.openfoam.org/view.php?id=2328
2016-11-12 22:01:44 +00:00
c56edc262c ENH: add read/write for labelledTri surfaces (issue #294)
- extends existing surfaceFormats to include surfaces with
  labelledTri as their face representation.
2016-11-12 12:05:45 +01:00
d026f90827 ENH: support writing of unsorted surface for AC3D format (issue #294)
- needed for triSurface output (when it comes)
2016-11-13 23:05:43 +01:00
b799b5d65d ENH: surfMesh support for reading compressed binary stl files (issue #294)
- increases coverage.

STYLE: relocate some core pieces into fileFormats
2016-11-13 23:04:38 +01:00
88876e46c1 ENH: better handling of various face types in MeshedSurface (issue #294)
- ensure that MeshedSurface and UnsortedMeshedSurface can also work
  with labelledTri faces.

- nTriangles() convenience method for meshed surfaces

- MeshedSurface::addZonesToFaces() method to copy zone information
  into the labelledTri per-face region storage.
  The goal is to replace the triSurface reading routines with
  run-time selectable ones from surfMesh.
2016-11-12 23:42:00 +01:00
a32eff4e59 ENH: ensure face, triFace and labelledTri all work consistently (issue #294)
- triFace() now initialized with '-1', which makes it behave
  equivalently to face(label).

- supply default region=0 for some labelledTri constructors.
  This allows labelledTri to work more like a triFace and makes it
  easier to use in templated methods and eases conversion from
  triFace to a labelledTri.

- labelledTri(const labelUList&) can now be used when converting
  from a face. It can have 3 values (use default region)
  or 4 values (with region).

- face, triFace, labelledTri now all support construction with
  initializer lists. This can be useful for certain types of code.
  Eg,
      triFace     f1{a, b, c};
      face        f2{a, b, c};
      labelledTri f3{a, b, c};

  Work without ambiguity.
  Also useful for templated methods:

      FaceType f{remap[a], remap[b], remap[c]};
2016-11-12 20:57:48 +01:00
4fbb59de5d STYLE: rename MeshedSurfaceProxyCore -> MeshedSurfaceProxys for consistency
- it doesn't actually contain 'core' code, but rather various
  instances of MeshedSurfaceProxy.
2016-11-12 20:54:50 +01:00
0b4ff45541 metisDecomp: Use real_t for processor weights
Based on patch contributed by Alexey Matveichev
Resolves feature-request http://bugs.openfoam.org/view.php?id=2330
2016-11-12 09:03:56 +00:00
28c75d8d7d BUG: Field construct from Xfer<Field> fails (issued #298)
- Cannot pass through to underlying list constructor directly.

- As this constructor was broken, there seem to be a number of
  workarounds scattered in the code. Could revisit them in the future
  as part of code-style:

      edgeMesh(const Xfer<pointField>&, const Xfer<edgeList>&);
      CompactIOField(const IOobject&, const Xfer<Field<T>>&);
      GlobalIOField(const IOobject&, const Xfer<Field<Type>>&);
      IOField(const IOobject&, const Xfer<Field<Type>>&);
2016-11-13 14:37:40 +01:00
c09c8e36c7 BUG: unallocated list in triSurface vtk reader (issue #297)
- Condition is there to catch cases where the vtkSurfaceFormat returns
  no zones (which should never be the case), but assigns a fallback
  value without first resizing.
2016-11-13 12:33:47 +01:00
eeedf4a35d DEFEATURE: remove VRML/97 output - superseded long ago by x3d (issue #294) 2016-11-12 23:30:44 +01:00
bd9626f95c DEFEATURE: remove broken OFS surfaceFormat (issue #296, #294)
- This format is fortunately little-used (or never used) since its
  inception.

  Using raw stream operators to write zones, points and faces in a
  single file was not well thought out - the output content varies
  with the Face template type (face, triFace, labelledFace), which
  makes it not very robust at all.

  The static read in OFSsurfaceFormat also has a bug - keeping
  transcribed faces from being passed through.

  Conclusion: removing it makes more sense that repairing and still
  not having something good.

  Do retain stream operators for MeshedSurface and UnsortedMeshedSurface,
  since they are useful for passing around data
  (eg, between processors), but they shouldn't be used for files.
2016-11-12 23:22:47 +01:00
d37e86d185 metisDecomp: Use real_t for processor weights
Based on patch contributed by Alexey Matveichev
Resolves feature-request http://bugs.openfoam.org/view.php?id=2330
2016-11-12 09:03:56 +00:00
48762a8c58 STLpoint: declare operator point() for double-precision only
The base-class provides the point for single-precision.
2016-11-12 09:02:51 +00:00
06f638b09d STYLE: provide WM_CC, WM_CXX values for Icc.
- since Icc is actually mentioned in bashrc/cshrc it is consistent to
  set these values accordingly.
2016-11-11 19:25:52 +01:00
1752bdc4b9 CONFIG: bump paraview version to 5.1.2 (July 2016) release 2016-11-11 19:25:25 +01:00
f6e170dcd3 foamDictionary: Corrected error message type 2016-11-11 17:21:13 +00:00
8e30111b44 DEFEATURE: drop reader module support for paraview 3.x (issue #295)
- Cannot test if these older reader modules actually build,
  owning largely to build issues since with paraview 3.14 (Feb 2012)
  and paraview 3.98 (Dec 2012) themselves.
2016-11-11 13:30:30 +01:00
23795a7fb5 PVblockMeshReader: Removed unnecessary 'UpdateGUI' button
The 'Refresh' button updates the blockMesh and the GUI.
2016-11-11 12:17:53 +00:00
fbba6cd714 blockMesh: corrected debug messages
Patch contributed by Mattijs Janssens
2016-11-11 11:19:55 +00:00
7aeaf61cda ENH: getting foamToTecplot working again
- updated code to use current API level 142.

- ThirdParty build of tecio now uses CMake.
2016-11-11 09:42:28 +01:00
a3fd21b306 Merge branch 'feature-convert' into 'develop'
Improvements to the conversion utilities

Various changes associated with issue #204.

* Reduced code duplication for handling prostar conversion and IO
* Simple conversion to/from AVL/FIRE geometries
* New library basis for conversion to/from CCM geometries - handles multiple regions, conformal interfaces etc. No support for film or 2d shell geometries
* Improved infrastructure for writing VTK content. Will propagate usage through other parts of the code in the future.

See merge request !76
2016-11-10 14:34:30 +00:00
af02ff3600 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-09 15:23:21 +00:00
2a9c95e56e BUG: surfaceAdd: incorrect size when not merging regions. Fixes #144. 2016-11-09 15:22:59 +00:00
a6665e395b Merge branch 'feature-keep-sampled-pids' into 'develop'
Feature keep sampled pids

Rebased version of merge request !58, following ticket closure for issue #104 .

See merge request !75
2016-11-09 14:58:42 +00:00
aabf0094a5 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-09 14:43:14 +00:00
0026347c0e ENH: cloudSet: report the number of missing points 2016-11-09 14:42:12 +00:00
c7d7cbca28 BUG: foamConfigurePaths -foamInstall fails (related to issue #280)
- relied on 'export' keyword, which was removed in commit b844867112

--
ENH: foamConfigurePaths support for additional items:

    -label 32|64            specify label size
    -system name            specify 'system' compiler to be used
    -thirdParty name        specify 'ThirdParty' compiler to be used

    -boost ver              specify boost_version
    -boostArchPath dir      specify BOOST_ARCH_PATH
    -cgal ver               specify cgal_version
    -cgalArchPath dir       specify CGAL_ARCH_PATH
    -clang ver              specify clang_version for ThirdParty Clang
    -cmake ver              specify cmake_version
    -fftw ver               specify fffw_version
    -fftwArchPath dir       specify FFTW_ARCH_PATH
    -metis ver              specify METIS_VERSION
    -metisArchPath dir      specify METIS_ARCH_PATH
2016-11-09 14:38:15 +01:00
3b3e19b3f3 .gitignore: Ignore emacs projectile configuration files 2016-11-09 11:23:20 +00:00
ad476af9b3 reactingEulerFoam, twoPhaseEulerFoam: Reinstated interfacial pressure-work
Added the interfacial pressure-work terms according to:

Ishii, M., Hibiki, T.,
Thermo-fluid dynamics of two-phase flow,
ISBN-10: 0-387-28321-8, 2006

While this is the most common approach to handling the interfacial
pressure-work it introduces numerical stability issues in regions of low
phase-fraction and rapid flow deformation.  To alleviate this problem an
optional limiter may be applied to the pressure-work term in either of
the energy forms.  This may specified in the
"thermophysicalProperties.<phase>" file, e.g.

pressureWorkAlphaLimit 1e-3;

which sets the pressure work term to 0 for phase-fractions below 1e-3.

For particularly unstable cases a limit of 1e-2 may be necessary.
2016-11-09 11:14:26 +00:00
5e69858283 foamTags: Rationalized tagging
The best of the current options is to use the latest version of
exuberant ctags (which has a new C++ parser) to generate both
declaration and definition tags.

gtags works to some extent and provides additional information about the
function signatures but the C++ parser is not accurate and misses scope
information.  gtags can be used with the ctags parser which is effective
but looses the primary advantage of gtags being able to provide function
signatures so support has been switched-off by default.

ebrowse does not appear to be very useful for traversing the OpenFOAM
class tree and the support has been switched-off by default.
2016-11-09 11:07:29 +00:00
b048cacc7b ENH: robuster handling of system or central installation (issue #290)
- Follow similar pattern as per boost/CGAL with the '*-none' to disable,
  and '*-system' for system installations.

  Also support central non-ThirdParty installations by specifying the
  version as "*-system", but also providing the fully qualified
  *_ARCH_PATH too.

--
ENH: Verify label and scalar sizes used in the metis header.

- ensure they match with expected values, which can be obtained via
  the OpenFOAM definitions for WM_LABEL_SIZE and WM_PRECISION_OPTION
2016-11-09 11:10:53 +01:00
66678267dc Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-09 09:24:15 +00:00
6be5816815 STYLE: snappyHexMeshDict: duplicate information. Fixes #286. 2016-11-09 09:23:46 +00:00
b06c4280c7 Revert "twoPhaseEulerFoam::EEqns: Updated pressure-work"
This reverts commit f7996e45a0.
2016-11-09 08:44:36 +00:00
0c02a265a2 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-08 14:37:55 +00:00
a95bf1be58 COMP: Minor edit to avoid compiler warning 2016-11-08 14:37:39 +00:00
407a47572e ENH: thermoCoupleProbes - store properties under FO name to avoid clashes with other instances 2016-11-08 14:37:01 +00:00
57d81c179c BUG: runTimePostProcessing - updated due to changes in stateFunctionObject 2016-11-08 14:36:14 +00:00
f7996e45a0 twoPhaseEulerFoam::EEqns: Updated pressure-work
See commit b5206472b5
2016-11-07 23:14:13 +00:00
cb872a90af Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-07 14:25:55 +00:00
9d63e7f78c ENH: cloudSet: report missing samples. (fixes #228) 2016-11-07 14:15:27 +00:00
6ef91c9489 ENH: cloudSet: report missing samples. (fixes #22) 2016-11-07 14:15:27 +00:00
a20a17f54b Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-07 09:29:36 +00:00
82fd902b3e ENH: snappyHexMeshDict: fix comment 2016-11-07 09:29:22 +00:00
a06cef31fa functionObjects::yPlus: Call read() in constructor to set base-class controls
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2320
2016-11-06 10:31:07 +00:00
da3deb60c8 kOmegaSSTBase: Corrected read() to re-read the base-class settings
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2318
2016-11-05 23:25:58 +00:00
74cfb6bf34 PVblockMeshReader: Remove old vertex labels on refresh 2016-11-05 21:41:32 +00:00
fe415ff8f7 Cloud: Added 'td.switchProcessor' check to processor transfer logic
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2315
2016-11-05 21:16:22 +00:00
fb95a08e20 indexedOctree: Corrected comment
Resolves bug-report http://bugs.openfoam.org/view.php?id=2319
2016-11-05 21:00:16 +00:00
c9a8ff349f foamTags: Changed ectags -> ctags-exuberant
ctags-exuberant is now the more common name for the exuberant ctags
program.

Commented-out gtags as it is not commonly available.
2016-11-05 18:31:19 +00:00
0ed96603d4 driftFluxFoam: Corrected Udm BCs
Added 'READ_IF_PRESENT' option to support overriding of the default BCs
for complex problems requiring special treatment of Udm at boundaries.

Resolves bug-report http://bugs.openfoam.org/view.php?id=2317
2016-11-05 18:17:24 +00:00
a21c3d6332 PVblockMeshReader: Added "Refresh" button to update the blockMesh
Reconstructs the blockMesh and updates the display from the current
blockMeshDict so that any changes can viewed without exiting
paraFoam -block
2016-11-04 20:50:13 +00:00
1f2ba25184 STYLE: inconsistency in scotch, metis library locations (issue #290)
- Only reference the FOAM_EXT_LIBBIN locations when linking.
  The respective SCOTCH_ARCH_PATH/lib, METIS_ARCH_PATH/lib locations
  either do not exist, or are possibly inconsistent and won't be
  seen at run-time anyhow.

- Incorporate decompose/metisDecomp/Allwmake into the top-level
  decompose/Allwmake
2016-11-04 20:01:44 +01:00
3ab919d407 paraFoam -block: Added support for vertex and block names
Patch contributed by Mattijs Janssens
2016-11-04 17:29:02 +00:00
7781656347 pointConstraint: Added constrainDisplacement
which directly applies the constraint to the displacement without
external tensor ops.

Patch contributed by Mattijs Janssens
2016-11-04 17:13:04 +00:00
9efe94407f foamLog: Added clockTime
Patch contributed by Paul Edwards, Intel
2016-11-04 14:33:47 +00:00
535831422e etc/bashrc: Added support for sourcing etc/bashrc with relative path
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2310
2016-11-04 13:12:30 +00:00
91d5efdc38 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-04 12:28:32 +00:00
78964897ce BUG: readFields function object - corrected reading of fields from file. Fixes #289 2016-11-04 12:28:28 +00:00
b5206472b5 reactingEulerFoam: Corrected and rationalized pressure-work
In many publications and Euler-Euler codes the pressure-work term in the
total enthalpy is stated and implemented as -alpha*dp/dt rather than the
conservative form derived from the total internal energy equation
-d(alpha*p)/dt.  In order for the enthalpy and internal energy equations
to be consistent this error/simplification propagates to the total
internal energy equation as a spurious additional term p*d(alpha)/dt
which is included in the OpenFOAM Euler-Euler solvers and causes
stability and conservation issues.

I have now re-derived the energy equations for multiphase flow from
first-principles and implemented in the reactingEulerFoam solvers the
correct conservative form of pressure-work in both the internal energy
and enthalpy equations.

Additionally an optional limiter may be applied to the pressure-work
term in either of the energy forms to avoid spurious fluctuations in the
phase temperature in regions where the phase-fraction -> 0.  This may
specified in the "thermophysicalProperties.<phase>" file, e.g.

pressureWorkAlphaLimit 1e-3;

which sets the pressure work term to 0 for phase-fractions below 1e-3.
2016-11-04 12:07:09 +00:00
e8f6099a1f COMP: Newer CGAL versions break current CGAL wmake rules (issue #288)
On 64-bit systems, the system installations of boost, cgal are under
lib64/. The behaviour for a ThirdParty build is mostly lib/ but this
can also be changing.

    Boost 1_62_0 and older build into 'lib/'.
    CGAL-4.9 builds into 'lib64/', older versions into 'lib/'.

Future-proof things by using lib$WM_COMPILER_LIB_ARCH for boost and
cgal build rules, and forcing these as build targets in the ThirdParty
makeCGAL as well.

--
STYLE: check for boost/version.hpp, CGAL/version.h instead their directories
2016-11-04 12:05:35 +01:00
55d3950b12 BUG: mesh reader does not preserve physicalType (closes #287)
- was incorrectly writing it as "startFace", which would be
  immediately overwritten anyhow

STYLE: avoid noisy output when adding the boundary 'type' in mesh conversion.
2016-11-03 15:09:22 +01:00
d2fc2c9edc ENH: improved infrastructure for writing VTK content
Note: classes are prefixed with 'foamVtk' instead of 'vtk' to avoid potential
conflicts with VTK itself.

foamVtkCore
~~~~~~~~~~~
- General very low-level functionality.

foamVtkPTraits
~~~~~~~~~~~~~~
- Traits type of functionality for VTK

foamVtkOutputOptions
~~~~~~~~~~~~~~~~~~~~
- The various format output options as a class that can be passed to
  formatters etc.

foamVtkCells
~~~~~~~~~~~~
- Intended for unifying vtkTopo and PV-Reader code in the future.
- Handles polyhedron decompose internally etc

foamVtkOutput, foamVtkFormatter
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
- Output helpers.
- Selector for individual formatters.
  Currently write all scalar data a 'float' (not 'double'). Can
  revisit this in the future.
2016-11-03 14:24:00 +01:00
82f9089b6a Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-03 12:12:35 +00:00
e3420b8a27 STYLE: Corrected typo 2016-11-03 12:12:27 +00:00
c4c57690c6 ENH: function objects - use Info on construction/read, and Log for all other messages 2016-11-03 12:11:20 +00:00
f0107b47f5 Merge branch 'ensight-preview' into 'develop'
Reworking of the ensight infrastructue and new ensightWrite function object



See merge request !70
2016-11-03 08:24:52 +00:00
15047d60ae Merge branch 'surface-area' into 'develop'
Provide common face area/normal support in PrimitivePatch

For polyPatch, both the faceAreas() and faceCentres() are masked by their subField equivalents.
Since there is no polyPatch method for magFaceAreas(), the PrimitivePatch method will be seen.

See merge request !74
2016-11-03 08:20:43 +00:00
c299b89ff8 STYLE: note new magSf() for use in surfaceNoise
- still needs to be applied and tested
2016-11-03 08:05:31 +01:00
54c40e7393 ENH: consistent output format for coupled geometry description (issue #278)
- In the corner case with few faces or points, the normal List I/O
  results in a compact list representation.

  This is less than desirable for external programs with simple
  line-based parsers.

- Write exactly the following

*Faces*
// Patch: <word-Region> <word-Patch>
<int-nFaces>
(
<int-faceSize>(<int> .. <int>)
...
)

*Points*
// Patch: <word-Region> <word-Patch>
<int-nPoints>
(
(<float-x> <float-y> <float-z>)
...
)

STYLE: only use serial form of createExternalCoupledPatchGeometry in tutorial

- less confusing for the user, who wonders why it is being done twice.
2016-11-02 17:26:25 +01:00
40252e99aa COMP: surfaceCheck: edgei vs edgeI 2016-11-02 14:55:13 +00:00
b6ecddedaf Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-02 14:48:25 +00:00
e8e0cfb416 ENH: mergeMeshes: in parallel make sure to put processor patches last. Fixes #239 2016-11-02 14:47:55 +00:00
880c136af4 ENH: applyBoundaryLayer - simplified setting of internal velocity field 2016-11-02 13:06:53 +00:00
ac49daaf4d Merge remote-tracking branch 'origin/develop' into develop
Conflicts:
	applications/utilities/surface/surfaceCheck/surfaceCheck.C
2016-11-02 12:06:05 +00:00
40ed1952c3 ENH: noise models - enable the use of environment variables in input file names. Fixes #285 2016-11-01 20:51:51 +00:00
b9d5e5bab1 STYLE: tutorial updates 2016-11-01 16:55:58 +00:00
74194c8391 STYLE: forces FO - updated to form that does not create a file ptr by default 2016-11-01 16:49:50 +00:00
d3f0cb33d9 BUG: forces FO - corrected after bugs introduced by last merging effort 2016-11-01 16:36:15 +00:00
b4b4e1a02c buoyantBoussinesqSimpleFoam: Correct laminar and turbulent Prandtl numberl
Resolves bug-report http://bugs.openfoam.org/view.php?id=2314
2016-11-01 16:07:52 +00:00
c10177fc6f BUG: writeFile - fileName was not set after last merge 2016-11-01 16:05:18 +00:00
7c76819f39 STYLE: re-applied Sergio's restructuring of interDyMFoam tutorials 2016-11-01 15:57:58 +00:00
f80e5164d8 ENH: Tutorial corrections 2016-11-01 15:40:27 +00:00
99151638e3 STYLE: moved les tut file to LES directory 2016-11-01 15:36:11 +00:00
40b8f365b5 STYLE: moved ras tut case to RAS directory 2016-11-01 15:33:19 +00:00
adaa14a8d9 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-11-01 14:46:56 +00:00
d709dce799 ENH: DEShybrid - exposed threshold limit for B function to user. Patch contributed by Marian Fuchs 2016-11-01 14:46:51 +00:00
902f333b06 BUG: VectorSpaceI.H - corrected invalid code 2016-11-01 14:41:11 +00:00
c499de996b ENH: Removed unused file 2016-11-01 14:29:20 +00:00
9a155dd0d5 blockMesh: Added edge projection
New functionality contributed by Mattijs Janssens:
  - new edge projection: projectCurve for use with new geometry
    'searchableCurve'
  - new tutorial 'pipe'
  - naming of vertices and blocks (see pipe tutorial). Including back
    substitution for error messages.
2016-10-31 18:00:15 +00:00
d8e9decdcc etc/config.csh/paraview: avoid ParaView_DIR: Undefined variable.
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2309
2016-10-31 15:49:19 +00:00
46b8bfb25f codedFunctionObject.H: Corrected docs
Resolved bug-report http://bugs.openfoam.org/view.php?id=2313
2016-10-31 15:45:59 +00:00
1b1b2ba2b7 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-10-31 08:43:38 -07:00
83028b94b9 ENH: Adding outletMappedUniformInletHeatAddition 2016-10-31 08:42:43 -07:00
c90e6ed48c ENH: surfaceCheck: additional printing. Additional self-intersect test with reverse ray 2016-10-31 15:41:34 +00:00
e0574c471f chemFoam: Construct fields on the mesh database for consistency 2016-10-31 13:15:48 +00:00
4bcb0d71ca ENH: Provide boundary field writeEntries method (issue #283)
- Write the individual contents, without a surrounding 'boundaryField'
  block. Similar to what dictionary::writeEntries() offers.
2016-10-31 13:09:54 +01:00
a6918385b7 reactingEulerFoam: Correct continuity error at the end of the energy correction loop
to handle the change in density generated by the temperature correction.
2016-10-31 08:23:51 +00:00
c836a017e6 ENH: allow specific restart time for field averaging (issue #282)
- Can currently have a periodic restart, but for simulations with a
  known run-up, it can be useful to have a specific time to restart
  the averaging.

- Note that the restartTime acts as a 'single-shot'. If the
  restartTime is already in the past when a simulation is started, it
  is ignored. If, during a simulation, the restartTime is crossed, it
  will be triggered and then set itself to be ignored in the future.
2016-10-31 08:26:06 +01:00
a05493db41 CONFIG: csh not unsetting old paraview/cmake environment (related to #281)
- On the first call, ParaView_DIR is unset and thus the clean-path
  fails with the warning "ParaView_DIR: Undefined variable."

  This looks messy, but is of no _major_ consequence since paraview
  doesn't need to be removed anyhow. The only slight risk is that the
  path to a third-party cmake might not be cleaned.

- Patch as per Bruno's suggestion.
2016-10-31 07:00:57 +01:00
18d2b2e0c8 etc/cshrc: Removed echo $FOAM_INST_DIR 2016-10-30 09:38:23 +00:00
429ca91216 etc/config: Removed references to gcc versions < 4.8
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2312
2016-10-30 00:01:48 +01:00
b844867112 BUG: etc/bashrc incorrect behaviour if sourced locally (issue #280)
- It is incorrect to prefix the assignment with an 'export' since this
  automatically marks the overall command as successful and circumvents
  the fallback.

  There is no simple way to have proper behaviour when sourced with a
  local directory path, but at least it now uses the fallback.

  It is still easy to wreak the mechanism with valid but confusing input.
  For example,

     ". /path/to/openfoam/etc/././bashrc"

  The only real certainty is that "${BASH_SOURCE%/*}"
  should point to the 'etc/' directory. In which case,

      cd ${BASH_SOURCE%/*}    # <- now in the etc/ directory
      pwd=$(pwd -P)           # <- fully-qualified path to etc/
      pwd=${pwd%/*/*}         # <- up two parent levels

  - This works with ". ./bashrc", but fails with ". bashrc"
    (probably not so common).
  - Con: The construct requires an additional sub-shell.
2016-10-28 16:48:30 +02:00
00939bcba9 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-10-28 14:56:16 +01:00
a224366c28 BUG: etc/bashrc - use \cd to avoid problem when cd is aliased. Fixes #280 2016-10-28 14:55:46 +01:00
be2a4319bd STYLE: rationalize tutorial CleanFunctions (related to issue #279)
- include cleanup of other postProcessing directories:
  * Ensight, EnSight, ensightWrite

- don't need to remove files that cleanSnappyFiles already removed:
  * 0/cellLevel 0/pointLevel

- bundle removal of constant/ items together:
  * constant/cellDecomposition constant/polyMesh constant/tetDualMesh
2016-10-28 13:23:13 +02:00
9ab0406b47 BUG: tutorial RunFunctions ignore non-standard decomposeParDict (issue #279) 2016-10-28 13:22:19 +02:00
a4ac4ac268 STYLE: Tutorial cleanup 2016-10-28 12:16:29 +01:00
f2ce1fa9ac twoPhaseEulerFoam::twoPhaseSystem: Ensure inlet flow of BOTH phases matches the BCs
Previously the inlet flow of phase 1 (the phase solved for) is corrected
to match the inlet specification for that phase.  However, if the second
phase is also constrained at inlets the inlet flux must also be
corrected to match the inlet specification.
2016-10-28 10:50:10 +01:00
aca0b1ca04 COMP: ensight writer compilation for 64-bit labels (issue #263)
GIT: added missing source file.

ENH: add tutorial example under incompressible/simpleFoam/motorBike
2016-10-28 11:49:05 +02:00
053b22a969 STYLE: incorrect project setting in etc/bashrc 2016-10-28 10:38:48 +02:00
19758c666f ENH: Adding lumpedMassWallTemperature BC and adding usage tutorial in buoyantPimpleFoam/hotRoom 2016-10-27 15:06:42 -07:00
aace62a1b8 Revert "VectorSpace: Added printing of out-of-range index"
This reverts commit d881d2afe6.
2016-10-27 20:57:10 +01:00
2ba5a7c3bc Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-10-27 08:50:38 -07:00
ccf3b9db13 BUG: Changing init for thermocouple FO. Changing radiation.correct in fireFoam to allow
correct case re-start
2016-10-27 08:49:47 -07:00
91459881a3 ENH: streamLineBase - set tracking velocity field name to U by default 2016-10-27 16:15:43 +01:00
99c62425a9 ENH: streamLineBase - set tracking velocity field name to U by default 2016-10-27 16:15:26 +01:00
b2ee629a94 BUG: removed oddness in pointer allocations (ensight parts).
- manifest in some parallel operations.

STYLE: update foamToEnsight, foamToEnsightParts to use C++ initializer_list

- avoid warning message when removing a non-existent directory (ensight output).
2016-10-27 15:11:30 +02:00
50b80aa1b8 MRG: Resolved git conflict 2016-10-27 10:06:35 +01:00
bc03c94f4e ENh: Adding clone member to sixDoFSolvers 2016-10-26 14:53:26 -07:00
d5a9fea36e Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus 2016-10-26 11:56:31 -07:00
f223e8c6f0 ENH: Changing radiation correct in YEEq.H in fireFoam.
Adding clone member functions to motion solvers
2016-10-26 11:45:57 -07:00
f4d80786eb Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-10-26 08:31:08 -07:00
aa0b3934b0 ENH: snappyHexMeshDict: improved comment 2016-10-26 16:03:41 +01:00
efb7cd84f3 Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus 2016-10-26 15:55:24 +01:00
a992eafb9f Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-10-26 15:54:11 +01:00
5488298771 ENH: effectivenessHeatExchangerSource - calculate upstream average temperature by default 2016-10-26 15:54:03 +01:00
708bfda5cb MRG: Resolve conflict when merging branch merge-foundation 2016-10-26 15:48:39 +01:00
af81184ecf MRG: Resolve conflict with latest foundation merge 2016-10-26 15:37:15 +01:00
3b96a557e2 CONFIG: remove non-POSIX use of 'type' (issue #176)
- In the foundation version they introduced a construct to handle
  the transition from 'wmRefresh' as an alias to 'wmRefresh' as
  a shell function. This transition is unnecessary for OpenFOAM+
  since 1606 used wmREFRESH (not wmRefresh) as an alias.

  For portability it is important to avoid this non-POSIX
  "type -t". It causes issues with dash and with zsh
  (mentioned in issue #277).

        type -t dash  ->   -t: not found
        type -t zsh   ->  zsh: bad option: -t

Note: zsh users may still noticed other problems.
For example, the POSIX 'unset -f' normally has no output, but in zsh
it reports an error and has exit code 1 if the function was not
previously defined. Whereas in POSIX (including bash, dash) it only
returns non-zero if the name(s) could not be unset.
2016-10-26 12:14:11 +02:00
a375d6b2ed solidRegionDiffNo: Include the boundary faces in the calculation of the diffusion number
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2303
2016-10-25 18:33:59 +01:00
52d0289ee1 BUG: resolve some decomposeParDict problems (issues #60, #265).
- Cleanup/centralize handling of -decomposeParDict by relocating
  common code into argList. Ensures that all processes receive
  identical information about the -decomposeParDict opton.

- Only use alternative decomposeParDict for simpleFoam/motorBike
  tutorial so that this will be included in the test loop for snappy.

- Added Mattijs' fix for surfaceRedistributePar.
2016-10-25 18:19:19 +02:00
d881d2afe6 VectorSpace: Added printing of out-of-range index
Patch contributed by Mattijs Janssens
2016-10-25 17:08:11 +01:00
8a87558577 foamCleanPath: Changed sed delimiter from '@' to '|' to allow Email addresses
Patch contributed by Bruno Santos
http://bugs.openfoam.org/view.php?id=2306
2016-10-25 17:06:59 +01:00
3d5fb08693 ENH: provide separate geometry description per region/patch (issue #278)
- Also fixed bug noted in issue #269

- Previous implementation had all faces together, which made
  it difficult (impossible) for external applications to
  figure out which geometry was being referred to.

- Provide separate region/patches as follows:

    // Patch: <regionName> <patchName>

  For example,

    // Group: coupleGroup
    // Patch: heater minY
    8( ... )

  The region-name is always present, even if there is only one region.

- This change is a partial reversion to the behaviour in 2.4.x, except
  that we can now also handle multi-region geometries.

  Changing the leading comment from "# " to "// " facilitates parsing
  of the files with OpenFOAM itself if necessary.
2016-10-25 15:43:46 +02:00
8e2b13386b ENH: enable 'status=done' when finishing an externalCoupled FO
- This provides a mechanism for the external code to detect when
  OpenFOAM is done.

- Adjust tutorial to use the mechanism. Also test in parallel.
2016-10-25 15:43:27 +02:00
567e1f2dbf ENH: Tutorial update 2016-10-25 14:26:20 +01:00
85e2b7e94b BUG: thermoCoupleProbes - can only create the solver after setting the number of samples 2016-10-25 14:25:40 +01:00
196a4ea4e5 ENH: setTimeStep: adjust timestep for adjustableRunTime writeInterval. Fixes #268. 2016-10-24 13:07:51 +01:00
2f2fa53b09 ENH: thermoCoupleProbes - simplified initialisation 2016-10-21 17:02:07 +01:00
3c9e050d6e ENH: stateFunctionObject - separated dictionary access and updated api to return result status for retrieving properties 2016-10-21 17:01:35 +01:00
1b51b7743b blockMesh::projectEdge: Added support for point position adjustment
Re-positions points after projection to correct distribution

Patch contributed by Mattijs Janssens
2016-10-21 12:10:48 +01:00
eed875e1fa primitiveMeshEdges: Added support for edges with duplicate vertices
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2301
2016-10-21 12:08:18 +01:00
fb0b764466 STYLE: Documentation updates 2016-10-20 11:08:50 +01:00
bfaa9da93c SpalartAllmarasDES: Recalculate fv1 for the update of nut
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2292
2016-10-20 09:08:48 +01:00
2857e9512f ENH: propagate face area to sampling (issue #266)
- make top-level Sf(), magSf(), Cf() pure virtual since the
  sub-classes will always be providing the face/point storage,
  with either triSurface or MeshedSurface in the background
2016-10-20 08:58:27 +02:00
fb9f93dd7c ENH: propogate face area support into surface-type meshes (issue #266)
* MeshedSurface / surfMesh / triSurface

- use shorter method names similar to those from volume meshes:

      Sf(), magSf(), Cf()

  instead of the longer ones from PrimitivePatch:

      faceAreas(), magFaceAreas(), faceCentres()

- similar names throughout to ease switching between triSurface and
  MeshedSurface storage.
2016-10-20 08:36:02 +02:00
caba74dcfa ENH: add face area support into PrimitivePatch (issue #266) 2016-10-20 08:32:05 +02:00
95347013a8 ENH: function object clean-up 2016-10-19 15:28:55 +01:00
22dfcb7bc6 sixDoFSolvers::symplectic: Removed the restriction on outer iteration
Resolves bug-report http://bugs.openfoam.org/view.php?id=2297
2016-10-19 15:10:52 +01:00
4408d47075 MRG: Merged develop branch and resolved conflicts 2016-10-19 13:33:00 +01:00
fdf326f88c blockMesh: Update the curved-edge consistency checking
Loop over the edges of each block rather than the edgeList of the
topological mesh due to problems with calcEdges for blocks with repeated
point labels
2016-10-19 13:28:56 +01:00
e24917a7af Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-10-19 13:20:52 +01:00
a7bdbccaed STYLE: Corrected typo 2016-10-19 13:20:18 +01:00
509517e996 ENH: gmshToFoam: Updated for line entries 2016-10-19 13:20:02 +01:00
3c496ae4c7 ENH: noiseModel: Updated check for uniform time step size 2016-10-19 13:19:34 +01:00
9d21d5b55b Merge branch 'merge-foundation' of develop.openfoam.com:Development/OpenFOAM-plus into merge-foundation 2016-10-19 11:52:49 +01:00
b8bb55507e ENH: Coded fvOption - updated construction of the redirectFvOption to simplify user input 2016-10-19 11:52:00 +01:00
08d78d47ef blockMesh: Added checks for duplicate and unmatched curved-faces 2016-10-19 09:54:19 +01:00
175c7744c0 STYLE: adjust mergePoints to ease adoption of different list types (issue #250)
- A preliminary minor adjustment only.
2016-10-19 10:42:47 +02:00
7c10b89a56 Merge branch 'initialier_list-updates' into 'merge-foundation'
ENH: Support more C++11 initializer lists (issue #261)

DynamicList
-----------
  - construction, assignment and append

HashSet
-------
  - construction, insert, set.
  - assignment will use the implicit List constructor

hashedWordList
--------------
  - construction, assignment
  - additional sort() and uniq() methods.
  - Readonly access to HashTable information via lookup() method.
  - NB: could avoid 'const char**' constructors in the future


Some tests are included

See merge request !67
2016-10-18 19:31:45 +01:00
1967fd3dad ENH: Support more C++11 initializer lists (issue #261)
DynamicList
-----------
  - construction, assignment and append

HashSet
-------
  - construction, insert, set.
  - assignment will use the implicit List constructor

hashedWordList
--------------
  - construction, assignment
  - additional sort() and uniq() methods.
  - Readonly access to HashTable information via lookup() method.
  - NB: could avoid 'const char**' constructors in the future
2016-10-18 20:08:37 +02:00
d2b96d88da foamDictionary: Added '-diff <dict>' option
- Write differences with respect to the specified dictionary
    (or sub entry if -entry specified)

  - Write the differences with respect to a template dictionary:
      foamDictionary 0/U -diff $FOAM_ETC/templates/closedVolume/0/U

  - Write the differences in boundaryField with respect to a
    template dictionary:
      foamDictionary 0/U -diff $FOAM_ETC/templates/closedVolume/0/U \
        -entry boundaryField

Patch contributed by Mattijs Janssens
2016-10-18 18:23:24 +01:00
7a5dff9167 Merge branch 'endian_base64' into 'merge-foundation'
Common endian handling. Provide base64 output encoding.



See merge request !71
2016-10-18 17:05:18 +01:00
919c486871 blockMesh: Added check for duplicate curved-edge definitions 2016-10-18 15:18:52 +01:00
3773db53e9 blockMesh: Added projected vertices and edges
Patch contributed by Mattijs Janssens

    - Added projected vertices
    - Added projected edges
    - Change of blockEdges API (operate on list lambdas)
    - Change of blockFaces API (pass in blockDescriptor and blockFacei)
    - Added sphere7ProjectedEdges tutorial to demonstrate vertex and edge projection
2016-10-18 14:06:23 +01:00
b84618a3c8 blockMesh: Added check for curved-edge/block-edge consistency 2016-10-18 13:05:20 +01:00
03b5d5c108 BUG: foamCleanPath problem if path contains @ (closes #264)
- Can occur with some user names, or mounted paths.
  Resolve by using '?' for the separation character.

  Since '?' is a shell-glob, it is highly unlikely to occur appear in
  filenames.  Additionally, it is not a meta-character in standard sed,
  nor in the GNU extension (which uses '\?').
2016-10-18 09:52:37 +02:00
fe6ea956f7 COMP: compile issue with gcc-5.2 (closes #273)
- Superfluous #include "FieldFunctions.H" provokes warnings/errors
  with newer gcc.
2016-10-17 21:50:30 +02:00
cfe909d77b inletOutletTotalTemperature,waveTransmissiveFvPatchField: default psi -> thermo:psi
Resolves bug-report http://bugs.openfoam.org/view.php?id=2294
2016-10-17 19:12:55 +01:00
39c1722ec3 BUG: Corrected error from commit C45d092f when converting namespaces 2016-10-17 13:19:45 +01:00
4ee8ba4ae6 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-10-17 12:28:33 +01:00
82c3eed531 BUG: snappyHexMesh: findCellZoneTopo was copying same value but still setting
changed flag which caused infinite while loop. Background info:
- findCellZoneTopo tries to find for all named surface intersections
which side of the face is in the faceZone
- i.e. it tries to make the cellZone consistent with the faceZone
(to fix small problems)
- this had some logic to assign the neighbour cellZone to the owner cellZone
- which didn't check for the neighbour being the same value as the owner
- but still set a 'changed' flag which caused the loop to never end.
2016-10-17 12:25:03 +01:00
c4a4c38858 ENH: subTriSurfaceMesh: fixed comment 2016-10-17 12:24:11 +01:00
33d9b7e867 Add base64 encoding layer (issue #272)
- Can be attached to any currently open std::ostream.
2016-10-17 12:05:29 +02:00
2c06a905ab Cleanup endian support (closes #271)
- Place common code under OSspecific.

By including "endian.H", either one of WM_BIG_ENDIAN or WM_LITTLE_ENDIAN
will be defined.

Provides inline 32-bit and 64-bit byte swap routines that can be
used/re-used elsewhere.

The inplace memory swaps currently used by the VTK output are left for
the moment pending further cleanup of that code.
2016-10-17 12:02:01 +02:00
dccee2bae7 tutorials/mesh/blockMesh/sphere7: New 7-block sphere mesh example
Contributed by Georg Skillas
2016-10-16 15:14:26 +01:00
550206b5fd blockMesh::BSplineEdge: Updated #ifndef BSplineEdge_H to #ifndef blockEdges_BSplineEdge_H 2016-10-15 14:31:06 +01:00
2339d607ee blockMesh: Added support for run-time selectable methods to set the block vertex locations 2016-10-15 14:24:36 +01:00
d750eb4e5c GIT: remove vagabond files from compartmentFire tutorial 2016-10-14 10:26:20 +02:00
009203188f blockMesh: New experimental support for projecting block face point to geometric surfaces
For example, to mesh a sphere with a single block the geometry is defined in the
blockMeshDict as a searchableSurface:

    geometry
    {
        sphere
        {
            type searchableSphere;
            centre (0 0 0);
            radius 1;
        }
    }

The vertices, block topology and curved edges are defined in the usual
way, for example

    v 0.5773502;
    mv -0.5773502;

    a 0.7071067;
    ma -0.7071067;

    vertices
    (
        ($mv $mv $mv)
        ( $v $mv $mv)
        ( $v  $v $mv)
        ($mv  $v $mv)
        ($mv $mv  $v)
        ( $v $mv  $v)
        ( $v  $v  $v)
        ($mv  $v  $v)
    );

    blocks
    (
        hex (0 1 2 3 4 5 6 7) (10 10 10) simpleGrading (1 1 1)
    );

    edges
    (
        arc 0 1 (0 $ma $ma)
        arc 2 3 (0 $a $ma)
        arc 6 7 (0 $a $a)
        arc 4 5 (0 $ma $a)

        arc 0 3 ($ma 0 $ma)
        arc 1 2 ($a 0 $ma)
        arc 5 6 ($a 0 $a)
        arc 4 7 ($ma 0 $a)

        arc 0 4 ($ma $ma 0)
        arc 1 5 ($a $ma 0)
        arc 2 6 ($a $a 0)
        arc 3 7 ($ma $a 0)
    );

which will produce a mesh in which the block edges conform to the sphere
but the faces of the block lie somewhere between the original cube and
the spherical surface which is a consequence of the edge-based
transfinite interpolation.

Now the projection of the block faces to the geometry specified above
can also be specified:

    faces
    (
        project (0 4 7 3) sphere
        project (2 6 5 1) sphere
        project (1 5 4 0) sphere
        project (3 7 6 2) sphere
        project (0 3 2 1) sphere
        project (4 5 6 7) sphere
    );

which produces a mesh that actually conforms to the sphere.

See OpenFOAM-dev/tutorials/mesh/blockMesh/sphere

This functionality is experimental and will undergo further development
and generalization in the future to support more complex surfaces,
feature edge specification and extraction etc.  Please get involved if
you would like to see blockMesh become a more flexible block-structured
mesher.

Henry G. Weller, CFD Direct.
2016-10-13 15:05:24 +01:00
12d0707b84 foamCleanTutorials: Simplified cleaning the mesh by removing the constant/polyMesh directory 2016-10-13 15:02:32 +01:00
7edc2495e0 twoPhaseEulerFoam, reactingTwoPhaseEulerFoam: Corrected support for implicitPhasePressure with nAlphaCorr > 1
Resolves bug-report http://bugs.openfoam.org/view.php?id=2290
2016-10-12 18:43:18 +01:00
eb5e2c923c snappyHexMesh: Added support for scotch redistribution
Requires scotch-6.?.?
2016-10-12 16:28:26 +01:00
e08c9ab8b7 reactingTwoPhaseEulerFoam wallBoiling.* tutorials: only run start-up in test-mode 2016-10-11 08:44:36 +01:00
8dd18cc077 vtkPVblockMeshConvert: Updated to use the new blockDescriptor::edgesPointsWeights 2016-10-09 17:52:52 +01:00
e53520ecbf blockMesh::blockDescriptor: Generate the edge points and weights on demand 2016-10-09 15:16:41 +01:00
2997bfbdfd etc/config.*/unset: unset FOAM_ETC
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2285
2016-10-09 15:15:29 +01:00
42c2e6baca wmake/rules/General/transform: added filter for third-party paths
Resolves bug-report http://bugs.openfoam.org/view.php?id=2283
2016-10-09 15:14:19 +01:00
3ea71fb56a foamToTecplot360: Updated to use tmp.ref()
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2288
2016-10-09 15:13:50 +01:00
50b549f368 blockMesh: rationalizing class and member names 2016-10-08 19:48:39 +01:00
da70f6734a blockMesh: Simplify reading of curvedEdges 2016-10-07 20:31:36 +01:00
ec5eec3a27 Allrun modification for compartmentFire tutorial 2016-10-07 12:02:24 -07:00
d2c53f354e Merge branch 'merge-foundation' of develop.openfoam.com:Development/OpenFOAM-plus into merge-foundation 2016-10-07 11:57:29 -07:00
6a8948bb4f Changing permissions 2016-10-07 11:56:11 -07:00
be148fa44f File styles and permissions 2016-10-07 11:54:11 -07:00
97c0acd643 ENH: Adding compartmentFire and thermo pyrolysis model 2016-10-07 11:46:51 -07:00
53faca832d Merge branch 'merge-foundation' of develop.openfoam.com:Development/OpenFOAM-plus into merge-foundation 2016-10-07 10:20:45 -07:00
b9b2ac694a ENH: Adding eddyDissipationDiffusionModel, thermocouple probe and thermocoupleTestCase 2016-10-07 10:17:43 -07:00
91ed12d91c ENH: update nacaAirfoil tutorial to use prostar4 mesh
- Replaces prostar3 mesh format, which we no longer support.
- Update initial conditions to use regex and include file.
2016-10-07 19:11:50 +02:00
8f22c5d1ec movingWallVelocityFvPatchVectorField: Removed incorrect documentation concerning MRF
Resolves bug-report http://bugs.openfoam.org/view.php?id=2287
2016-10-07 17:38:17 +01:00
70be3aa189 foamDictionary: New '-remove' to remove a dictionary entry
Patch contributed by Mattijs Janssens
2016-10-07 17:35:39 +01:00
ba6f59a79e ENH: provide isParallel test in RunFunctions
- allows writing Allrun scripts that can be easily tested in
  serial or parallel
2016-10-07 18:00:00 +02:00
9ae5e37a63 ENH: residuals function object - store results for further processing 2016-10-07 14:21:00 +01:00
76742baf40 GIT: Resolved conflict 2016-10-07 12:27:03 +01:00
8ff2e8f14d BUG: Corrected assignment to reference object 2016-10-07 12:26:09 +01:00
9df2523ef5 Merge branch 'issue258-adjustment' into 'merge-foundation'
STYLE: reinstate targetType when building paraview modules (related to #258)

- potentially useful for static builds

See merge request !68
2016-10-07 11:02:41 +01:00
831cd15f03 Merge branch 'merge-preconvert' into 'merge-foundation'
Merge preconvert

Very basic cleanup of some of the mesh conversion infrastructure prior to binging in large pieces of code.

- Remove ancient samm, pro-am, prostar3 routines as being unused and unsupportable (since the original products ceased existence over 10 years ago).
- Open protected access to some meshReader bits, to help when implementing polyhedral readers.
- Drop meshReaders/meshWriters namespace, use fileFormats instead.
- Reorganize file-structure within src/conversion.

See merge request !69
2016-10-07 11:02:07 +01:00
3915942195 ENH: cleanup ensightParts to use updated infrastructure (issue #241).
- Use ensightCase for case writing.
  Rebase ensightPartCells/ensightPartFaces on
  ensightCells/ensightFaces routines.

- Greatly reduces code duplication potential source of errors.
2016-10-07 11:24:47 +02:00
9b3f36d593 STYLE: reinstate targetType when building paraview modules (related to #258)
- potentially useful for static builds
2016-10-07 10:51:32 +02:00
b92754311a reactingTwoPhaseEulerFoam::IATE: Added phaseChange source
to handle the effect of condensation and evaporation on bubble size
2016-10-07 09:34:35 +01:00
803f4e66c2 plane: Make constructors explicit
Resolves bug-report http://bugs.openfoam.org/view.php?id=2284
2016-10-06 14:20:59 +01:00
d6b404dba2 reactingTwoPhaseEulerFoam::IATE: Added wallBoiling sub-model
to handle the size of bubbles created by boiling.  To be used in
conjunction with the alphatWallBoilingWallFunction boundary condition.

The IATE variant of the wallBoiling tutorial case is provided to
demonstrate the functionality:

tutorials/multiphase/reactingTwoPhaseEulerFoam/RAS/wallBoilingIATE
2016-10-06 12:40:58 +01:00
749d68f888 Merge branch 'merge-foundation' of develop.openfoam.com:Development/OpenFOAM-plus into merge-foundation
Conflicts:
	src/mesh/snappyHexMesh/snappyHexMeshDriver/snappyLayerDriver.C
2016-10-05 17:58:13 +01:00
762a202810 BUG: snappyHexMesh: assing to boundaryField. Fixes #260. 2016-10-05 17:52:54 +01:00
07bbb1852e STYLE: Updated Doxygen comment markers 2016-10-05 15:16:12 +01:00
9ae7fd8725 BUG: corrected constructor 2016-10-05 15:15:55 +01:00
54da8848ba ENH: add in ensightWrite function object (issue # 241)
- Currently no writing of clouds.
  Managing restarts needs more thought.
2016-10-05 13:13:23 +02:00
b04a6a05e5 GIT: relocate ensight components to library locations 2016-10-05 13:13:12 +02:00
e57ca15bda ENH: complete reworking of foamToEnsight to make into a library (issue #241)
- eliminate ensightAsciiStream, ensightBinaryStream, ensightStream in
  favour of using ensightFile and ensightGeoFile classes throughout.

- encapsulate mesh-parts sorting with the ensightCells, ensightFaces
  class.

- handle of patches/faceZones entirely within ensightMesh for a lighter
  interaction with field output. Both faceZones and point fields need
  more testing to see if they behave properly for all cases.

- move some output functionality into its own namespace
  'ensightOutput', move into a library.

- use the ensightCase class to open new ensight output streams
  in the proper sub-directory locations.
2016-10-06 10:43:22 +02:00
e1240ece7b ENH: add ensightCase management to fileFormats
- part of generalizing the ensight infrastructure (issue #241)

- General bookkeeping when creating ensight files.
2016-10-05 12:59:24 +02:00
0d66ffcce8 twoPhaseEulerFoam: Corrected kineticTheory frictional stress at walls
Patch contributed by Juho Peltola, VTT

The new JohnsonJacksonSchaefferFrictionalStress model is included.

Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2058
2016-10-05 09:27:28 +01:00
96d86ec6f1 tutorials/multiphase/reactingTwoPhaseEulerFoam: Initialize by first running without boiling
then restart with boiling.

Contributed by Juho Peltola, VTT
2016-10-04 16:39:49 +01:00
daf57eddf6 alphatWallBoilingWallFunctionFvPatchScalarField: Evaluate alphatConv_ outside loop to improve speed
Patch contributed by Juho Peltola
2016-10-04 16:37:32 +01:00
f8d8b3ad5e Merge branch 'issue258-merge-foundation' into 'merge-foundation'
BUG: paraview plugin not being built in merged version (closes #258)

change in configuration got missed

See merge request !66
2016-10-04 15:28:17 +01:00
68ad4c50b2 BUG: paraview plugin not being built in merged version (closes #258) 2016-10-04 15:58:24 +02:00
6823cb02ab Merge branch 'merge-foundation' of develop.openfoam.com:Development/OpenFOAM-plus into merge-foundation 2016-10-04 14:49:34 +01:00
58d16674a0 COMP: Corrected Clang-reported errors 2016-10-04 14:49:26 +01:00
a5fb96f124 Merge branch 'output-format' into 'merge-foundation'
Output format

Output changes (issues #253 , #254 , #255 , #256) as well as minor change (issue #257).
Usage of the new methods to be applied as a later patch.

See merge request !65
2016-10-04 10:28:29 +01:00
8016af3704 reactingTwoPhaseEulerFoam: Enhanced support for wall boiling
Contributed by Juho Peltola, VTT

Notable changes:

    1. The same wall function is now used for both phases, but user must
       specify phaseType ‘liquid’ or ‘vapor’

    2. Runtime selectable submodels for:
       - wall heat flux partitioning between the phases
       - nucleation site density
       - bubble departure frequency
       - bubble departure diameter

    3. An additional iteration loop for the wall boiling model in case
       the initial guess for the wall temperature proves to be poor.

The wallBoiling tutorial has been updated to demonstrate this new functionality.
2016-10-04 09:53:09 +01:00
7c106cd43e GIT: Resolved conflict 2016-10-04 09:45:46 +01:00
55c9238259 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-10-04 09:35:11 +01:00
35fc264a2e Merge branch 'feature-wallDistanceCalcInterval' into 'develop'
ENH: wallDist - added option to evaluate every XXX steps

Added functionality to update the wall distance every XXX steps

Note: only applies to movePoints() - topology change bypasses the update interval and triggers a re-calculation
Syntax:
```
wallDist
{
    method          ...
    updateInterval 5; // optional - default is 1
}
```

Test case: [mixerVesselAMI2D.tgz](/uploads/c0bee1decc0337018272f3566b6a4416/mixerVesselAMI2D.tgz)

See merge request !62
2016-10-04 08:58:05 +01:00
6c9622b356 Merge branch 'doxygen-style' into 'merge-foundation'
STYLE: minor adjustments to doxygen comments



See merge request !64
2016-10-04 08:45:37 +01:00
3e0e4532fd STYLE: minor adjustments to doxygen comments 2016-10-04 09:16:08 +02:00
6c3c2f1399 icpc rules: removed another unimportant warning 2016-10-04 08:10:28 +01:00
9c2892cd82 Removed #define __STDC_LIMIT_MACROS needed for C++ < 11
See http://bugs.openfoam.org/view.php?id=1474
2016-10-04 08:08:42 +01:00
8dc3bbe6fd ENH: remove unneeded lines in List binary output (issue #256)
Writing an empty list in binary results in unnecessary newlines that
make the output 'noisier'.

Old output
~~~~~~~~~~
ASCII
    someEmptyList___0();

Binary
    someEmptyList___
    0
    ;

Updated
~~~~~~~
ASCII
    someEmptyList___0();

Binary
    someEmptyList___0;
2016-10-04 08:40:55 +02:00
56787c8074 STYLE: extraneous UINT64_MIN macros (issue #257) 2016-10-03 17:20:14 +02:00
96c3a09024 ENH: provide direct access to raw pointer/reference from autoPtr (issue #252)
All of the access methods for autoPtr include validity checks and will
fail if the underlying point is NULL. In some cases, however, we'd
like to retain the automatic deletion mechanism, but still address a
nullptr. This is mostly for cases in which a file-stream should be
allocated, but only on the master process. For these cases we'd still
like to pass through and reference the underlying pointer (eg, to
obtain the correct method call) without tripping the pointer check
mechanism. If we attempt to use the ptr() method, the autoPtr memory
management is bypassed and we risk memory leaks.

Instead provide an alternative mechanism to obtain the raw underlying
pointers/references. Use rawPtr() and rawRef() for these potentially
useful, but also potentially dangerous, operations.
2016-10-03 16:38:19 +02:00
598da1ac25 ENH: surfaceCheck: added -outputThreshold option to manage file writing 2016-10-03 13:55:30 +01:00
6a489bd8a6 Updated header 2016-10-03 09:12:55 +01:00
48a2356953 fieldTypes: Using C++11 __VA_ARGS__ functionality created the FOR_ALL_FIELD_TYPES macro
This supports the abstraction of the set of fields from the field code
generation macros making it easier to change the set of fields supported
by OpenFOAM.  This functionality is demonstrated in the updated
fvPatchFields macros and will be applied to the rest of the field code
generation macros in the future.
2016-10-03 09:08:01 +01:00
182f0a72ae MRG: Incremental foundation merge 2016-10-03 08:27:06 +01:00
3df66b25ec STYLE: minor updates 2016-10-03 08:24:22 +01:00
dd31eb9e6e ENH: Adding autoMap and rMap tp greyDiffusiveViewFactorFixedValueFvPatchScalarField 2016-09-30 11:03:10 -07:00
3f4f05b6e0 Map, SortableList: Added constructors from and assignment to initializer list
Patch based on contribution from Mattijs Janssens
Resolves http://bugs.openfoam.org/view.php?id=2276
2016-09-30 18:49:38 +01:00
ec9883f389 Field: Added constructor from UIndirectList
Patch contributed by Mattijs Janssens
2016-09-30 18:48:26 +01:00
6a3d6e52ea Merge branch 'adjust-config-foundation-merge' into 'merge-foundation'
Adjust config foundation merge

Rationalize config files, foamy build, tutorials.

See merge request !63
2016-09-30 17:06:34 +01:00
22a7a70256 Merge remote-tracking branch 'origin/merge-foundation' into adjust-config-foundation-merge 2016-09-30 17:50:20 +02:00
4bdf712b35 triangle storage: Return barycentric coordinates as FixedList instead of List
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2278
2016-09-30 16:22:55 +01:00
e98e372f8e ENH: Tutorial updates 2016-09-30 15:31:35 +01:00
54042b08df ENH: Function objects - first pass at updating read functionality
Note: should be using the result of the parent::read(dict) when
deciding whether to read local entries...
2016-09-30 13:24:58 +01:00
839f14afcd ENH: Code clean-up 2016-09-30 12:30:02 +01:00
64560defc5 ENH: wallDist - suppress calc if updateInterval is zero 2016-09-30 11:47:38 +01:00
e072a2be33 ENH: add -noZero option for foamToEnsight* conversion
- The zero directory is incomplete, skip these entries.
2016-09-30 12:44:00 +02:00
bd0e982d99 MRG: Initial commit after latest Foundation merge 2016-09-30 11:16:28 +01:00
1e00bd7f45 GIT: resolve merge errors to ddt2, zeroGradient functionObjects
- the function objects are from issue #224 and issue #235
2016-09-30 11:26:58 +02:00
3c86995198 COMP: remove boost/mpfr/gmp linkage for foamyMesh components.
- CGAL itself includes its library dependencies, we only need to
  provide the -L... option to the proper ThirdParty locations.

  Should help improve general build robustness.
2016-09-30 17:00:05 +02:00
f3888f0a2a Merge branch 'merge-foundation' of develop.openfoam.com:Development/OpenFOAM-plus into merge-foundation 2016-09-29 16:24:12 +01:00
60d7a71eaf STYLE: forceCoeffs - minor code updates 2016-09-29 16:24:08 +01:00
aa78b03011 ENH: functionObjects - do not add to list if error on read 2016-09-29 16:19:15 +01:00
6d380dddf6 ENH: Updated kOmegaSST family of models 2016-09-29 11:40:30 +01:00
84683b5f90 CONFIG: remove foundation use of FOAMY_HEX_MESH control.
- instead we use the CGAL settings directly since they have the
  same option of (version | system | none)

- may wish to review this again in the future.
2016-09-29 12:36:27 +02:00
6645d6d1cd STYLE: Added header documentation to function 2016-09-29 10:30:30 +01:00
5c921caa55 fvOptions: Corrected docs: 'fieldName' -> 'fields'
Resolves bug-report http://bugs.openfoam.org/view.php?id=2273
2016-09-28 19:42:07 +01:00
3c790e2316 Correcting Typo in SolarLoad radiation model 2016-09-28 10:42:21 -07:00
361ed6420d Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-09-28 09:06:35 -07:00
5c4bd557cb ENH: wallDist - added option to evaluate every XXX steps 2016-09-28 16:59:57 +01:00
ee5251a7bb keep bas 2016-09-28 08:54:41 -07:00
95c74f9b93 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-09-28 12:26:58 +01:00
1c2aadb8d8 ENH: distributedTriSurfaceMesh: bail out if getting stuck due to precision errors 2016-09-28 12:26:23 +01:00
6d7ff59fc8 ENH: provide refOrNull method for autoPtr.
- Normally use '()' to deference. This has extra safety and issues a
  fatal error if the underlying pointer is not valid.

  However, in some cases we are happy with getting a null reference.
  The refOrNull() method returns the reference without any checking.

  Usage example:

      autoPtr<OFstream> osPtr;
      if (Pstream::master())
      {
          osPtr.reset(new OFstream(...));
      }
      writeViaMaster(osPtr.refOrNull());

      - The writeViaMaster() call takes an OFstream reference,
        but this is only used directly on the master.
        The slaves will pass things through to the master.
2016-09-28 11:26:42 +02:00
3dbd39146c STYLE: consistency updates 2016-09-27 15:17:55 +01:00
df9d406816 ENH: add in code for ensightCells, ensightFaces
- intended as a base for various ensight-related handling
2016-09-27 13:38:43 +02:00
bbec683e42 ENH: provide list of enums for NamedEnum
- can be used to loop over all enumerations in the order of definition.
2016-09-27 12:40:17 +02:00
c9cf232a02 ENH: add some convenience methods in ensightFile, ensightGeoFile
- Some commonly used write methods that are independent of
  the calling context (ie, 2D/3D data, geometry, fields)

- Provide singleton null() for ensightFile, ensightGeoFile.
  Can be used for MPI slaves that need a file reference for their
  methods, but will never write to it, but it is also reasonable
  to use an autoPtr with rawRef() for that as well.
2016-09-27 10:08:07 +02:00
405210a4f2 STYLE: relocate commonly used ensight components to fileFormats
- use explicit names within ensightPTraits
2016-09-27 09:02:35 +02:00
89d9fd1550 ENH: Tutorial updates 2016-09-26 13:00:49 +01:00
47eb24bed5 GIT: Resolved conflicts arising from merge with develop branch 2016-09-26 10:57:34 +01:00
ad1e798293 ENH: Initial testing updates 2016-09-26 09:28:31 +01:00
ba249f8e76 STYLE: minor adjustment to echoed information 2016-09-26 08:02:03 +02:00
3c935ca89e Fix tensor names in foamToEnsightParts case file (fixes #243) 2016-09-26 07:41:02 +02:00
025791559d blockMesh: Added printing of the block description to the '-help' output
blockMesh -help

Usage: blockMesh [OPTIONS]
options:
  -blockTopology    write block edges and centres as .obj files
  -case <dir>       specify alternate case directory, default is the cwd
  -dict <file>      specify alternative dictionary for the blockMesh description
  -noFunctionObjects
                    do not execute functionObjects
  -region <name>    specify alternative mesh region
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

Block description

  For a given block, the correspondence between the ordering of
  vertex labels and face labels is shown below.
  For vertex numbering in the sequence 0 to 7 (block, centre):
    faces 0 (f0) and 1 are left and right, respectively;
    faces 2 and 3 are bottom and top;
    and faces 4 and 5 are front the back:

           4 ---- 5
      f3   |\     |\   f5
      |    | 7 ---- 6   \
      |    0 |--- 1 |    \
      |     \|     \|    f4
      f2     3 ---- 2

            f0 ----- f1

Using: OpenFOAM-dev (see www.OpenFOAM.org)
Build: dev-dc59c63351e7
2016-09-25 20:05:12 +01:00
abb4d67134 pre-commit-hook: Added checks for multi-level template parameters and 'NULL'
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2267

   1. Spaced ending of multi-level template parameters are not allowed, such as:

       List<List<scalar> >

     which instead should be:

       List<List<scalar>>

   2. The use of the 'NULL' macro should be replaced by 'nullptr'
2016-09-25 18:43:50 +01:00
a2a6fedf9f blockMesh::blockDescriptor: Added block indexing description 2016-09-25 18:38:31 +01:00
1649b57a40 processorFvPatchField: If the value is not supplied set to the internal field 2016-09-25 18:38:06 +01:00
dc59c63351 processorFvPatchField: Reinstate 'value' as an optional entry 2016-09-25 16:54:20 +01:00
fdece9b2ce tutorials/incompressible/shallowWaterFoam/squareBump/.gmtcommands4: deleted
Resolves bug-report http://bugs.openfoam.org/view.php?id=2268
2016-09-25 16:53:37 +01:00
b6feaea53b fvPatchFields: Constructors from dictionary now call the corresponding constructor of the fvPatchField base-class
to ensure 'patchType' is set as specified.

Required substantial change to the organization of the reading of the
'value' entry requiring careful testing and there may be some residual
issues remaining.  Please report any problems with the reading and
initialization of patch fields.

Resolves bug-report http://bugs.openfoam.org/view.php?id=2266
2016-09-25 09:11:53 +01:00
93530f1747 blockMesh: Added support for (<block> <face>) specification of patch faces
e.g. for the cavity tutorial the moving wall patch can be specified in
terms of the block vertices as before:

boundary
(
    movingWall
    {
        type wall;
        faces
        (
            (3 7 6 2)
        );
    }
    .
    .
    .

or the new specification of the face as block 0, block face 3:

boundary
(
    movingWall
    {
        type wall;
        faces
        (
            (0 3)
        );
    }
2016-09-24 08:40:13 +01:00
cff8efb98b ENH: reduce startup time for foamToVTK conversion
- Similar to ensight converters (issue #240),
  improve speed for detection of lagrangian clouds.

- provide a -noLagrangian option for symmetry
2016-09-23 18:45:06 +02:00
1fbcb686ff STYLE: Consistency updates 2016-09-23 16:52:46 +01:00
88ca081c8c ENH: reduce startup time for ensight conversion (issue #240).
- Less looping when detecting lagrangian clouds and their fields.

- Avoid using Time::setTime() and IOobjectList in tight loops.
  They both kill performance immensely.

ENH: provide a -noLagrangian option to foamToEnsight and foamToEnsightParts
for even more control.
2016-09-23 17:45:47 +02:00
b9940cbbb1 COMP: Multiple changes - first clean build after latest merge - UNTESTED 2016-09-23 15:36:53 +01:00
3503c872a5 STYLE: add OpenFOAM version to ensight geom file description.
- More informative than a horizonal line, can help when debugging.

STYLE: remove unused write field methods from ensightParts
2016-09-23 14:53:01 +02:00
06699f17f5 BUG: ensight output failing with dimensioned field (fixes #244)
- The new field needs initialization with a dimensioned<Type> not just
  the dimensionSet.

- The new field was also incorrectly being registered, which could
  cause issues later.
2016-09-23 13:13:12 +02:00
3c25f26aab BUG: incorrect symmTensor order for some ensight output (fixes #243)
- affects foamToEnsightParts, sampled surfaces

- Use ensightPTraits mechanism throughout to avoid this issue
2016-09-23 09:10:57 +02:00
f066a9b54e Updated template formatting
Resolves bug-report http://bugs.openfoam.org/view.php?id=2264
2016-09-22 21:03:30 +01:00
447cdc2098 globalMeshData: Revert NULL -> nullptr 2016-09-22 14:22:26 +01:00
c0f841e4f7 globalIndexAndTransform: Support any number of transforms but no more than 3 per point
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=1815
2016-09-22 14:10:45 +01:00
40f8709488 wmake: export WM_SCHEDULER from sub-shell for non-POSIX bash compliance 2016-09-22 08:34:15 +01:00
9e1e9011a5 decomposePar: Corrected construction of cloud for processors
Resolves bug-report http://bugs.openfoam.org/view.php?id=2239
2016-09-21 17:19:58 +01:00
0c168c43fa ENH: improve startup time for foamToEnsight conversion (issue #240).
Old code:
    Found 10990 time steps
    Search for moving mesh ... no moving mesh detected.
    Startup in 329.09 s

Updated:
    Found 10990 time steps
    Search for moving mesh ... no moving mesh detected.
    Startup in 1.6 s

- Cause was checking "polyMesh/points" via an IOobject.
  Short-circuit with a check for a polyMesh/ directory first.

  Limit the check to the master-node as well to further reduce
  load on the file-system.

------------------------------

ENH: improve per-step conversion times for foamToEnsight.

Old code:
    Converting 11001 time steps
    Time [0] = 0       Wrote in 1.53 s
    Time [1] = 1       Wrote in 1.52 s
    ...
    Time [100] = 100   Elapsed time 205.35 s

Updated:
    Converting 11001 time steps
    Time [0] = 0       Wrote in 1.4 s
    Time [1] = 1       Wrote in 0.07 s
    ...
    Time [100] = 100   Elapsed time 42.4 s

- Speedup by hashing test results from the first conversion step
  instead of checking each time.

  Check data on all nodes to avoid problems with incomplete writes.

------------------------------

BUG: moving mesh detection failed for foamToEnsightParts

- adjusted to agree with updated foamToEnsight

------------------------------

Note:

- foamToEnsightParts (serial) still has about twice the throughput of
  foamToEnsight.
2016-09-21 18:15:19 +02:00
481f8e5b97 linearUpwind: Simplified the vector specialization 2016-09-21 11:09:59 +01:00
bd0b363292 linearUpwind: Specialize for volVectorField to support cached gradients 2016-09-21 09:50:49 +01:00
1d08519d6e linearUpwind: Evaluate the gradient of each component of the field to provide support all field types
Also reduces peak-storage as it now generates a volVectorField for each component
rather than the gradient of the field type.
2016-09-20 21:34:47 +01:00
9da9a78cee turbulentTransportModels: Add new Maxwell model 2016-09-20 21:11:41 +01:00
1e94682f24 tutorials: Renamed sub-directories ras -> RAS and les -> LES 2016-09-20 19:03:40 +01:00
bb3c0c3593 Maxwell model for viscoelasticity using the upper-convected time
derivative of the stress tensor.  See
http://en.wikipedia.org/wiki/Upper-convected_Maxwell_model

The model includes an additional viscosity (nu) from the transport
model from which it is instantiated, which makes it equivalent to the
Oldroyd-B model for the case of an incompressible transport model.
See https://en.wikipedia.org/wiki/Oldroyd-B_model
2016-09-20 18:38:15 +01:00
6baa2aaf58 Organisation of pimpleFoam tutorials into categories of turbulence modelling 2016-09-20 18:24:09 +01:00
6c56d61846 ENH: fvc: instantiating 2D volVectorField 2016-09-20 17:07:30 +01:00
6b42dbae41 TurbulenceModels: Created a general base-class and selection mechanism for laminar stress models
Renamed the original 'laminar' model to 'Stokes' to indicate it is a
linear stress model supporting both Newtonian and non-Newtonian
viscosity.

This general framework will support linear, non-linear, visco-elastic
etc. laminar transport models.

For backward compatibility the 'Stokes' laminar stress model can be
selected either the original 'laminar' 'simulationType'
specification in turbulenceProperties:

    simulationType laminar;

or using the new more general 'laminarModel' specification:

    simulationType laminar;

    laminar
    {
        laminarModel        Stokes;
    }

which allows other laminar stress models to be selected.
2016-09-20 15:05:43 +01:00
49d3b6eae9 foamList: Added missing -I$(LIB_SRC)/meshTools/lnInclude needed for recent changes to AMI 2016-09-20 14:51:13 +01:00
e468d1ecc9 reactingParcelFilmFoam: Corrected support for -postProcess option 2016-09-20 14:50:41 +01:00
9fbd612672 GIT: Initial state after latest Foundation merge 2016-09-20 14:49:08 +01:00
19d4355387 Merge branch 'Fix_GL_224' into 'develop'
BUG: output field name instead of field (fixes #224)



See merge request !59
2016-09-20 10:53:54 +01:00
4dc06c656d BUG: output field name instead of field (fixes #224) 2016-09-20 15:15:19 +05:30
b32bd3f295 solvers: Moved createRDeltaT.H into createFields.H so that it is available with the -postProcess option
Required to support LTS with the -postProcess option with sub-models dependent on ddt
terms during construction, in particular reactingTwoPhaseEulerFoam.
2016-09-19 22:08:39 +01:00
3aa78f2bf3 blockMesh: Added block face orientation checks to aid debugging
Individual inward-pointing faces are checked and if all faces are
inward-pointing the block is inside-out.  These errors are fatal and the
message indicates which block the error occurs in and where in the
blockMeshDict the block is defined.
2016-09-19 07:52:42 +01:00
fd2ac09c4e mapFields: reset the FOAM_CASE environment variable
Patch proveded by Alexey Matveichev
Resolves bug-report http://bugs.openfoam.org/view.php?id=2229
2016-09-17 14:53:15 +01:00
91c8c053a9 setInitialMultiRegionDeltaT: update to be consistent with the standard setInitialDeltaT
Resolves bug-report http://bugs.openfoam.org/bug_change_status_page.php
2016-09-16 17:39:50 +01:00
899fe81eba PatchToPatchInterpolate: Update to use the tmp ref() non-const access function
Resolves bug-report http://bugs.openfoam.org/view.php?id=2248
2016-09-16 14:49:50 +01:00
b4d83b8f83 ENH: more flexible selection/naming for ddt2 FO (issue #224)
- bugfix (empty patches), and added detection of steady-state
  scheme.

Caveat: when called via execFlowFunctionObjects will always produce a
  zero field, since the oldTime field is not available for this mode.
2016-09-16 14:49:47 +02:00
3008d80bc7 ENH: runTime calculation of zeroGradient volume fields (issue #235)
Extrapolate internal field to walls for post-processing.
Uses as new syntax for handling the naming of multiple fields.

The input fields are selected via a wordReList.
For example,

    fields      (U "(T|k|epsilon|omega)");

The names of the resulting output fields use placeholder tokens for
flexibility. For example,

    result      zeroGradient(@@);

The '@@' placeholder is replaced by the name of the input field.
Eg,
    fields      (U T);
    result      zeroGradient(@@);
->  zeroGradient(U), zeroGradient(T)

Or,
    fields      (U T);
    result      @@nearWall;
->  UnearWall, TnearWall

NOTE:
    The function object will skip over fields that only have
    processor, empty, zeroGradient patches. The operation does not
    make much sense for these, and it avoids inadvertently
    re-processing fields twice.
2016-09-16 21:33:40 +02:00
7cc35abc3a GAMGAgglomeration: corrected continueAgglomerating
Patch provided by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2226
2016-09-16 11:10:03 +01:00
f281477d85 rigidBodyMotion: Change the transform averaging to use approximate inverse-distance weighting
Now works correctly for an arbitrary number of bodies
Resolves bug-report http://bugs.openfoam.org/view.php?id=2211
2016-09-14 14:14:14 +01:00
d3d693e17c ENH: runTime calculation of (dp/dt)^2 - issue #224
- implemented using magSqr() instead of sqr().
  For scalar fields they are the same, but can be useful
  if this function object is extended for more field types.
2016-09-14 14:02:40 +02:00
8dc78d188a rigidBodyMeshMotionSolver: experimental nDoF mesh-motion solver supporting the displacement-based elliptic solvers
Specification for the tutorials/multiphase/interDyMFoam/ras/floatingObject case:

dynamicFvMesh       dynamicMotionSolverFvMesh;

motionSolverLibs   ("librigidBodyMeshMotion.so" "libfvMotionSolvers.so");

solver             rigidBodyMotionSolver;

rigidBodyMotionSolverCoeffs
{
    report          on;

    meshSolver
    {
        solver displacementLaplacian;

        displacementLaplacianCoeffs
        {
            diffusivity inverseDistance (floatingObject);
        }
    }
.
.
.
2016-09-14 09:59:02 +01:00
e75d811b7d MGridGenGAMGAgglomeration: Update call to continueAgglomerating
Resolves bug-report http://bugs.openfoam.org/view.php?id=2244
2016-09-14 09:41:03 +01:00
9de4a75813 ENH: expand data mask for foamToEnsight (issue #231)
- Default is a width of 8 characters, but this can be extended up to 31
  characters via the '-width' command-line option.

- Now use a similar structure as foamToEnsightParts for the masking.
  This reduces the clutter within the directory, makes it easier to
  selectively delete some time steps (using shell commands).

- Added in a "time" information data in each sub-directory to
  make it possible to reconstruct the case file with an external
  script.

- Conversion of cloud data should now also work in parallel
  (may need more testing).

- Support binary output for cloud data.

- Better avoidance of illegal ensight variable names.
  But still partially incomplete (due to patch fields).

==================================================
Example of NEW file structure:

    EnSight/verticalChannel.case        # case name
    EnSight/geometry                    # for non-moving geometry

    EnSight/data/                       # time-varying data
    EnSight/data/00000000/
    EnSight/data/00000001/
    ...

  Fields are stored by name within the data/********/ directories:

    EnSight/data/00000001/time          # human-readable time info
    EnSight/data/00000001/U
    EnSight/data/00000001/p
    ...
    EnSight/data/00000001/geometry      # for moving geometry

  Clouds are stored at the next sub-directory level:

    EnSight/data/00000001/lagrangian/<cloudName>/positions
    EnSight/data/00000001/lagrangian/<cloudName>/U
    ...

==================================================
The old structure was significantly more cluttered:

    EnSight/verticalChannel.case
    EnSight/verticalChannel.0000.mesh
    EnSight/verticalChannel.0001.p
    EnSight/verticalChannel.0001.<cloudName>
    EnSight/verticalChannel.0001.<cloudName>.U

==================================================
2016-09-13 18:26:00 +02:00
d56924624b COMP: CGAL rules should use lib64/ (fixes #234)
- 64-bit builds of gcc/mpfr/gmp use lib64/ for their installation path.
  Use this for the wmake rules as well.
2016-09-13 08:58:00 +02:00
04300070cf BUG: metisDecomp compile failure for WM_DP (closes #232)
- spurious use of floatScalar instead of scalar for processor weights.

STYLE: partially updated dummy metis.h to reflect metis-5.1.0 API
2016-09-13 08:51:03 +02:00
b3e5224753 GAMGSolverSolve: Replace PBiCG with PBiCGStab to solve the coarsest-level of asymmetric matrices 2016-09-10 16:44:01 +01:00
5c1a647092 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-09-09 21:49:06 +01:00
34928b7c82 reactingEulerFoam/interfacialModels/dragModels: Corrected file permissions 2016-09-09 21:48:29 +01:00
b5e263be0d foamEtcFile: replaced redundant package directory name 2016-09-09 20:00:26 +01:00
86ccbca390 combustionModels/FSD: Corrected
Renamed 'omega' to 'FSDomega' to avoid a clash with the k-omega
turbulence models.

Resolves bug-report http://bugs.openfoam.org/view.php?id=2237
2016-09-09 16:23:28 +01:00
8e37aa0a37 renumberMethods: Added missing .C file for structuredRenumber 2016-09-09 14:54:12 +01:00
0a1300d882 wmake: Updated '-q' option to work on Ubuntu and other 'dash'-based GNU/Linux distributions 2016-09-09 14:53:10 +01:00
4fcdb0b4e4 codedFvOption: Added cellSet support
Patch provided by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2240
2016-09-09 12:29:06 +01:00
cb1a012b66 structuredRenumber: Corrected to run in parallel
Patch contributed by Mattijs Janssens
2016-09-09 12:20:25 +01:00
8e0981d9ed functionObjectList::readFunctionObject: Added support for region specification
Now the postProcess utility '-region' option works correctly, e.g. for
the chtMultiRegionSimpleFoam/heatExchanger case

postProcess -region air -func "mag(U)"

calculates 'mag(U)' for all the time steps in region 'air'.
2016-09-09 11:01:37 +01:00
4ea1613653 Merge branch 'master' into develop 2016-09-08 12:00:46 +01:00
360ab50ed6 tutorials/multiphase/interFoam/ras/weirOverflow: Updated to improve robustness
Resolves bug-report http://bugs.openfoam.org/view.php?id=2236
2016-09-07 14:05:37 +01:00
b2694847d6 STYLE: PrimitivePatch: undefined function 2016-09-07 12:40:35 +01:00
ae9643e181 ENH: snappyHexMesh: combine previous zone based algorithm with v3+ one.
Fixes #66.
2016-09-07 12:38:59 +01:00
4dcbb32d24 BUG: runTimePostProcessing - corrected surface visualisation caused by regression update/bug 2016-09-07 10:02:02 +01:00
03cb76a213 BUG: Non-const dereferencing of tmp in fvc:dt2dt2 (closes #227) 2016-09-07 09:33:26 +02:00
17f0aa1db8 STYLE: propogate WM_CC for CMake (fixes #226)
- reported by Bruno
2016-09-06 16:17:20 +02:00
99efe5f8d8 BUG: triSurface IO operators are asymmetrical (fixed #225)
- Also reported as http://bugs.openfoam.org/view.php?id=2188
2016-09-06 14:57:40 +02:00
29d5a10f97 ENH: add stream operators for MeshedSurface, UnsortedMeshedSurface
- add corrsponding testing into surfaceMeshConvertTesting too
2016-09-06 14:45:44 +02:00
427f2c65b9 GAMGAgglomeration: Add support for nCellsInCoarsestLevel = 1 and better agglomeration termination
Patch provided by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2226
2016-09-06 13:29:05 +01:00
41eeaaede4 algebraicPairGAMGAgglomeration: agglomerate based on the maximum of the upper and lower coefficients
Patch provided by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2234
2016-09-06 12:56:54 +01:00
31f70137af etc/config.sh/settings: Updated set of WM_CC, WM_CXX etc. variables to compile ThirdParty software
Patch provided by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2051
2016-09-05 20:48:50 +01:00
e86688a53c Solvers: Corrected typo 2016-09-05 11:58:41 +01:00
4502b7a557 Updated header 2016-09-05 11:57:41 +01:00
0857f479a8 PBiCGStab: New preconditioned bi-conjugate gradient stabilized solver for asymmetric lduMatrices
using a run-time selectable preconditioner

References:
    Van der Vorst, H. A. (1992).
    Bi-CGSTAB: A fast and smoothly converging variant of Bi-CG
    for the solution of nonsymmetric linear systems.
    SIAM Journal on scientific and Statistical Computing, 13(2), 631-644.

    Barrett, R., Berry, M. W., Chan, T. F., Demmel, J., Donato, J.,
    Dongarra, J., Eijkhout, V., Pozo, R., Romine, C. & Van der Vorst, H.
    (1994).
    Templates for the solution of linear systems:
    building blocks for iterative methods
    (Vol. 43). Siam.

See also: https://en.wikipedia.org/wiki/Biconjugate_gradient_stabilized_method

Tests have shown that PBiCGStab with the DILU preconditioner is more
robust, reliable and shows faster convergence (~2x) than PBiCG with
DILU, in particular in parallel where PBiCG occasionally diverges.

This remarkable improvement over PBiCG prompted the update of all
tutorial cases currently using PBiCG to use PBiCGStab instead.  If any
issues arise with this update please report on Mantis: http://bugs.openfoam.org
2016-09-05 11:46:42 +01:00
b19fa43100 polyMesh: clear cellTree if mesh moves
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2235
2016-09-04 21:16:55 +01:00
49bce39429 PV*Readers/Allwmake: set CXX and CC if required
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2233
2016-09-04 21:05:20 +01:00
8f2b34dc06 polyBoundaryMesh: Remove patchGroups which clash with patch names
This allows freedom in the naming of patches when patchGroup-based
boundary specification is not used.

Patch contributed by Mattijs Janssens
2016-09-04 10:35:19 +01:00
9c7101739b tutorials/multiphase/interDyMFoam/ras/DTCHull: Corrected specification of restraints
Resolves bug-report http://bugs.openfoam.org/view.php?id=2224
2016-09-03 21:14:17 +01:00
15fda67bbc decomposePar: corrected decomposeParDict read using -region option
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2227
2016-09-03 20:54:16 +01:00
c193493822 EulerCoordinateRotation,STARCDCoordinateRotation: Corrected typo
Resolves bug-report http://bugs.openfoam.org/view.php?id=2225
2016-09-03 16:46:01 +01:00
96f2562e93 OpenFOAM-dev/etc/bashrc: Use 'pwd -P' to handle relative paths and links
Resolves bug-report http://bugs.openfoam.org/view.php?id=2223
2016-09-03 15:57:52 +01:00
292c522c71 ENH: Adding iso-plane histogram to regionSizeDistribution 2016-09-02 12:28:20 -07:00
ddda616919 Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus 2016-09-02 11:52:59 -07:00
a4b62e6549 Adding area weighted average to U mean calculation for uniformJump option in fan BC 2016-09-02 11:51:59 -07:00
1589e8d431 BUG: buoyantPimpleFoam - div term should be present for both compressible and incompressible 2016-09-02 08:14:10 +01:00
8185f1d62e Revert "polyBoundaryMesh::groupPatchIDs(): Make name clash between patch and group name fatal"
This reverts commit f38f0d3e86.
2016-08-26 11:44:56 +01:00
6ffdce83aa STYLE: Corrected spelling error 2016-08-25 17:28:50 +01:00
f38f0d3e86 polyBoundaryMesh::groupPatchIDs(): Make name clash between patch and group name fatal
If this clash is allowed boundary conditions set by wildcards are
processed incorrectly.
2016-08-25 16:42:08 +01:00
16e4b25ac0 BUG: Corrected Doxygen style sheet - patch contributed by Bruno Santos. Fixes #217 2016-08-25 13:36:43 +01:00
bc5c6d83df BUG: incompressible/icoFoam/cavityMappingTest - renamed Allrun-serial->Allrun. Fixes #220 2016-08-25 13:34:17 +01:00
ac42dd2494 BUG: mesh/filter case - corrected Allrun script. Fixes #219 2016-08-25 13:32:45 +01:00
74e1352cc2 src/Pstream: Added Allwclean consistent with the Allwmake
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2218
2016-08-25 08:25:12 +01:00
bf9c6b6d17 foamToVTK, PVFoamReader: Resolve problems converting VTK_WEDGE
- There will be triangles rendered inside the mesh (when
    surface-rendering), because one of the cell's triangles is defined
    as a quadrangle in VTK_WEDGE.

  - Therefore, this VTK_WEDGE representation is only used when
    decomposing the mesh, otherwise the correct representation is done
    by VTK_POLYHEDRON.

  - Furthermore, using VTK_PYRAMID gave worse result, because it renders
    2 triangles inside the mesh for the collapsed quadrangle, likely due
    to mismatch with the adjacent cell's face.

  - Using VTK_HEXAHEDRON was not tested in this iteration, given that it
    should give even worse results, when compared to using VTK_PYRAMID.

Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2099
2016-08-24 22:08:10 +01:00
e476f80e7a functionObjects: Improved handling of multi-file indexing and code style
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2216
2016-08-24 19:34:00 +01:00
fc44390db3 forceCoeffs: Removed duplicate header writing
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2216
2016-08-24 16:01:29 +01:00
c6f9ed748a functionObjects::forces: Corrected file names when using the 'binData' option
Resolves bug-report http://bugs.openfoam.org/view.php?id=2214
2016-08-24 11:24:27 +01:00
655fb3841a foamToVTK::vtkTopo: Apply fix from #1633
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2213
2016-08-24 09:45:23 +01:00
5c9b80a083 functionObjects::volRegion: Cache integral properties for writeFileHeader 2016-08-24 09:32:34 +01:00
428b1d8866 Updated headers 2016-08-24 08:57:44 +01:00
962910bd43 lagrangian::Analytical: improved analytical integration for the U-equation
Patch contributed by Timo Niemi
In response to bug-report http://bugs.openfoam.org/view.php?id=2199
2016-08-23 22:03:24 +01:00
a778622dfa src/parallel/decompose: Remove dependency on "SCOTCH_ROOT" and repair "decompose/Allwclean"
Patch contributed by Bruno Santos
Resolves patch request http://bugs.openfoam.org/view.php?id=2212
2016-08-23 21:53:35 +01:00
c482490a60 etc/bashrc, etc/config.sh:
- "$FOAM_USER_APPBIN" and "$FOAM_USER_LIBBIN" have been added to
    "foamOldDirs" in "etc/bashrc" and "etc/config.sh/unset"

  - "$OPAL_PREFIX" is now undefined in the option "SYSTEMOPENMPI" within
    "etc/config.sh/mpi", but only if the path defined in this variable
    is cleaned when using "foamCleanPath".

  - "$OPAL_PREFIX" is now also conditionally undefined in
    "etc/config.sh/unset" when the path is picked up by "foamCleanPath".

Patch contributed by Bruno Santos
Resolved bug-report http://bugs.openfoam.org/view.php?id=2210
2016-08-23 21:02:55 +01:00
f75e69b5f7 wmake/rules/linux64.*KNL: Improved optimization option for Intel MIC (Knights Landing) processor
Patch contributed by Paul Edwards, Intel.
2016-08-22 16:27:46 +01:00
e6057ee3ec Corrected documentation in classes derived from temperatureCoupleBase
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2207
2016-08-22 14:31:40 +01:00
0ea2023ae0 codingStyleGuide: Improved formatting
Resolves bug-report http://bugs.openfoam.org/view.php?id=2194
2016-08-20 09:33:11 +01:00
181558028c septernion: Correct quaternion normalization after averaging
Resolves bug-report http://bugs.openfoam.org/view.php?id=2203
2016-08-19 20:32:30 +01:00
8e3dd09425 BUG: ensightSurfaceReader - enabled reading of data from sub-directory and updated field mask (See #215) 2016-08-18 15:29:56 +01:00
16b516bba3 ENH: noise functionality robustness improvements 2016-08-18 15:24:13 +01:00
9fb439bb46 BUG: Corrected FFTW_ARCH_PATH - patch contributed by Bruno Santos. Fixes #210 2016-08-18 11:22:25 +01:00
b075f10053 /primitives/triad: Initialize array to avoid warning from icpc 2016-08-18 11:22:15 +01:00
6635d2edfe ODESolvers::adaptiveSolver: Changed functions which need not be to non-virtual
Resolves warnings from clang
2016-08-18 10:36:52 +01:00
ab7dcca8a6 functionObjects::writeObjects: Corrected namespace for the definition of the NamedEnum
Resolves compilation failure with clang
2016-08-18 10:36:04 +01:00
4a766d28cb epsilonWallFunction, omegaWallFunction: Removed unused variabl 2016-08-18 08:23:54 +01:00
8d036e2750 multivariateScheme: Correct local typedef name 2016-08-17 23:04:00 +01:00
1d308b2ead Update header 2016-08-17 23:03:49 +01:00
4d2e628b61 primitives/hashes/SHA1: undef macros 2016-08-17 23:03:27 +01:00
a9280d103f sigWriteNow, sigStopAtWriteNow: Change runTimePtr_ to static member 2016-08-17 23:02:58 +01:00
30e456a641 fvDOM radiation model: Removed unreliable 'cacheDiv' option
Resolves bug-report http://bugs.openfoam.org/view.php?id=2182
2016-08-17 17:12:20 +01:00
b2e9655495 functionObjects::writeObjects: improved code and docs
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2090
2016-08-17 14:41:42 +01:00
e078fa031b viscosityModels::Casson: Added example specification for blood
Contributed by Sergey Sindeev
2016-08-17 13:46:46 +01:00
e670c3e356 viscosityModels::Casson: Updated constructor to avoid the need to specify the dimensions of the coefficients 2016-08-17 13:45:18 +01:00
40b0be0376 ODESolvers: Updated references to APA style 2016-08-17 10:27:15 +01:00
35f12bb6bd viscosityModels::Casson: New viscosity model
Description
    An incompressible Casson non-Newtonian viscosity model.

    References:
    \verbatim
        Casson, N. (1959).
        Rheology of disperse systems.
        In Proceedings of a Conference Organized by the
        British Society of Rheology.
        Pergamon Press, New York.

        Fournier, R. L. (2011).
        Basic transport phenomena in biomedical engineering.
        CRC Press.
    \endverbatim

Contributed by Sergey Sindeev
2016-08-17 09:38:17 +01:00
73cef20494 viscosityModels: State virtual functions are virtual also in the derived classes 2016-08-17 09:37:37 +01:00
79530dc8e3 surfacePatch.C: Corrected formatting 2016-08-17 08:08:21 +01:00
9a739863e5 functionObjects::writeObjects: Added option "writeOption"
Description
    Allows specification of different writing frequency of objects registered
    to the database.

    It has similar functionality as the main time database through the
    \c writeControl setting:
      - timeStep
      - writeTime
      - adjustableRunTime
      - runTime
      - clockTime
      - cpuTime

    It also has the ability to write the selected objects that were defined
    with the respective write mode for the requested \c writeOption, namely:
      - \c autoWrite - objects set to write at output time
      - \c noWrite   - objects set to not write by default
      - \c anyWrite  - any option of the previous two

    Example of function object specification:
    \verbatim
    writeObjects1
    {
        type        writeObjects;
        libs        ("libutilityFunctionObjects.so");
        ...
        objects     (obj1 obj2);
        writeOption anyWrite;
    }
    \endverbatim

Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2090
2016-08-16 23:41:22 +01:00
63010615ae fvMesh,dynamicRefineFvMesh: Rename writeObjects -> writeObject for consistency with regIOobject 2016-08-16 23:40:27 +01:00
14a0a94c01 dlLibraryTable: Add support for library path expansion
Patch contributed by Mattijs Janssens
Resolves patch request http://bugs.openfoam.org/view.php?id=2195
2016-08-16 16:12:19 +01:00
e44cc9697b AMIInterpolation: Make tracking across AMI more robust
If a suitable face an the receiving side of the AMI cannot be found the
particle is marked for deletion.
2016-08-16 11:33:27 +01:00
bc71a7d208 lagrangian: Delete lost particles on restart
Warning messages are generated for each particle deleted
2016-08-16 11:32:27 +01:00
3f82568b74 lagrangian::Cloud: Removed unused function 2016-08-16 11:31:51 +01:00
b23d80916b lagrangian:: hasWallImpactDistance() need not be virtual 2016-08-16 11:31:14 +01:00
aaf8819c92 tetPtI -> tetPti 2016-08-16 11:30:17 +01:00
72bd9fd6cd ParaView: GUI resource files in plugins are no longer supported
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2192
2016-08-16 08:46:39 +01:00
caa354aa95 codingStyleGuide: Corrected typos
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2193
2016-08-16 08:36:36 +01:00
e371de3a6f fvMatrixSolve: Set the solver name to that used to solve the components
Resolves bug-report http://bugs.openfoam.org/view.php?id=2189
2016-08-14 21:39:58 +01:00
ddd4f9f2ef functionObject: change default behavior of 'end()' to do nothing rather than calling execute and write
Time: call functionObject 'execute()' and 'end()' for last time-step

Now the operation of functionObject 'end()' call is consistent between running and post-processing
2016-08-12 21:46:21 +01:00
0f36cce1b5 Revert "functionObject: change default behavior of 'end()' to do nothing rather than calling execute and write"
This reverts commit 32e2e1bc76.
2016-08-12 21:34:37 +01:00
32e2e1bc76 functionObject: change default behavior of 'end()' to do nothing rather than calling execute and write 2016-08-12 21:28:00 +01:00
45409b3fdc LduMatrix/SolverPerformance: Changed nIterations from label to labelType corresponding to the type solved
Now the number of iterations to solve each component in a segregated
solution are stored and returned in the SolverPerformance class.

Resolves bug-report http://bugs.openfoam.org/view.php?id=2189
2016-08-12 14:56:03 +01:00
873628e7b4 ILList: Added doc for assignment 2016-08-12 13:28:56 +01:00
fc923ba55a OpenFOAM/containers/LinkedLists: Replaced partially specialized template classes with C++11 template aliases
This feature of C++11 avoids complex code duplication simplifies code maintenance
2016-08-12 13:21:05 +01:00
d048b857dc functionObjects::surfaceFieldValue: New rational name for the surfaceRegion functionObject
surfaceRegion will be the name of a class to provide support for surface
region selection.
2016-08-12 10:04:11 +01:00
659076c0fa LList, SLList: Added construction from and assignment to initializer_list
SLList: now a C++11 template alias rather than a wrapper-class.
2016-08-12 10:01:41 +01:00
f846706229 OpenFOAM/containers: Standardized assignment docs 2016-08-12 10:00:48 +01:00
ba413e1f9a ENH: minor adjustments to surfZoneIdentifier
- gearing to make it more reusable in triSurface
2016-08-12 10:05:01 +02:00
fc714ed67b ENH: surfaceCheck: survive triangles with duplicate vertices. Fixes #222 2016-08-31 16:47:36 +01:00
30442158b1 ENH: snappyHexMesh: added -region option (fixes #223) 2016-08-31 09:44:34 +01:00
66eb48c3a4 BUG: snappyHexMesh: patch intersections of mesh was using cell zone information.
This was going wrong in a fair few cases where you would get regions which
were delimited by a combination of intersections with unnamed surfaces (wall)
and named surfaces (faceZone surface) but not with either of these sets
individually. This would cause there to be unvisited cells (zone = -2)
next to a visited cells but separated by a named surface only (and not an
unnamed surface). Fixed by using direct surface intersection in the removal
part. Related to #66.
2016-08-19 10:48:35 +01:00
78bbfc4409 COMP: foamDebugSwitches: support for missing randomProcesses. Fixes #213. 2016-08-19 10:46:53 +01:00
ef720003c3 FixedList: Added void operator=(std::initializer_list<T>) 2016-08-11 22:02:05 +01:00
900c804bf0 HashTable: Added void operator=(std::initializer_list<Tuple2<Key, T>>) 2016-08-11 21:41:55 +01:00
d1d453f065 STYLE: relocate surfZoneIdentifier into OpenFOAM/meshes/Identifiers (issue #294)
Note that since these actually act more like 'patches'
(ie, contiguous addressing) it might be reasonable to rename as

    surfPatchIdentifier / surfacePatchIdentifier
2016-08-11 21:44:14 +02:00
b012e1c738 STYLE: relocate labelledTri into OpenFOAM/meshes/meshShapes (issue #294)
- was originally in triSurface, but is used in multiple other places
2016-08-11 20:00:09 +02:00
c7a291aca8 STYLE: relocate faceTriangulation, labelPairLookup into meshTools (issue #294)
- were in triSurface, but only actually used within meshTools
2016-08-11 19:38:29 +02:00
f81c7a036c DEFEATURE: remove unused surfacePatchIOList class (issue #294) 2016-08-11 21:22:21 +02:00
4dda4ad197 DEFEATURE: remove unused meshTriangulation class (issue #294) 2016-08-11 19:35:22 +02:00
5707b20e50 DEFEATURE: remove unused hashSignedLabel, sortLabelledTri classes (issue #294) 2016-08-11 17:55:40 +02:00
434afda523 specieReactionRates: Corrected namespace of the debug switches 2016-08-11 16:27:05 +01:00
9b36f9f445 chemistryModel: Minor clean-up 2016-08-11 16:26:50 +01:00
3c5d30867b chemPointISAT: Removed deprecated 'register' type specifier 2016-08-11 16:26:19 +01:00
82aa78a4d4 wmake/rules/linux.*Icc: Removed a new unhelpful warning message 2016-08-11 16:25:53 +01:00
40b3f8b62c functionObjects::volFieldValue: Updated to use the new volRegion functionObject 2016-08-11 16:25:27 +01:00
4e6ec7d20d functionObjects::specieReactionRates: Added volRegion support
Now the specie reaction rates may be averaged over the entire domain or
a specified cellZone.
2016-08-11 15:15:45 +01:00
7b788f0922 functionObjects::volRegion: General base-class to handle vol (cell) region processing
Renamed the original volRegion -> volFieldValue to clarify the purpose
of this class to process vol fields on a volRegion.
2016-08-11 15:11:19 +01:00
c79544b197 ENH: mergedSurf helper class (fixes #104)
- For merging meshedSurf content from parallel sources.
  Ensures zoneIds are properly preserved for sampling in parallel.

Current state
~~~~~~~~~~~~~

Current producers of the region information:
 * sampledTriSurfaceMesh

Current consumers of the region information:
 * nastran writer. The zone ids passed through as PSHELL Ids (with offset 1).

Limitations

  The per-face region association is preserved, but the face/element
  sort order gets lost in reconstruction. Would need to attach
  additional information to the sampled surface and use that for
  sorting, but this would also imply that sampled values be written
  indirectly (or resorted) too to match the order. Zone ids are passed
  through, but not their names. After reconstruction, zone ids are no
  longer contiguous. Re-sorting (as mentioned above) would solve this
  too, but again at the cost of more complexity when writing.
2016-08-11 13:25:51 +02:00
6afc9fb15d ENH: tetOverlapVolume - improved robustness. Fixes #207 2016-08-11 12:14:43 +01:00
582ee21ef0 ENH: plane - updated construct from components to optionally normalise the normal vector 2016-08-11 12:14:34 +01:00
f8bb01e9f1 STYLE: harmonize nastran writer with more standard method calls
- unhide indexing of element/property ids (pass as const parameters).
  Proper indexing is the responsiblity of the caller.
2016-08-10 21:05:15 +02:00
225c6777b2 functionObjects::specieReactionRates: New functionObject to write the domain averaged reaction rates for each specie for each reaction 2016-08-10 19:48:43 +01:00
cefe2ea541 BUG: singleCellMesh: writes constant mesh to 0 directory instead.
Fixes partially #93.
2016-08-10 15:49:09 +01:00
1fc2a73213 ENH: use meshedSurf API for surface writers (issue #104)
- Allows passing of additional information (per-face zone ids) or possibly
  other things, while reducing the number of arguments to pass.

- In sampledTriSurfaceMesh, preserve the region information that was
  read in, passing it onwards via the UnsortedMeshSurface content.

  The Nastran surface writer is currently the only writer making use
  of this per-face zone information.
  Passing it through as a PSHELL attribute, which should retain the
  distinction for parts. (issue #204)
2016-08-10 15:41:24 +02:00
9ab4bf4001 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-08-10 13:33:06 +01:00
44416dd44f ENH: sampledSets: warn for no fields (fixes #206) 2016-08-10 13:32:47 +01:00
eee0dd02c5 ENH: meshedSurf API for passing around points/faces (issue #104) 2016-08-10 14:09:09 +02:00
2da5570c92 functionObjects: Further simplification and rationalization using the fvMeshFunctionObject base-class 2016-08-10 12:29:19 +01:00
3dffee8a6a STYLE: change MeshedSurface 'faces' access to 'surfFaces' (related to issue #104)
- use surfFaces() to return the templated list of faces.
  This frees up the method 'faces()' to be used as a virtual method,
  which will be needed at a later stage.
2016-08-10 10:03:51 +02:00
8339b57255 List: Added void operator=(std::initializer_list<T>) 2016-08-09 20:36:32 +01:00
5b1ae76abf reconstructPar: Handle the copy of the 'uniform' directory when only 1 region is reconstructed
Resolves bug-report http://bugs.openfoam.org/view.php?id=2186
2016-08-09 16:42:48 +01:00
8509fc3ce4 BUG: blendingFactor function object updated to handle bounded schemes. Fixes #205 2016-08-09 15:38:40 +01:00
a29ff3f6f2 ENH: boundedConvection scheme - added access function to the underlying scheme 2016-08-09 15:33:46 +01:00
d73bf4af51 kOmegaSSTLM: Corrected coefficient in Fsublayer 2016-08-09 13:54:10 +01:00
c5630e5cb1 Corrected nullptr collateral damage
Resolves bug-report http://bugs.openfoam.org/view.php?id=2181
2016-08-08 15:38:53 +01:00
95962d7780 ENH: provide conversion to/from ccm meshes (issue #204) 2016-08-08 12:50:26 +02:00
1d194d1629 CONFIG: allow static or dynamic linkage for optional conversion utility 2016-08-08 11:58:52 +02:00
cce64df23c CONFIG: use src/conversion/Allwmake when building source
- existed, but was not being called
2016-08-08 11:38:38 +02:00
6f098748cc functionObjects: Separated writeFile and logFiles (previously writeFiles) from regionFunctionObject
Now the functionality to write single graph files or log files (vs time)
may be used in the creation of any form of functionObject, not just
those relating to a mesh region.
2016-08-07 15:23:55 +01:00
076c4c6e82 HashTable: Added C++11 initializer_list constructor
e.g.
    HashTable<label, string> table1
    {
        {"kjhk", 10},
        {"kjhk2", 12}
    };

    HashTable<label, label, Hash<label>> table2
    {
        {3, 10},
        {5, 12},
        {7, 16}
    };
2016-08-05 22:30:26 +01:00
2bb52eff6e Test-fileName: Added recent etcFiles.H 2016-08-05 17:25:56 +01:00
58f905ff70 C++11: Replaced the C NULL with the safer C++11 nullptr
Requires gcc version 4.7 or higher
2016-08-05 17:19:38 +01:00
7996a9138f C++11: Update compilation rules to specify C++11 support and conformance
The change from C++0x to C++11 allows all of C++11 functionality to be
used in OpenFOAM, in particular constructor delegation which avoids code
duplication or constructor helper functions.  However, this also means a
change to the minimum gcc version supported which is now 4.7 rather than
4.5.

Note that gcc-4.7 does not support the entire C++11 standard but does
support all of the functionality currently needed for further OpenFOAM
development.  The minimum gcc-version which supports the entire C++11
standard is 4.8 which is now the recommended minimum gcc version.
2016-08-05 16:28:19 +01:00
7a299ed7cb FixedList: Add constructors from iterators and C++11 initializer_list using C++11 constructor delegation 2016-08-05 16:25:18 +01:00
3c423d64d2 Test-List: Add demonstration of C++11 initializer list in conjunction with uniform initialization of vector
List<vector> list5
     {
         {5, 3, 1},
         {10, 2, 2},
         {8, 1, 0}
     };
2016-08-05 16:22:51 +01:00
d8abc128f9 ENH: provide conversion to/from AVL/FIRE meshes (issue #204) 2016-08-05 13:22:22 +02:00
74f2d7f0a3 ENH: cleanup starcd (prostar) mesh conversion (issue #204)
- Reduce code duplication by moving out common functionality
  into STARCDCore.
2016-08-05 10:35:55 +02:00
e5d9fd13c2 ENH: relocate meshSubsetHelper into dynamicMesh for re-use
- reuse for foamToTecplot360 and foamToVTK.
- remove dependency on vtkMesh where possible.
2016-11-09 23:33:24 +01:00
72ec8e0574 BrunDrippingInjection: Corrected default type of deltaStable 2016-08-05 08:26:45 +01:00
55065d6302 epsilonWallFunction, omegaWallFunction: Set generation to zero in laminar sub-layer
Improves stability for complex flows
2016-08-04 22:25:27 +01:00
7e4f200bd6 GIT: rearrange files for lib-conversion
- re-group according to file-format instead of reader/writer
2016-08-04 16:57:56 +02:00
b475ae851e DEFEATURE: remove samm, pro-am, prostar3 convertors (issue #204)
- these frontends are defunct and their formats were quite a mess.
  Prostar 4 versions (star4ToFoam, foamToStarMesh) should be used
  instead.
2016-08-05 11:05:30 +02:00
c5e364dd38 STYLE: Remove meshReaders/meshWriters namespace (issue #204)
- Relocate classes (STARCDMeshReader, STARCDMeshWriter)
  into fileFormats namespace instead.
2016-08-05 12:00:00 +02:00
b0dcf59307 ENH: ease access restrictions on meshReader data structures (issue #204)
- helps when implementing polyhedral readers.
2016-08-05 10:00:00 +02:00
dd659dccb0 BrunDrippingInjection: Simplified implementation 2016-08-04 15:20:53 +01:00
c022e5ade3 BrunDrippingInjection: Calculate drop diameter from the capillary length
The diameter of the drops formed are obtained from the local capillary
length multiplied by the \c dCoeff coefficient which defaults to 3.3.

Reference:
    Lefebvre, A. (1988).
    Atomization and sprays
    (Vol. 1040, No. 2756). CRC press.
2016-08-04 15:02:51 +01:00
6131d5c1a3 omegaWallFunction: Improved low-Reynolds number behavior and consistency with the epsilonWallFunction
Changed default mode of operation to use standard y+ based switching
rather than the previous ad hoc blending and added consistent handling
of the near-wall generation term.

This boundary condition provides a wall constraint on turbulnce specific
dissipation, omega for both low and high Reynolds number turbulence models.

The near-wall omega may be either blended between the viscous region and
logarithmic region values using:

    \f[
        \omega = sqrt(\omega_{vis}^2 + \omega_{log}^2)
    \f]

where

\vartable
    \omega_{vis} | omega in viscous region
    \omega_{log} | omega in logarithmic region
\endvartable

see eq.(15) of:
\verbatim
    Menter, F., Esch, T.
    "Elements of Industrial Heat Transfer Prediction"
    16th Brazilian Congress of Mechanical Engineering (COBEM),
    Nov. 2001
\endverbatim

or switched between these values based on the laminar-to-turbulent y+ value
derived from kappa and E.  Recent tests have shown that the standard
switching method provides more accurate results for 10 < y+ < 30 when used
with high Reynolds number wall-functions and both methods provide accurate
results when used with continuous wall-functions.  Based on this the
standard switching method is used by default.
2016-08-04 10:59:23 +01:00
712f62773a epsilonWallFunction: Updated to work with both low- and high-Reynolds number turbulence models
This boundary condition provides a turbulence dissipation wall constraint
for low- and high-Reynolds number turbulence models.

The condition can be applied to wall boundaries for which it
- calculates \c epsilon and \c G
- specifies the near-wall epsilon value

where

\vartable
    epsilon | turblence dissipation field
    G       | turblence generation field
\endvartable

The model switches between laminar and turbulent functions based on the
laminar-to-turbulent y+ value derived from kappa and E.

Recent tests have shown that this formulation is more accurate than
the standard high-Reynolds number form for 10 < y+ < 30 with both
standard and continuous wall-functions.

Replaces epsilonLowReWallFunction and should be used for all
low-Reynolds number models for which the epsilonLowReWallFunction BC was
recommended.
2016-08-04 10:52:12 +01:00
273197e20e TurbulenceModels::derivedFvPatchFields: standardized the cell index of the 'faceCell' 2016-08-04 10:51:09 +01:00
4652677f76 ORourkeCollision: Corrected probability test
Resolves bug-report http://bugs.openfoam.org/view.php?id=2097
2016-08-04 10:04:06 +01:00
777bc83d14 FixedList: Corrected checkSize
Resolves bug-report http://bugs.openfoam.org/view.php?id=2178
2016-08-03 19:45:31 +01:00
449a4e7353 surfaceFilmModels::BrunDrippingInjection: New dripping model based on the Rayleigh-Taylor stability analysis
of film flow on an inclined plane by Brun et.al.

    Brun, P. T., Damiano, A., Rieu, P., Balestra, G., & Gallaire, F. (2015).
    Rayleigh-Taylor instability under an inclined plane.
    Physics of Fluids (1994-present), 27(8), 084107.
2016-08-02 21:35:37 +01:00
0a2c2d76de RunFunctions: corrected typo $SUFFIX -> $LOG_SUFFIX
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2176
2016-08-02 21:32:38 +01:00
70ba9e0cc0 For issue #202, re-adjust commit c3ec65d35b to use zero-gradient instead
- consistent with approach used elsewhere. Generates smaller files.
2016-08-02 21:56:40 +02:00
2ab457015d tutorials: corrected scripts ']; then' -> ' ]; then'
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2175
2016-08-02 19:15:40 +01:00
a95ca8293a BUG: runParallel ignores presence of log file (closes #203)
- was a small typo
2016-08-02 18:31:50 +02:00
2e1557a79e tutorials Allrun scripts: Update running of postProcess application
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2173
2016-08-02 16:24:28 +01:00
c3ec65d35b ENH: decomposePar -cellDist misses patches (issue #202)
- Propagate cellDist information from internal to patch fields too

NOTE: uses C++11 'auto' and a range-based for loop
2016-08-02 16:39:20 +02:00
d01eb45cfc List: Reinstated construction from two iterators and added construction from an initializer list
Until C++ supports 'concepts' the only way to support construction from
two iterators is to provide a constructor of the form:

        template<class InputIterator>
        List(InputIterator first, InputIterator last);

which for some types conflicts with

        //- Construct with given size and value for all elements
        List(const label, const T&);

e.g. to construct a list of 5 scalars initialized to 0:

    List<scalar> sl(5, 0);

causes a conflict because the initialization type is 'int' rather than
'scalar'.  This conflict may be resolved by specifying the type of the
initialization value:

    List<scalar> sl(5, scalar(0));

The new initializer list contructor provides a convenient and efficient alternative
to using 'IStringStream' to provide an initial list of values:

    List<vector> list4(IStringStream("((0 1 2) (3 4 5) (6 7 8))")());

or

    List<vector> list4
    {
        vector(0, 1, 2),
        vector(3, 4, 5),
        vector(6, 7, 8)
    };
2016-08-02 09:31:41 +01:00
b8614eca07 Make/options: Removed duplicate entries
Thanks to Bruno Santos for providing the script to check the files
Resolves bug-report http://bugs.openfoam.org/view.php?id=2169
2016-08-01 20:55:16 +01:00
32fe670d1e tutorials/incompressible/boundaryFoam/boundaryWallFunctionsProfile: Corrected typo
Resolves bug-report http://bugs.openfoam.org/view.php?id=2170
2016-08-01 20:10:19 +01:00
778abb4087 tutorials/multiphase/reactingTwoPhaseEulerFoam: Corrected regular expressions
Resolves bug-report http://bugs.openfoam.org/view.php?id=2167
2016-08-01 17:11:44 +01:00
90d6c956da fvAgglomerationMethods/Allwmake: Removed reference to Scotch
Resolves bug-report http://bugs.openfoam.org/view.php?id=2168
2016-08-01 17:05:16 +01:00
bfbe1e32be DimensionedField<scalar, volMesh> -> volScalarField::Internal
DimensionedField<vector, volMesh> -> volVectorField::Internal
2016-08-01 14:28:54 +01:00
cd2b0ff742 meshToMeshTemplates: Updated non-const access to the source patch field
Resolves bug-report http://bugs.openfoam.org/view.php?id=2165
2016-08-01 14:28:18 +01:00
49c7b37705 BUG: 'processor' in directory name causes issues (issue #199)
- previously just detected the presence of "processor" in the case
  path name. Restrict to checking the final portion.
  Does not solve all problems, but solves ones like this:

      test-new-processor-generation/....
2016-08-01 14:11:05 +02:00
e9edf89a5d BUG: maxDeltaxyz LES delta - updated calculation. Fixes #200 2016-08-01 12:59:24 +01:00
f0fdd1c203 scalarTransport function: renamed scalar field -> s 2016-07-31 17:12:49 +01:00
ff9ad39f82 CrankNicolsonDdtScheme: Corrected handling of the boundary field to avoid premature reset of the time-index
Resolves bug-report http://bugs.openfoam.org/view.php?id=2162
2016-07-29 17:48:04 +01:00
157fa46f9c tutorials/multiphase/interDyMFoam/ras/floatingObject/constant/dynamicMeshDict.sixDoF: Renamed 'rho' -> 'rhoSolid'
to avoid name clash
2016-07-29 17:47:20 +01:00
46ba7267de TurbulenceModels: Reorganized support macros to simplify the creation of additional turbulence model libraries 2016-07-29 15:59:09 +01:00
04f73903b4 tutorials/incompressible/simpleFoam/T3A: ERCOFTAC T3A 3% test-case for the kOmegaSSTLM model
References:
    Savill, A. M. (1993).
    Some recent progress in the turbulence modelling of by-pass transition.
    Near-wall turbulent flows, 829-848.

    Savill, A. M. (1996).
    One-point closures applied to transition.
    In Turbulence and transition modelling (pp. 233-268).
    Springer Netherlands.

Based on case contributed by Florian Schwertfirm, Kreuzinger und Manhart Turbulenz GmbH.
2016-07-29 10:51:42 +01:00
d9aa056163 TurbulenceModels::kOmegaSSTLM: New correlation-based turbulent transition model
Description
    Langtry-Menter 4-equation transitional SST model
    based on the k-omega-SST RAS model.

    References:
        Langtry, R. B., & Menter, F. R. (2009).
        Correlation-based transition modeling for unstructured parallelized
        computational fluid dynamics codes.
        AIAA journal, 47(12), 2894-2906.

        Menter, F. R., Langtry, R., & Volker, S. (2006).
        Transition modelling for general purpose CFD codes.
        Flow, turbulence and combustion, 77(1-4), 277-303.

        Langtry, R. B. (2006).
        A correlation-based transition model using local variables for
        unstructured parallelized CFD codes.
        Phd. Thesis, Universität Stuttgart.

Implemented by Henry G. Weller, CFD Direct in collaboration with Florian
Schwertfirm, Kreuzinger und Manhart Turbulenz GmbH.
2016-07-29 10:45:49 +01:00
51ea906a20 fvMatrixSolve: Corrected ref() access to field
Resolves bug-report http://bugs.openfoam.org/view.php?id=2163
2016-07-28 18:00:21 +01:00
84d90563bc Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-07-28 13:52:27 +01:00
1a69e4315b functionObjects::wallShearStress: Corrected dimensions for compressible cases 2016-07-28 13:51:13 +01:00
a867e68573 kOmegaSSTSAS: Updated header 2016-07-28 13:50:58 +01:00
3dd3288561 TurbulenceModels::kOmegaSST.*: Updated source-terms and associated functions to use volScalarField::Internal
This is more efficient, avoids divide-by-0 when evaluating unnecessary
boundary values and avoids unnecessary communications when running in parallel.
2016-07-28 13:48:38 +01:00
3a3966d400 wmake/rules/linux.*Icc: Updated for icpc (ICC) 16.0.3 20160415 2016-07-28 13:47:44 +01:00
466a2631c7 Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus 2016-07-27 08:56:24 -07:00
14f5239e5b ENH: Adding optional uniform jump switch to fan BC 2016-07-27 08:55:52 -07:00
785b32830d STYLE: fanFvPatchField - updated example usage to reflect change in CSV specification. Fixes #177 2016-07-27 13:06:22 +01:00
b8cf59e869 BUG: snappyHexMesh: compacting list w/o checking for aliasing. Fixes #197 2016-07-27 13:06:01 +01:00
6539c1d311 Merge branch 'develop' 2016-07-27 12:51:50 +01:00
b2722eb66b STYLE: externalCoupledFunctionObject: typo 2016-07-27 10:38:58 +01:00
143800ab3d BUG: Turbulence DFSEM - protect sigFpe for reconstruct - see #194 2016-07-26 15:33:10 +01:00
f7999317ac Merge branch 'style-compile-def' into 'develop'
ENH: distinguish OpenFOAM version for user-coding (fixes #195)

The pre-processor macro 'OPENFOAM_PLUS' is defined with a numerical
value equal to the currently compatible version number.

This can be used judiciously within user coding to help with minor
differences between OpenFOAM versions. For example,

    #ifdef OPENFOAM_PLUS
        #if (OPENFOAM_PLUS >= 1612)
        ...
        #endif
    #endif

or simply

    #if (OPENFOAM_PLUS >= 1612)
    ...
    #endif

See merge request !56
2016-07-26 15:27:24 +01:00
e2935fa680 Merge branch 'fix-systemcall' into 'develop'
replace system() call with vfork/exec combination (issue #185)

Tested systemCall function object, dynamicCode, but should be rechecked with IB+openmpi
@Prashant

See merge request !55
2016-07-26 15:26:00 +01:00
b460e096ae Merge branch 'feature-symlinks' into 'develop'
ENH: OSspecific - softlink handling (fixes #164)

Links are followed in most cases, with some notable exceptions:

- mv, mvBak:
  renames the link, not the underlying file/directory

- rmDir:
  remove the symlink to a directory, does not recurse into the
  underlying directory

See merge request !51
2016-07-26 15:25:33 +01:00
9b481e7992 foamNewBC: removes phip completely for fixedValue condition 2016-07-26 15:25:18 +01:00
1b55666ec7 ENH: distinguish OpenFOAM version for user-coding (fixes #195)
The pre-processor macro 'OPENFOAM_PLUS' is defined with a numerical
value equal to the currently compatible version number.

This can be used judiciously within user coding to help with minor
differences between OpenFOAM versions. For example,

    #ifdef OPENFOAM_PLUS
        #if (OPENFOAM_PLUS >= 1612)
        ...
        #endif
    #endif

or simply

    #if (OPENFOAM_PLUS >= 1612)
    ...
    #endif
2016-07-26 14:02:40 +02:00
2d96fc5011 BUG: mapFields function object - evaluate constraint patches after mapping. Fixes #190 2016-07-26 12:05:15 +01:00
bac94fc564 ENH: regIOobject: use reverse order scatter for dictionary
Fixes #192
2016-07-25 14:14:05 +01:00
ee9e7cf037 lagrangian::BrownianMotionForce: Changed from a cubic to a spherical distribution
See also: StochasticDispersionRAS
Resolves bug-report http://bugs.openfoam.org/view.php?id=2153
2016-07-23 11:53:48 +01:00
5d3b25a472 BrownianMotionForce: Removed the spurious additional 'eta'
Resolves bug-report http://bugs.openfoam.org/view.php?id=2153
2016-07-22 21:12:09 +01:00
2564362542 decomposePar: Speed-up decomposing with constraints
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2159
2016-07-22 17:19:21 +01:00
799b2fc748 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-07-22 16:58:22 +01:00
aa30d0e7d5 checkMesh: Added option to write sets
- the checking for point-connected multiple-regions now also writes the
    conflicting points to a pointSet
  - with the -writeSets option it now also reconstructs & writes pointSets
2016-07-22 16:53:49 +01:00
5344c7eb26 lagrangian::BrownianMotion: Corrected Boltzmann constant used in the force expression
Resolves bug-report http://bugs.openfoam.org/view.php?id=2153
2016-07-22 16:15:04 +01:00
cd8be89b28 BUG: runTimePostProcessing - correct the glyph behaviour when dealing with cell data. Fixes #186 2016-07-22 15:32:17 +01:00
e6f9c67b64 snappyHexMesh: points on more than one cell region now duplicated if detected on any processor
rather than all processor
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=1936
2016-07-22 14:48:38 +01:00
d51687eb66 forces: Updated reading of 'nu'
Resolves bug-report http://bugs.openfoam.org/view.php?id=2158
2016-07-22 09:56:02 +01:00
43df3e4192 reconstructPar: Added support for decomposing "uniform" directories in multi-region cases
Resolves bug-report http://bugs.openfoam.org/view.php?id=2156
2016-07-20 18:47:58 +01:00
ef54ab7c59 decomposePar: Added support for decomposing "uniform" directories in multi-region cases
Resolves bug-report http://bugs.openfoam.org/view.php?id=2156
2016-07-20 16:41:45 +01:00
2d695acf49 Merge branch 'master' of develop.openfoam.com:Development/OpenFOAM-plus 2016-07-19 10:53:34 -07:00
4dcfd245d6 BUG: Taken out mesh flux from the hEqn for Solid to Gas reactions 2016-07-19 10:51:50 -07:00
b8bb388ffd reactingEulerFoam, twoPhaseEulerFoam: Added fvOption sources to the face-based momentum equations 2016-07-19 16:33:07 +01:00
115a291b8a postProcess: Added call to functionObject::end() at end of time-loop
Resolves bug-report http://bugs.openfoam.org/view.php?id=2148
2016-07-19 11:57:37 +01:00
6f84555305 Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-07-18 16:09:17 +01:00
c4c60fad80 BUG: polyMesh::movePoints: clear cellTree since gets constructed using current geometry
so will be out of date (w.r.t bounding box, subdivisions) when the mesh moves.
Only when all cells stays in all the same boxes can you skip rebuilding it
so this was not deemed worthwhile. Fixes #172
2016-07-18 16:07:15 +01:00
dad1fd51c5 Scalar.H: Minor reorganization 2016-07-18 16:02:29 +01:00
e46e25fdcc Merge branch 'style-codedbc-cleanup' into 'develop'
STYLE/ENH: reduce code duplication for coded boundary conditions (issue #184)

- relocate common dictionary output into codedBase class

@Mattijs please test with a few examples as well

See merge request !54
2016-07-18 15:19:22 +01:00
586b7ca30e STYLE: codedBase: indentation 2016-07-18 15:18:40 +01:00
5f85329c85 SVD: VSinvUt is not always needed and is now calculated and returned by the 'VSinvUt()' function
rather than being calculated on construction and stored as member data.

The convergence warning has be replaced with the 'convergence()' member
function which returns 'true' if the SVD iteration converged, otherwise 'false'.
2016-07-18 13:15:25 +01:00
fa73844438 scalarMatrices: update [i][j] -> (i, j) 2016-07-18 13:12:26 +01:00
8bb78dda60 ENH: provide a vfork/exec version of system (issue #185)
The normal library system() command uses 'fork', which causes
problems on IB+OPENMPI.

STYLE: add Foam:: qualifier to system calls to make them easier to spot.
2016-07-18 13:37:39 +02:00
b3c9e9d277 ISAT::chemPointISAT: Use scalarMatrices::SVD 2016-07-18 07:49:53 +01:00
13e8fce173 wmake: Use functions from wmakeFunctions to avoid code duplication
wclean: added support for automatic searching up the tree for the Make directory if in a sub-directory
2016-07-17 22:59:55 +01:00
8f16204390 basicMultiComponentMixture: Improved the handling of Ydefault 2016-07-17 22:59:25 +01:00
1d57269680 TDACChemistryModel: New chemistry model providing Tabulation of Dynamic Adaptive Chemistry
Provides efficient integration of complex laminar reaction chemistry,
combining the advantages of automatic dynamic specie and reaction
reduction with ISAT (in situ adaptive tabulation).  The advantages grow
as the complexity of the chemistry increases.

References:
    Contino, F., Jeanmart, H., Lucchini, T., & D’Errico, G. (2011).
    Coupling of in situ adaptive tabulation and dynamic adaptive chemistry:
    An effective method for solving combustion in engine simulations.
    Proceedings of the Combustion Institute, 33(2), 3057-3064.

    Contino, F., Lucchini, T., D'Errico, G., Duynslaegher, C.,
    Dias, V., & Jeanmart, H. (2012).
    Simulations of advanced combustion modes using detailed chemistry
    combined with tabulation and mechanism reduction techniques.
    SAE International Journal of Engines,
    5(2012-01-0145), 185-196.

    Contino, F., Foucher, F., Dagaut, P., Lucchini, T., D’Errico, G., &
    Mounaïm-Rousselle, C. (2013).
    Experimental and numerical analysis of nitric oxide effect on the
    ignition of iso-octane in a single cylinder HCCI engine.
    Combustion and Flame, 160(8), 1476-1483.

    Contino, F., Masurier, J. B., Foucher, F., Lucchini, T., D’Errico, G., &
    Dagaut, P. (2014).
    CFD simulations using the TDAC method to model iso-octane combustion
    for a large range of ozone seeding and temperature conditions
    in a single cylinder HCCI engine.
    Fuel, 137, 179-184.

Two tutorial cases are currently provided:
    + tutorials/combustion/chemFoam/ic8h18_TDAC
    + tutorials/combustion/reactingFoam/laminar/counterFlowFlame2D_GRI_TDAC

the first of which clearly demonstrates the advantage of dynamic
adaptive chemistry providing ~10x speedup,

the second demonstrates ISAT on the modest complex GRI mechanisms for
methane combustion, providing a speedup of ~4x.

More tutorials demonstrating TDAC on more complex mechanisms and cases
will be provided soon in addition to documentation for the operation and
settings of TDAC.  Also further updates to the TDAC code to improve
consistency and integration with the rest of OpenFOAM and further
optimize operation can be expected.

Original code providing all algorithms for chemistry reduction and
tabulation contributed by Francesco Contino, Tommaso Lucchini, Gianluca
D’Errico, Hervé Jeanmart, Nicolas Bourgeois and Stéphane Backaert.

Implementation updated, optimized and integrated into OpenFOAM-dev by
Henry G. Weller, CFD Direct Ltd with the help of Francesco Contino.
2016-07-17 15:13:54 +01:00
2d54b1d42b fvPatchField: Minor reformatting 2016-07-17 14:45:24 +01:00
7cbe9153b2 LUscalarMatrix: Added processor-local matrix inverse function 2016-07-17 14:44:50 +01:00
e07327fef4 ENH: provide access to the underlying patch types of generic patches (issue #188) 2016-07-15 16:24:46 +02:00
30cf340d8b uint: Changed 'uint' to 'unsigned int'
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2152
2016-07-15 11:44:56 +01:00
2f3945e6b3 STYLE: missing include in codeStream test dictionary 2016-07-15 09:05:44 +02:00
813a1d69fb Merge branch 'develop' of develop.openfoam.com:Development/OpenFOAM-plus into develop 2016-07-13 11:40:15 +01:00
9e2259c19c STYLE: clean out clutter in paraview config files (issue #176)
Now reduced to 3 environment variables:
    ParaView_DIR         - paraview installation directory
    ParaView_INCLUDE_DIR - paraview include directory
    PV_PLUGIN_PATH       - paraview plugin directory for OpenFOAM modules

Previously also had (ParaView_MAJOR, ParaView_VERSION).

ThirdParty makeParaView adjusted accordingly.

ENH: improved configuration possibility for non-ThirdParty paraview
installation.

BUG: csh foamPV alias was completely incorrect.
2016-07-13 09:57:58 +02:00
ab84d6941f Updated template formatting to C++11 2016-07-12 20:03:29 +01:00
c535f6a3c4 ODESolvers::seulex: Corrected 'expo' and added 'table_' resize 2016-07-12 20:02:16 +01:00
787b19c4e4 STYLE: cleanup compiler settings (issue #176)
- export/setenv WM_COMPILER_TYPE as suggested by Mattijs.

- for overall consistency, don't carp about an unset WM_COMPILER_TYPE,
  since this would only be on the first instance (prior to the
  export/setenv) and would be confusing about why/when this message
  may occur.

- reduce clutter: only use (system|ThirdParty) for WM_COMPILER_TYPE.
  Drop the old 'OpenFOAM' setting for WM_COMPILER_TYPE, which was
  transitional in early 2011.

- make the error messages more meaningful
2016-07-12 17:19:06 +02:00
fae40c5def STYLE: use POSIX 'unset -f' for functions (affects dash) 2016-09-29 14:10:49 +02:00
9a82743d32 STYLE: bump to v1609+ for foundation merge version 2016-09-29 12:00:00 +02:00
ecfbdce3da ENH: avoid deprecated resource xml when building paraview plugins (fixes #181)
- remove old VTK_CONVEX_POINT_SET code, since VTK_POLYHEDRON exists
  since several years

ENH: improve robustness of paraFoam script

- only check the relevant plugin types,
  fallback to native reader if needed/possible.
2016-07-12 11:17:57 +02:00
ff49c1b882 foamCleanPolyMesh: No need to warn about missing 'polyMesh' directories 2016-07-12 09:07:15 +01:00
1c38fbcef0 Updated headers 2016-07-12 09:07:04 +01:00
b00e67ca37 foamChemistryReader: Added support for elements and specie composition
Based on a patch contributed by Francesco Contino, Tommaso Lucchini,
Gianluca D’Errico, Hervé Jeanmart, Nicolas Bourgeois and Stéphane
Backaert.
2016-07-12 09:05:00 +01:00
a9fed233db CONFIG: remove engridFoam start script
- no engrid development since 2013
2016-07-12 08:19:54 +02:00
a6a8069d84 BUG: incorrect wmakePrintBuild -check behaviour when outside of git (issue #174)
- return 0 if not under git, since nothing particular can be said
  about the build number.

- explicitly define which git-dir is to be used.
  This ensure we don't accidentally get some values from some unrelated
  project in the parent directory.
2016-07-12 17:37:30 +02:00
a5d7374737 ODESolvers: Add support for efficient ODE solver resizing
Note: this reuses the existing storage rather than costly reallocation
which requires the initial allocation to be sufficient for the largest
size the ODE system might have.  Attempt to set a size larger than the
initial size is a fatal error.
2016-07-11 17:27:04 +01:00
b36e1c7c1b Merge branch 'master-update' into 'master'
Master update for adjusted config and compile with WM_LABEL_SIZE=64



See merge request !52
2016-07-11 11:49:32 +01:00
47b9b3a88a AllwmakeParseArguments: Correct call to wmake -all
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2146
2016-07-10 22:04:50 +01:00
6a8bac9235 functionObjects: Update documentation 2016-07-09 22:08:11 +01:00
08bd802b42 checkGeometry, moveDynamicMesh: Convert processor IDs to 'List<label>'
Resolves bug-report http://bugs.openfoam.org/view.php?id=2140
2016-07-09 20:47:06 +01:00
79e31173bd wmakeFunctions: Added '()' to depToSource definition
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2144
2016-07-09 20:45:46 +01:00
9f682a0c5a functionObjects::systemCall: Updated documentation 2016-07-09 14:23:27 +01:00
6e95af9d58 functionObjects: Removed superfluous controlDict files 2016-07-09 14:23:01 +01:00
cdb5d024f0 wmake: Simplified handling of '-j' option to sub-processes 2016-07-09 14:22:29 +01:00
c022898851 wmakeLnIncludeAll: Add '-update' option 2016-07-09 14:22:14 +01:00
c3f50d3c2b wmakeLnInclude: Minor simplifications and reformatting 2016-07-09 14:21:44 +01:00
5b28e12ad3 wmakeCollect: Use 'mktemp' to create the temporary Makefiles
to avoid file names which are two long for the standard GNU/Linux file systems.
2016-07-09 14:20:31 +01:00
7d553a1853 wmakeFunctions: Added a faster bash version of 'depToSource' 2016-07-09 14:19:47 +01:00
bbc43dd66e wmakeCollect: Create the makefiles in the platforms directory 2016-07-09 09:59:46 +01:00
02e14ffd4b wmakeLnIncludeAll: 'sync' does not guarantee synchronization of the links
A simple 'sleep' is more reliable.
2016-07-08 16:35:40 +01:00
23ea3b364e wmakeLnIncludeAll: Improved messages 2016-07-08 14:02:57 +01:00
b87703bd46 fvcCellReduce: Add support for optional initial value
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2143
2016-07-08 11:54:30 +01:00
c4390f7059 laplacianFoam: Added support for fvOptions 2016-07-08 11:34:00 +01:00
10ad855d8d wmake: Improve messages from wclean, wrmdep and wmakeLnIncludeAll 2016-07-08 10:57:08 +01:00
d7e6c04855 wmakeLnIncludeAll: When running parallel wait for the wmakeLnInclude jobs to complete
then synchronize the file system to ensure all links are flushed before
compilation starts
2016-07-08 08:22:28 +01:00
5d594d3f24 ENH: Adding support to moving mesh to activePressureForceBaffle 2016-07-07 10:19:56 -07:00
a7fa5699df AllwmakeParseArguments: Filter-out '-q' option to avoid recusion 2016-07-07 16:22:08 +01:00
04afdaffc7 reactingTwoPhaseEulerFoam/pUf/UEqns: Changed naming convention for the dmdt's
for consistency with HeatAndMassTransferPhaseSystem.C
Resolves bug-report http://bugs.openfoam.org/view.php?id=2141
2016-07-07 14:36:10 +01:00
c15eea16f1 wmakeLnIncludeAll: Now a bash script
Uses the 'wait -n' builtin to avoid the use of non-POSIX 'sleep' commands
2016-07-07 12:09:49 +01:00
5f49df4a0a COMP: fftw needs int (not long) for its dimensionality (issue #175)
- explicitly use List<int> instead List<label> for API compatibility,
  even when 64-bit labels are in use.
2016-07-07 11:20:28 +02:00
fcb0b3a42d COMP: fftw needs int (not long) for its dimensionality (issue #175)
- explicitly use List<int> instead List<label> for API compatibility,
  even when 64-bit labels are in use.
2016-07-07 11:20:28 +02:00
e799329515 COMP: template ambiguity for 64-bit labels (issue #175) 2016-07-07 11:17:09 +02:00
b99515ea95 COMP: template ambiguity for 64-bit labels (issue #175) 2016-07-07 11:17:09 +02:00
7e53be1560 Reacting solvers: Added check for the existence of the inert specie 2016-07-06 17:45:34 +01:00
bccf754d24 chemkinToFoam: Added support for converting elements and species composition
Based of patch contributed by Francesco Contino, Tommaso Lucchini,
Gianluca D’Errico, Hervé Jeanmart, Nicolas Bourgeois and Stéphane
Backaert.
2016-07-06 16:24:56 +01:00
2ed6b4da92 STYLE: documentation typo in EulerCoordinateRotation, add external reference 2016-07-06 11:47:10 +02:00
de75e2f918 fvOptions::limitVelocity: New fvOption to limit the maximum velocity magnitude
e.g. to avoid excessive unphysical velocities generated during slamming events in
incompressible VoF simulations

Usage
    Example usage:
    limitU
    {
        type            limitVelocity;
        active          yes;

        limitVelocityCoeffs
        {
            selectionMode   all;
            max             100;
        }
    }
2016-07-06 10:17:21 +01:00
b23b137ff8 fvOptions::tabulatedAccelerationSource: Minor update to doc 2016-07-06 10:16:57 +01:00
29e5fd7bda Updated header 2016-07-06 10:16:37 +01:00
48e160dce8 fvOptions::limitTemperature: Simplify controls and make documentation consistent with the code 2016-07-06 10:15:47 +01:00
dc5c42701c BUG: config.csh: wrong variable. Fixes #176 2016-07-06 09:23:55 +01:00
c1fb5e9021 CONFIG: rename config file to avoid premature filtering of its name 2016-07-06 08:11:42 +02:00
1a9112e1b2 CONFIG: rename config file to avoid premature filtering of its name 2016-07-06 08:11:42 +02:00
6ed05f0cd3 STYLE: mention suppression of banner for surfaceMeshInfo, ... (issue #125) 2016-07-06 07:43:05 +02:00
898b51c8a3 wmakePrintBuild -check: exit 0 if not a git repository 2016-07-05 21:50:34 +01:00
8a93e13df3 reactingEulerFoam dragModels: New models Beetstra, Tenneti
Contributed by Alberto Passalacqua, Iowa State University

Foam::dragModels::Beetstra
    Drag model of Beetstra et al. for monodisperse gas-particle flows obtained
    with direct numerical simulations with the Lattice-Boltzmann method and
    accounting for the effect of particle ensembles.

    Reference:
    \verbatim
        Beetstra, R., van der Hoef, M. A., & Kuipers, J. a. M. (2007).
        Drag force of intermediate Reynolds number flow past mono- and
        bidisperse arrays of spheres.
        AIChE Journal, 53(2), 489–501.
    \endverbatim

Foam::dragModels::Tenneti
    Drag model of Tenneti et al. for monodisperse gas-particle flows obtained
    with particle-resolved direct numerical simulations and accounting for the
    effect of particle ensembles.

    Reference:
    \verbatim
        Tenneti, S., Garg, R., & Subramaniam, S. (2011).
        Drag law for monodisperse gas–solid systems using particle-resolved
        direct numerical simulation of flow past fixed assemblies of spheres.
        International Journal of Multiphase Flow, 37(9), 1072–1092.
    \verbatim
2016-07-05 16:10:07 +01:00
ec43e2cf5a Updated headers 2016-07-05 16:09:56 +01:00
34972962a4 reactingEulerFoam/interfacialCompositionModels: Minor reformatting 2016-07-05 16:09:39 +01:00
9e1486fee5 checkMesh, moveDynamicMesh: option -checkAMI writes the reconstructed AMI weights
Patch contributed by Mattijs Janssens
2016-07-05 15:35:16 +01:00
1e82e1a1dd CONFIG: use ThirdParty boost, FFTW instead of system versions
- many systems may not have boost or FFTW installed, or in an older
  version. Using ThirdParty for them should lead to a more robust
  build process.
2016-07-05 16:15:03 +02:00
aad28cbb78 wmakeCollect: Name the object makefiles based on the object path
Ensures the order of compilation relates to the location of the source files
2016-07-05 14:53:26 +01:00
6494f0378e BUG: randomProcesses/Allwmake not being called (fixes #171) 2016-07-05 14:43:59 +02:00
948e10841b wmakeCollect: Support simultaneous builds of different target architectures or compilers 2016-07-05 10:24:08 +01:00
e8b098121c wmake: execute wmakeLnIncludeAll once with options 'queue' and 'update' 2016-07-05 07:54:45 +01:00
af8e0f1443 AllwmakeParseArguments: Moved all parallel processing options into wmake
and added support for queue scheduling option '-q', '-queue'

Now the 'Allwmake' scripts execute 'wmake -all' to handle parallel
processing in a general way, avoiding code duplication.
2016-07-04 22:30:20 +01:00
8abdc36398 Allwmake: Simplified by removing 'doc' option
It is better to run doc/Allwmake or doc/Doxygen/Allwmake and provide the
required options.
2016-07-04 22:28:19 +01:00
f835565372 steadyParticleTracksTemplates: Corrected correspondence between function declaration and definition 2016-07-04 10:44:08 +01:00
91a8421241 wmakeLnIncludeAll: Corrected type 2016-07-04 10:27:43 +01:00
9e712bbfc7 wmakeLnIncludeAll: Use 'wait -n' rather than and arbitrary 'sleep' when limiting the number of jobs 2016-07-04 09:39:28 +01:00
417ac33aca functionObjects: Updated documentation
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2138
2016-07-03 23:16:29 +01:00
7093f478e4 wmake: use the new parallel wmakeLnIncludeAll option if WM_NCOMPPROCS is set 2016-07-03 23:11:16 +01:00
6b77d86563 wmakeCollect: Experimental scheduler for wmake to speed-up parallel compilations
wmakeCollect collects the compilation commands for the all of the object
files to be compiled into a single makefile which is passed to make to
schedule the compilations in parallel efficiently.

Before wmakeCollect can be called the lnInclude directories must be
up-to-date and after wmakeCollect the linkage stage of the compilation
must executed using wmake.

This entire process is now handled by wmake using the new '-queue' or
'-q' option to compile sections of the OpenFOAM source tree or the
entire tree efficiently.  The number of cores the compilation executes
on may be specified either using the WM_NCOMPPROCS variable or the '-j'
option.

To efficiently compile OpenFOAM after a 'git pull' the '-update' option
is provided which updates lnInclude directories, dep files and removes
deprecated files and directories.  This option may be used with '-q':

    wmake -q -update
2016-07-03 22:55:16 +01:00
17bec8aab2 wmakeLnIncludeAll: Added -j option for parallel operation 2016-07-03 22:22:00 +01:00
47b6000c36 wmake/rules/General: Add support for WM_SCHEDULER to the compilation of lex, yacc and moc files 2016-07-03 22:21:02 +01:00
af6e8f150c timeVaryingMappedFixedValue: update for SP 2016-07-01 17:42:35 +01:00
6703d49f94 etc/config.sh/CGAL: unset CGAL_ARCH_PATH if it is no longer needed 2016-07-01 17:01:26 +01:00
9c0a04d8be BUG: need 'unset -f' to unset functions (issue #170)
- triggered by dash.
2016-07-01 17:55:03 +02:00
579f559aa7 Correct handling of the CGAL version variable for makeCGAL in ThirdParty 2016-07-01 16:22:28 +01:00
f768402255 Simplified the handling of the CGAL installation 2016-07-01 14:53:28 +01:00
ed014a099c src/OpenFOAM/primitives/ints: Further tweaks
Resolved additional bug-report http://bugs.openfoam.org/view.php?id=2137
2016-07-01 14:52:54 +01:00
139faa3cf0 vtkUnstructuredReader: corrected prism point ordering
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=1885
2016-07-01 14:45:18 +01:00
a623ab42a3 timeVaryingMappedFixedValue: Reinstated support for AverageField 2016-07-01 10:26:20 +01:00
08e941dccb Updated header 2016-07-01 10:25:38 +01:00
fa11efeba6 src/OpenFOAM/primitives/ints: Corrected MIN and MAX for uints
Resolves bug-report http://bugs.openfoam.org/view.php?id=2137
2016-07-01 10:24:42 +01:00
9965c5006c STYLE: minor improvement when writing list entry 2016-07-01 09:55:51 +02:00
ce121c92dc STYLE: minor simplification of check for uniform contents 2016-07-01 09:09:50 +02:00
cae7ce37f5 ENH: provide formatting version of Foam::name() (issue #253)
- there are some cases in which the C-style sprintf is much more
  convenient, albeit problematic for buffer overwrites.

  Provide a formatting version of Foam::name() for language
  primitives that is buffer-safe.

  Returns a Foam::word, so that further output will be unquoted, but
  without any checking that the characters are indeed entirely valid
  word characters.

  Example use,
      i = 1234;
      s = Foam::name("%08d", i);
      produces '00001234'

  Alternative using string streams:

      std::ostringstream buf;
      buf.fill('0');
      buf << setw(8) << i;
      s = buf.str();

  Note that the format specification can also be slightly more complex:

     Foam::name("output%08d.vtk", i);
     Foam::name("timing=%.2fs", time);

It remains the caller's responsibility to ensure that the format mask
is valid.
2016-07-01 08:23:13 +02:00
7bc05996ba SloanRenumber: link with libboost_system.so rather than libboost_thread.so
Resolves bug-report http://bugs.openfoam.org/view.php?id=2135
2016-06-30 12:01:32 +01:00
9fdb5506f4 timeVaryingMappedFixedValueFvPatchField: Simplifed for consistency with the output of sampledPlane
Now a case can be sampled and written in 'foam' format and used for the
timeVaryingMappedFixedValue BC of another case.
2016-06-30 10:35:01 +01:00
507b8988ec functionObjects::surfaceRegion: Write the surface geometry for formats in which the data is in separate files 2016-06-30 10:33:55 +01:00
c224d19c83 sampledCuttingPlane: Rationalized 2016-06-30 10:33:28 +01:00
939376a844 src/sampling/Make/files: Updated 2016-06-30 10:33:07 +01:00
c6200ea25e sampledPlane, plane: standardize the selection of the plane type 2016-06-30 10:32:31 +01:00
fdb4f37148 foamFileSurfaceWriter -> foamSurfaceWriter for consistency with the naming of the other writers 2016-06-30 10:31:09 +01:00
287b6537f2 fvcD2dt2: Updated non-const dereferencing to use '.ref()'
Resolves bug-report http://bugs.openfoam.org/view.php?id=2133
2016-06-29 21:55:57 +01:00
6d330d3d12 tutorials: Updated formatting of dictionaries and specification of 'plane' and 'samplePlane' 2016-06-29 18:02:57 +01:00
a158c30710 plane, sampledPlane: Rationalize the naming convention for the defining normal and point
normalVector -> normal
basePoint -> point

The old names are supported for backward-compatibility.
2016-06-29 16:58:35 +01:00
3e3a183732 Completed transformation of post-processing utilities into functionObjects 2016-06-28 19:26:23 +01:00
1bef3ab2e6 functionObjects::fieldExpression: Standardized warning message 2016-06-28 13:52:10 +01:00
9c37e165f7 utilities particleTracks, steadyParticleTracks: Updated and corrected 2016-06-27 20:44:11 +01:00
1ab64a0dd9 rigidBodyMeshMotion: Check for attempted assignment of patches to a merged body 2016-06-27 16:31:51 +01:00
850013e732 functionObjects::XiReactionRate: Writes the turbulent flame-speed and reaction-rate volScalarFields for the Xi-based combustion models
Replaces the obsolete and 'wdot' utility.
2016-06-27 08:58:36 +01:00
28f049e9b9 writeCellCentres utility: Replaced by writeCellCentres functionObject
postProcess -func writeCellCentres
2016-06-27 07:51:19 +01:00
4e09a6e598 foamGraph.*: Simplified scripts
Added a 'deprecated' comment and recommendation to use 'foamLog'
2016-06-25 22:14:25 +01:00
6bf368c925 bin/foamGraph.*: Converted to POSIX shell 2016-06-24 22:32:50 +01:00
6a2a5cbd24 foamListSourceFiles: keep .orig files 2016-06-24 22:32:22 +01:00
c28a45a8c5 Corrected file permissions 2016-06-24 22:32:08 +01:00
dea6a3c6e8 wmake/Allwmake: Completed support for targetType 'objects'
Patch contributed by Mattijs Janssens
2016-06-24 15:25:11 +01:00
186b2c1c69 potentialFoam: simplify the Phi BCs to use only fixedValue and zeroGradient by default
Resolves bug-report http://bugs.openfoam.org/view.php?id=2129
2016-06-24 15:16:51 +01:00
09819c52e0 tutorials/lagrangian/simpleReactingParcelFoam/verticalChannel: Updated entrainment BC 2016-06-24 14:06:30 +01:00
a1b524f8bc etc/config.sh/aliases: For backward-compatibility unalias wmRefresh if it is defined as an alias 2016-06-24 10:36:04 +01:00
6b6a73d9b2 applications/utilities/mesh/generation/Allwmake: Build foamyHexMesh if FOAMY_HEX_MESH is set 2016-06-24 08:48:29 +01:00
56985cdae8 Doxygen: Updated header 2016-06-23 16:06:12 +01:00
bd64b4059f CGAL: Set to use the system CGAL installation by default 2016-06-23 16:05:44 +01:00
d8fcf89570 Doxygen: Cleanup 'dot' files 2016-06-23 16:05:19 +01:00
e680a2716b Updated header 2016-06-23 16:05:11 +01:00
f7801bd815 Corrected file permissions 2016-06-23 16:05:02 +01:00
ab0b5545b4 etc/config.[c]sh: update wmRefresh to call wmUnset before updating the environment 2016-06-21 19:48:19 +01:00
96a038f281 foamyMesh: Simplify support for system CGAL installation 2016-06-21 19:47:46 +01:00
b646237d1d Corrected headers 2016-06-21 16:17:37 +01:00
a2f3512421 etc/caseDicts: Removed trailing whitespace 2016-06-21 16:13:22 +01:00
0aa05185db mapFieldsPar: updated to enable mapping from source patches (instead of recreating)
- patchFields now get mapped (instead of created)
  - with -consistent it now maps all patches except for processor ones (they are
    the only ones that are processor-local)
  - all constraint patches get evaluated after mapping to bring them up to date.

Patch contributed by Mattijs Janssens
2016-06-21 14:16:18 +01:00
e6f4d41228 uLabel: Removed unnecessary checks for < 0
Resolves bug-report http://bugs.openfoam.org/view.php?id=2128
2016-06-21 11:05:04 +01:00
04e56bfa6d doc/Doxygen/customdoxygen.css: simplified 2016-06-21 11:04:50 +01:00
7200384f18 Corrected documentation for Doxygen 2016-06-21 11:04:34 +01:00
3990302a54 Updated and simplified the Doxygen documentation 2016-06-20 21:20:28 +01:00
7ecb1422ce wclean all: if an Allclean script exists in sub-directories execute otherwise execute wclean
Resolves bug-report http://bugs.openfoam.org/view.php?id=2125
2016-06-20 10:05:23 +01:00
d04ea965e2 Update headers 2016-06-20 09:39:47 +01:00
b16756115a Remove/replace deprecated functions and classes 2016-06-20 09:39:02 +01:00
71fdcab771 Updated header documentation processed by Doxygen 2016-06-19 21:23:54 +01:00
0c62c8e1d0 fvPatchFields/derived/flowRateInletVelocity: Write the extrapolateProfile switch 2016-06-17 20:27:31 +01:00
6baef83eca ODESolvers::seulex: Handle possible overflow in the calculation of the dy norm 2016-06-17 18:59:28 +01:00
3f169f9045 bin/tools/doxyFilter.sed: Corrected 2016-06-17 18:59:09 +01:00
6a53ed41ba Doxygen documentation: Standardized the 'See also' heading 2016-06-17 17:31:34 +01:00
b3f3562d3c Doxygen documentation: Use the standard 'Usage' rather than the '\heading....' 2016-06-17 17:22:24 +01:00
a7ecd24a7c Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-17 17:14:30 +01:00
de4c018b19 Doxygen documentation: Remove superfluous linebreak 2016-06-17 17:13:39 +01:00
20ad00fc5d foamSearch: new script that searches a directory for
dictionary files of a particular name and extracts entries of a
particular keyword, sorting results into a unique list.

For example,
    foamSearch $FOAM_TUTORIALS laplacianSchemes.default fvSchemes

produces...
    default         Gauss linear corrected;
    default         Gauss linear limited corrected 0.33;
    default         Gauss linear limited corrected 0.5;
    default         Gauss linear orthogonal;
    default         Gauss linear uncorrected;
    default         none;

Uses the fantastic foamDictionary utility.
2016-06-17 14:53:13 +01:00
6891950288 singleGraph post-processing: added example configuration comments 2016-06-17 12:31:43 +01:00
4807448bb1 cyclicACMIPolyPatch: Clear geometry when resetting
Patch contributed by Mattijs Janssens
2016-06-17 11:50:56 +01:00
0d7bf4ffe1 cyclicACMIFvPatchField: Corrected declaration of updateCoeffs to be virtual 2016-06-17 11:50:30 +01:00
0f13f839a4 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-17 09:12:32 +01:00
1319df48d9 Rationalized Doxygen documentation of command-line options 2016-06-17 09:11:58 +01:00
aa12a81474 pitzDaily tutorial: replaced streamline function object
with new #includeFunc directive
2016-06-17 08:18:41 +01:00
b33932e1f6 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-17 07:38:14 +01:00
2e206db93c foamList: Remove dependency on utility libraries 2016-06-17 07:37:43 +01:00
1024bec26a sample function: add overrides comment and example 2016-06-16 22:51:22 +01:00
9cfccd2093 Simplify and correct Doxygen lists using '-' rather than '\li \c' 2016-06-16 20:10:39 +01:00
c2dcd18887 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-16 15:32:43 +01:00
c9adfb9806 fvOptions/constraints/fixedValueConstraint: Replacement for the nonsensical ExplicitSetValue
Description
    Constrain the field values within a specified region.

    For example to set the turbulence properties within a porous region:
    \verbatim
    porosityTurbulence
    {
        type            scalarFixedValueConstraint;
        active          yes;

        scalarFixedValueConstraintCoeffs
        {
            selectionMode   cellZone;
            cellZone        porosity;
            fieldValues
            {
                k           30.7;
                epsilon     1.5;
            }
        }
    }
    \endverbatim

See tutorials/compressible/rhoSimpleFoam/angledDuctExplicitFixedCoeff
constant/fvOptions for an example of this fvOption in action.
2016-06-16 15:32:19 +01:00
ce11c8288d foamMonitor: fixed bug in test syntax 2016-06-16 15:04:12 +01:00
fb5358eed0 Packaged function objects: reformatted units in Descriptions 2016-06-16 13:04:13 +01:00
787122c9c8 functionObjectList::list: Support recursion when listing functionObject configuration files 2016-06-16 13:02:17 +01:00
64aa9925e4 totalPressureFvPatchScalarField, uniformTotalPressureFvPatchScalarField: simplified and rationalized
The modes of operation are set by the dimensions of the pressure field
    to which this boundary condition is applied, the \c psi entry and the value
    of \c gamma:
    \table
        Mode                    | dimensions | psi   | gamma
        incompressible subsonic | p/rho      |       |
        compressible subsonic   | p          | none  |
        compressible transonic  | p          | psi   | 1
        compressible supersonic | p          | psi   | > 1
    \endtable

    For most applications the totalPressure boundary condition now only
    requires p0 to be specified e.g.
    outlet
    {
        type            totalPressure;
        p0              uniform 1e5;
    }
2016-06-16 12:21:34 +01:00
e71b8cabd8 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-16 08:10:15 +01:00
31e09c82da foamList: Avoid linking optional libraries 2016-06-16 08:09:49 +01:00
42b2086683 ENH: adapter for a list of C++ strings <-> a list of C-style strings
- Translate a list of C++ strings into C-style (argc, argv) pair.
- Translate C-style (argc, argv) pair to list of C++ strings.

Useful when interfacing to external C-code and some libraries
2016-06-16 08:22:53 +02:00
4ae45d9499 Template cases: commenting out scalarLevels to prevent 0 directory
being filled with cellLevel files, which generally breaks workflows
2016-06-15 18:06:12 +01:00
6aa7f10323 Template cases: removed solver entries using default values from fvSolution 2016-06-15 16:28:42 +01:00
cbbb8bbdad foamList: Complete set of included libraries 2016-06-15 14:23:14 +01:00
b2223913d0 wmake/scripts/wmakeFunctions: Add support for $WM_PROJECT_DIR being a link 2016-06-15 14:22:33 +01:00
b5d7ba3190 fvPatchField, cyclicACMI: Renamed weighted updateCoeffs
updateCoeffs(const scalarField&) -> updateWeightedCoeffs(const scalarField&)

to avoid confusion with other specialized forms of updateCoeffs.

Patch contributed by Mattijs Janssens
2016-06-15 09:06:16 +01:00
175b27ff32 functionObjects::surfaceRegion,volRegion: Improved documentation 2016-06-15 09:05:35 +01:00
3d98d6e5c6 changeDictionary: Simplified by removing the need for the superfluous dictionaryReplacement sub-dictionary
Added the option '-subDict' to specify a sub-dictionary if multiple
replacement sets are present in the same file.  This also provides
backward compatibility by setting '-subDict dictionaryReplacement'
2016-06-15 09:03:05 +01:00
344f435f54 Tutorials fvSolution files: removed solver entries which use default
values; formatted Switch entries consistently across all cases
2016-06-15 07:39:12 +01:00
dc305b04f3 foamList: Added support for listing scalar and vector field boundary conditions
Usage: foamList [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -compressibleTurbulenceModels
                    List compressible turbulenceModels
  -functionObjects  List functionObjects
  -fvOptions        List fvOptions
  -incompressibleTurbulenceModels
                    List incompressible turbulenceModels
  -noFunctionObjects
                    do not execute functionObjects
  -registeredSwitches
                    List switches registered for run-time modification
  -scalarBCs        List scalar field boundary conditions (fvPatchField<scalar>)
  -switches         List switches declared in libraries but not set in
                    etc/controlDict
  -unset            List switches declared in libraries but not set in
                    etc/controlDict
  -vectorBCs        List vector field boundary conditions (fvPatchField<vector>)
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage
2016-06-14 17:43:31 +01:00
fbc0d4f4f1 foamList: Added support for listing fvOptions, functionObjects and turbulence models
Usage: foamList [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -compressibleTurbulenceModels
                    List compressible turbulenceModels
  -functionObjects  List functionObjects
  -fvOptions        List fvOptions
  -incompressibleTurbulenceModels
                    List incompressible turbulenceModels
  -noFunctionObjects
                    do not execute functionObjects
  -registeredSwitches
                    List switches registered for run-time modification
  -switches         List switches declared in libraries but not set in
                    etc/controlDict
  -unset            List switches declared in libraries but not set in
                    etc/controlDict
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage
2016-06-14 16:45:27 +01:00
19eb6fbc6c Legacy solver wrappers ICCG and BICCG removed
Instead of ICCG use PCG with the DIC preconditioner
Instead of BICCG use PBiCG with the DILU preconditioner
2016-06-14 14:53:28 +01:00
377ea204ab Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-14 12:18:20 +01:00
6bade21b2a multiphaseCompressibleTurbulenceModels, twoPhaseCompressibleTurbulenceModels, phaseCompressibleTurbulenceModels: Added LIB_LIBS 2016-06-14 12:17:15 +01:00
876a610e47 src/Allwmake: Update the location of global.o
Resolves bug-report http://bugs.openfoam.org/view.php?id=2120
2016-06-14 12:15:07 +01:00
3d810c11dc Tutorials: made laplacianSchemes consistent and correct 2016-06-13 23:38:03 +01:00
15653daa35 etc/caseDicts/postProcessing: simplified configuration files 2016-06-13 17:03:06 +01:00
029825b83c applications/utilities: Reorganized 2016-06-13 17:02:43 +01:00
fdf69b3c25 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-13 16:42:51 +01:00
fda11f60b1 foamListTimes: moved to applications/utilities/miscellaneous/foamListTimes 2016-06-13 16:42:25 +01:00
dfd9d97646 Utility ptot has been superceded by the postProcess utility:
postProcess -func 'totalPressureIncompressible(U,p)'
or
    postProcess -func 'totalPressureCompressible(rho,U,p)'
2016-06-13 16:42:00 +01:00
4baac4cd80 sonicFoam cases: removed redundant coefficient in divSchemes 2016-06-13 15:03:57 +01:00
de02a089ba tutorials: Removed references to 'sampleDict' 2016-06-13 14:53:56 +01:00
0e4e28be26 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-13 14:29:38 +01:00
d9f423ec85 Utility sample: replaced by 'postProcess -func sample'
To re-use existing 'sampleDict' files simply add the following entries:

    type sets;
    libs ("libsampling.so");

and run

    postProcess -func sampleDict

It is probably better to also rename 'sampleDict' -> 'sample' and then run

    postProcess -func sampleDict
2016-06-13 14:27:46 +01:00
cc151ce9a0 pimpleDyMFoam/mixerVesselAMI2D: removed redundant coefficient 2016-06-13 13:12:24 +01:00
ffc5578812 probeLocations has been superceded by the postProcess utility
e.g.
postProcess -func probes

or

postProcess -func 'probes(p, U)'
2016-06-13 09:55:26 +01:00
ee42f980f6 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-13 09:47:53 +01:00
beb44f9bfa Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-13 09:43:18 +01:00
118a0f225d functionObjects: Completed transformation of 'source' to vol/surfaceRegion 2016-06-13 09:42:14 +01:00
12814a306d sonicFoam forwardStep tutorial: removed redundant scheme entry 2016-06-13 09:34:01 +01:00
ae1a6dd12d functionObjects: Simplified the handling of the post-processing mode
Replaced the 'postProcess' argument to the 'write' and 'execute'
functions with the single static member 'postProcess' in the
functionObject base-class.
2016-06-13 08:36:03 +01:00
18b632e71d Utilities patchAverage and patchIntegrate replaced by postProcess
e.g.
    postProcess -func 'patchAverage(name=inlet,p)'
    postProcess -func 'patchIntegrate(name=inlet,p)'
2016-06-12 22:32:15 +01:00
6656aff301 etc/caseDicts/postProcessing/flowRate: Corrected includes
Resolves bug-report http://bugs.openfoam.org/view.php?id=2117
2016-06-12 22:28:51 +01:00
6be269ca0b Minor reformatting 2016-06-12 21:12:13 +01:00
f885349921 Removed experimental code 2016-06-12 21:11:55 +01:00
83321bd4f7 functionObjects: renamed faceSource -> surfaceRegion, cellSource -> volRegion
The use of the term 'source' in the context of post-processing is
confusing and does not properly describe the process of region
selection.  The new names 'surfaceRegion' and 'volRegion' better
describe the purpose of the functionObjects which is to provide field
processing functionality limited to a specified region of space, either
a surface or volume.

The keyword 'source' is renamed 'regionType' which better describes the
purpose which is to specify the method by which the surface or volume
region is selected.

The keyword to select the name of the surface or volume region is
renamed from 'sourceName' to 'name' consistent with the other
name-changes above.
2016-06-12 20:56:51 +01:00
e2336fefd3 checkMesh: Added writing of faceSets and cellSets containing errors
In parallel the sets are reconstructed. e.g.

mpirun -np 6 checkMesh -parallel -allGeometry -allTopology -writeSets vtk

will create a postProcessing/ folder with the vtk files of the
(reconstructed) faceSets and cellSets.

Also improved analysis of disconnected regions now also checks for point
connectivity with is useful for detecting if AMI regions have duplicate
points.

Patch contributed by Mattijs Janssens
2016-06-12 20:51:07 +01:00
326b646bb8 Allwmake -update: Further improvements to handle source-tree/dep file inconsistencies after git pull
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2091
2016-06-11 16:28:40 +01:00
0365dec03e functionObjects: 'valueOutput' -> 'writeFields' 2016-06-11 15:26:10 +01:00
0f4df0150a functionObjects: 'valueOutput' -> 'writeFields' 2016-06-11 15:25:00 +01:00
55782e2868 foamList: Updated handling of switches and removed the '-redundant' option which does not work 2016-06-11 15:24:01 +01:00
2d91b2d92c Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-11 12:41:03 +01:00
ebac6c1512 pressureDifference packaged function object: corrected include statement 2016-06-11 12:40:59 +01:00
8cca43e259 applications/Allwmake: Compile utilities after solvers
Resolves bug-report http://bugs.openfoam.org/view.php?id=2116
2016-06-11 11:49:35 +01:00
1865b49aae Packaged function objects: added a Description entry 2016-06-11 08:53:04 +01:00
680b4e1f11 etc/config.[c]sh/unset: unalias wmRefresh
Resolves bug-report http://bugs.openfoam.org/view.php?id=2112
2016-06-10 22:19:21 +01:00
5b38cb4862 bin/tools/RunFunctions: Simplified using the foamDictionary -value option 2016-06-10 20:24:12 +01:00
29bff520a4 foamDictionary: Added -value option to print the value associated with an entry 2016-06-10 20:23:46 +01:00
2f84769710 bin/tools/RunFunctions: Updated to use foamDictionary 2016-06-10 18:02:26 +01:00
533135ebd4 foamDictionary: Added -expand and -includes options
Replaces expandDictionary utility
2016-06-10 17:39:16 +01:00
d42836f2ec wallFunctionTable: corrected source file name 2016-06-10 14:07:32 +01:00
f5ed8e777a autoRefineMesh: corrected source file and executable names 2016-06-10 14:05:30 +01:00
c8188265f1 foamDebugSwitches -> foamList -debug 2016-06-10 13:34:58 +01:00
603e34d514 UOPstream: corrected write(const char* str)
Resolved bug-report http://bugs.openfoam.org/view.php?id=2115
2016-06-10 13:33:40 +01:00
079a024374 functionObjects::fieldValue: Added support for 'field' entry
Added patchIntegrate configuration
2016-06-10 10:37:37 +01:00
0aa4d70b9d applications/utilities: FOAM_USER_APPBIN -> FOAM_APPBIN 2016-06-10 10:35:57 +01:00
829f97fb93 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-10 08:29:10 +01:00
4b5905e535 functionObjects::writeRegisteredObject -> functionObjects::writeObjects
Added configuration file etc/caseDicts/postProcessing/fields/writeObjects
2016-06-10 08:28:13 +01:00
288ead131d Descriptions of solvers corrected and made more consistent and more user-friendly 2016-06-09 18:59:40 +01:00
6d5db96ad9 ENH: subdict output with leading name (issue #255)
- Introduce dictionary::writeEntries for better code-reuse.

  Before
  ======
      os << nl << indent << "name";
      dict.write(os);

  After
  =====
      dict.write(os, "name");
2016-06-09 18:33:56 +01:00
792eaa3566 stressComponents: utility replaced by the 'R' and 'components' functionObject used with the '-postProcess' option 2016-06-09 18:09:27 +01:00
acdb7a0324 wallGradU: utility replaced by the 'grad' functionObject used with the '-postProcess' option 2016-06-09 18:06:39 +01:00
657c2909ed createTurbulenceFields: utility replaced by 'turbulenceFields' functionObject used with the '-postProcess' option 2016-06-09 17:17:19 +01:00
0f5b4f3c49 functionObjects: Corrected docs 2016-06-09 16:29:06 +01:00
6a03830b05 R: utility replaced by functionObject used with the '-postProcess' option 2016-06-09 16:28:30 +01:00
aeb667e1f4 STYLE/ENH: reduce code duplication for coded boundary conditions (issue #184)
- relocate common dictionary output into codedBase class
2016-06-09 16:13:04 +01:00
13f91bf5de functionObjects: 'output:' -> 'write:' for consistency with the naming of the 'write' function 2016-06-09 16:06:44 +01:00
fd734554b9 functionObjects::yPlus: Rationalized the functionality in 'execute' and 'write' 2016-06-09 16:06:09 +01:00
4734b1af5b wallShearStress: utility replaced by functionObject used with the '-postProcess' option 2016-06-09 16:05:13 +01:00
e175594e9f Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-09 14:52:04 +01:00
ca588fb2c5 Merge branch 'master' of github.com:OpenFOAM/OpenFOAM-dev 2016-06-09 14:36:16 +01:00
df904757b4 wmake/rules/General/CGAL: lib -> lib64 on 64bit OSs
Patch contributed by Bruno Santos
Resolves patch request http://bugs.openfoam.org/view.php?id=2114
2016-06-09 14:34:26 +01:00
02886159cb Update plateHole case to be consistent with User Guide tutorial 2016-06-08 15:34:16 +01:00
43b3fa2ce3 functionObjects::scalarTransport: simplified, standardized, rationalized
tutorials/incompressible/pisoFoam/les/pitzDaily: Added scalarTransport
functionObject to demonstrate the new functionality
2016-06-08 15:11:57 +01:00
421d3ffd5e Name of packaged function object consistent with filename
to enable the postProcess -func <function> option to work
2016-06-08 14:15:20 +01:00
ee6188ed09 Removed fixedWalls from cuttingPatches because it is redundant now fixedWalls is noSlip 2016-06-08 14:08:26 +01:00
c32f4fef00 Corrected RAS cavity case to be consistent with User Guide tutorial 2016-06-08 14:01:50 +01:00
70f3947c48 etc/bashrc,cshrc: Use "$WM_PROJECT" rather than "OpenFOAM" in the setting of $FOAM_INST_DIR
Patch contributed by Bruno Santos
Resolves patch request http://bugs.openfoam.org/view.php?id=2112
2016-06-08 11:51:21 +01:00
c93dcf98a6 applications/utilities/miscellaneous/foamDictionary/Make/options: Removed debug options 2016-06-07 16:27:22 +01:00
680c687407 src/rigidBodyMeshMotion/Make/options: Removed debug switches 2016-06-07 16:25:29 +01:00
6fe3812698 etc/config.*/aliases: Updated, removed duplicates and added foamVersion
foamVersion: prints the current OpenFOAM version
foamVersion <version>: changes to the specified version
2016-06-07 16:15:46 +01:00
c88070040e PatchFlowRateInjection: Corrected parallel handling of the random position
Resolves bug-report http://bugs.openfoam.org/view.php?id=2111
2016-06-07 10:56:33 +01:00
f2d9959bae foamConfigurePaths: Updated foamInstall option 2016-06-06 19:32:01 +01:00
2b71ea6f58 Update headers 2016-06-06 17:22:23 +01:00
b7243e2d19 etc/bashrc,cshrc: Simplify and automate the setting of FOAM_INST_DIR
FOAM_INST_DIR is the location of the OpenFOAM installation which defaults to
the directory containing the etc/bashrc,cshrc file.  If this default is
not appropriate FOAM_INST_DIR can be set explicitly.
2016-06-06 17:20:10 +01:00
048a3a7ada tutorials/lagrangian/MPPICFoam/injectionChannel: Corrected orientation of inlet air
Resolves bug-report http://bugs.openfoam.org/view.php?id=2110
2016-06-06 12:20:14 +01:00
06f22a9bf3 ENH: cleanup Ostream to ease usage (issue #254)
- Include newline in beginBlock/endBlock, since this corresponds to
  the standard usage. The beginBlock now takes keyType instead of word.

- Provide Ostream::writeEntry method to reduce clutter and simplify
  writing of entries.

  Before
  ======
      os << indent << "name" << nl
         << indent << token::BEGIN_BLOCK << incrIndent << nl;
      os.writeKeyword("key1") << val1 << token::END_STATEMENT << nl;
      os.writeKeyword("key2") << val2 << token::END_STATEMENT << nl;
      os << decrIndent << indent << token::END_BLOCK << nl;

  After
  =====
      os.beginBlock("name");
      os.writeEntry("key1", val1);
      os.writeEntry("key2", val2);
      os.endBlock();

- For completeness, support inline use of various Ostream methods.
  For example,

      os << beginBlock;
      os.writeEntry("key1", val1);
      os.writeEntry("key2", val2);
      os << endBlock;

- For those who wish to write in long form, can also use endEntry inline:

      os.beginBlock("name");
      os.writeKeyword("key1") << val2 << endEntry;
      os.writeKeyword("key2") << val2 << endEntry;
      os.endBlock();

The endEntry encapsulates a semi-colon, newline combination.
2016-06-06 11:51:05 +01:00
34e48fff4c kOmegaSSTDES: New DES model based on the k-omega SST RAS model
Description
    Implementation of the k-omega-SST-DES turbulence model for
    incompressible and compressible flows.

    DES model described in:
    \verbatim
        Menter, F. R., Kuntz, M., and Langtry, R. (2003).
        Ten Years of Industrial Experience with the SST Turbulence Model.
        Turbulence, Heat and Mass Transfer 4, ed: K. Hanjalic, Y. Nagano,
        & M. Tummers, Begell House, Inc., 625 - 632.
    \endverbatim

    Optional support for zonal filtering based on F1 or F2 is provided as
    described in the paper.

    For further details of the implementation of the base k-omega-SST model
    see Foam::kOmegaSST.

    The DES coefficient 'CDES' defaults to 0.61 but may be changed as
    necessary.

    The zonal filter filter defaults to '2' which uses "(1 - F2)" as
    suggested in the paper but '0' (no filtering) and '1' which uses
    "(1 - F1)" are also supported.
2016-06-06 08:56:54 +01:00
b625d2ba8e etc/config.*/unset: Added CGAL-related environment variables 2016-06-05 18:22:28 +01:00
a3a04ceae9 ORourkeCollision: Cache access to the UList of parcel pointers for cell 2016-06-04 18:49:10 +01:00
d60ae9a496 ORourkeCollision: use a CompactListList to avoid memory allocation overhead 2016-06-04 17:45:35 +01:00
76f6236bbe DynamicList: minor cleanup 2016-06-04 17:45:11 +01:00
315ce79660 ORourkeCollision: Corrected bugs and added more efficient collision detection
See http://bugs.openfoam.org/view.php?id=2097
2016-06-04 11:48:27 +01:00
2443ed0a70 wmake/rules/linux64GccKNL: Optimized compilation options for the Knights Landing MIC processor 2016-06-04 10:13:22 +01:00
d984a96645 foamDictionary: New utility to print and manipulate dictionary entries
Replaces the dictionary access functionality of foamInfoExec and
provides additional options to edit individual entries.
Contributed by Mattijs Janssens
2016-06-03 19:24:05 +01:00
dd281330bc foamInfoExec: Time listing functionality superseded by foamListTimes 2016-06-03 19:23:27 +01:00
82236c2b81 wmake/rules/linux64KNLIcc: Optimized compilation options the for Knights Landing MIC processor
Patch contributed by Paul Edwards, Intel
2016-06-03 15:29:14 +01:00
526ecfecf4 ENH: group info about particle output with "{}" etc
- The only reasonable means of mirroring the data layout.

  The '{}' delimiters mark the extent of the binary writes.

  The primitives 'label' and 'scalar' are directly supported and correspond
  to known byte widths.

  Using "List<scalar>" was a bad choice, since this triggers unpleasant
  tokenizing behaviour. Instead use 'scalars' as a provisional placeholder
  to indicates a list of scalar values. However, there is currently no
  support for actually handling lists of scalars, for several reasons:

   * The information is not available at compile-time.
     The cloud or parcel must be queried. And it must be guaranteed
     that this value is consistent for the entire cloud.

   * Binary output of lists is currently not great for determining the
     the encoded width:
        - A zero-size list is a single '0'.
        - The leading size is a non-constant number of digits.
        - There are prefix/suffix newlines need to be tagged and
          skipped.

  The special '*' (glob) token indicates that the remaining content
  has a dynamic variable length and nothing reasonable can be known
  about their sizes. This is exemplified by the collision records.
2016-06-02 17:39:19 +02:00
2b5e73fbce BUG: incorrect face order/orientation in boundBox (issue #196)
- was fortunately not used anywhere previously
2016-07-28 07:00:33 +02:00
79088bb611 functionObjects/forces: The 'rhoInf' entry is now only required if 'rho' is set to 'rhoInf' 2016-06-02 15:14:14 +01:00
90eda1279e Minor reformatting 2016-06-02 15:14:01 +01:00
2cdebff3b7 LESfilters: Ensure the coupled BCs of the field are updated before filtering
Resolves bug-report http://bugs.openfoam.org/view.php?id=2108
2016-06-02 12:14:51 +01:00
723b92ddc1 etc/caseDicts/postProcessing: Updated now that #includeFunc handles function arguments 2016-06-01 21:52:07 +01:00
6000ea217f postProcess: Added '-list' option to list the available configured functionObjects 2016-06-01 16:28:07 +01:00
c7048a7b93 SprayParcel: Set the 'origId' of the child parcels
Resolves bug-report http://bugs.openfoam.org/view.php?id=2105
2016-05-31 21:25:09 +01:00
72db301f54 tutorials/multiphase/reactingTwoPhaseEulerFoam/laminar/bubbleColumnEvaporating: Minor cleanup 2016-05-31 21:22:13 +01:00
ea6d010f51 tutorials/incompressible/pimpleDyMFoam/propeller: Use the standard 'Q' functionObject configuration 2016-05-31 21:21:41 +01:00
1be464d23d functionObjectList::readFunctionObject: Add support for functionObject arguments containing '()'s 2016-05-31 17:47:21 +01:00
c022a97ff4 HashTable: Correct error messages
Resolves bug-report http://bugs.openfoam.org/view.php?id=2106
2016-05-31 17:18:23 +01:00
a9492b074f Updated headers 2016-05-31 17:18:14 +01:00
7c45066996 includeEntry, includeEtcEntry, includeIfPresentEntry: report -> log
for consistency with the 'Log' macro.
2016-05-31 17:17:24 +01:00
7454518bc5 includeFuncEntry: Added support for function arguments compatible with the '-func' post-processing option
e.g.

functions
{
    #includeFunc mag(U)
}

executes 'mag' on the field 'U' writing the field 'mag(U)'.

The equivalent post-processing command is

postProcess -func 'mag(U)'
2016-05-31 14:43:44 +01:00
cb1523dbd9 tutorials/compressible/sonicFoam/laminar/shockTube: Added functionObject
tutorials/electromagnetics/mhdFoam/hartmann: Added functionObject

Replaced separate 'postProcess' step with a functionObject executed at
run-time.
2016-05-31 10:33:48 +01:00
c4eedd4762 etc/config.*/paraview: Upgraded to ParaView-5.0.1 2016-05-30 21:27:11 +01:00
1be96a546c Added forward declaration of friend functions 2016-05-30 13:21:29 +01:00
fef82f935c Updated header 2016-05-30 08:31:21 +01:00
d438da1eb7 ACMI: Corrected conservation issue
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2057
2016-05-30 08:29:11 +01:00
3f608e95e6 Added forward declaration of friend functions 2016-05-30 08:28:35 +01:00
35dba48db1 createBaffles: filter zero-sized patches
Resolves patch request http://bugs.openfoam.org/view.php?id=2103
Patch contributed by Mattijs Janssens
2016-05-29 22:51:15 +01:00
a4f8f589de Added forward declaration of friend functions 2016-05-29 22:28:37 +01:00
227811bb2e etc/config.*: Added support for gcc-6.1 2016-05-29 22:28:07 +01:00
482869eea4 CGAL: Upgraded to 4.8 2016-05-29 22:27:46 +01:00
8ab6b4df2c buoyantBoussinesqPimpleFoam: Corrected handling of time-step adjustment
Resolves bug-report http://bugs.openfoam.org/view.php?id=2104
2016-05-29 22:26:53 +01:00
e4dc50dcb0 postProcessing: Replaced 'foamCalc' and the 'postCalc' utilities
with the more general and flexible 'postProcess' utility and '-postProcess' solver option

Rationale
---------

Both the 'postProcess' utility and '-postProcess' solver option use the
same extensive set of functionObjects available for data-processing
during the run avoiding the substantial code duplication necessary for
the 'foamCalc' and 'postCalc' utilities and simplifying maintenance.
Additionally consistency is guaranteed between solver data processing
and post-processing.

The functionObjects have been substantially re-written and generalized
to simplify development and encourage contribution.

Configuration
-------------

An extensive set of simple functionObject configuration files are
provided in

OpenFOAM-dev/etc/caseDicts/postProcessing

and more will be added in the future.  These can either be copied into
'<case>/system' directory and included into the 'controlDict.functions'
sub-dictionary or included directly from 'etc/caseDicts/postProcessing'
using the '#includeEtc' directive or the new and more convenient
'#includeFunc' directive which searches the
'<etc>/caseDicts/postProcessing' directories for the selected
functionObject, e.g.

functions
{
    #includeFunc Q
    #includeFunc Lambda2
}

'#includeFunc' first searches the '<case>/system' directory in case
there is a local configuration.

Description of #includeFunc
---------------------------

    Specify a functionObject dictionary file to include, expects the
    functionObject name to follow (without quotes).

    Search for functionObject dictionary file in
    user/group/shipped directories.
    The search scheme allows for version-specific and
    version-independent files using the following hierarchy:
    - \b user settings:
      - ~/.OpenFOAM/\<VERSION\>/caseDicts/postProcessing
      - ~/.OpenFOAM/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is set):
      - $WM_PROJECT_SITE/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_SITE/caseDicts/postProcessing
    - \b group (site) settings (when $WM_PROJECT_SITE is not set):
      - $WM_PROJECT_INST_DIR/site/\<VERSION\>/caseDicts/postProcessing
      - $WM_PROJECT_INST_DIR/site/caseDicts/postProcessing
    - \b other (shipped) settings:
      - $WM_PROJECT_DIR/etc/caseDicts/postProcessing

    An example of the \c \#includeFunc directive:
    \verbatim
        #includeFunc <funcName>
    \endverbatim

postProcess
-----------

The 'postProcess' utility and '-postProcess' solver option provide the
same set of controls to execute functionObjects after the run either by
reading a specified set of fields to process in the case of
'postProcess' or by reading all fields and models required to start the
run in the case of '-postProcess' for each selected time:

postProcess -help

Usage: postProcess [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

 pimpleFoam -postProcess -help

Usage: pimpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -field <name>     specify the name of the field to be processed, e.g. U
  -fields <list>    specify a list of fields to be processed, e.g. '(U T p)' -
                    regular expressions not currently supported
  -func <name>      specify the name of the functionObject to execute, e.g. Q
  -funcs <list>     specify the names of the functionObjects to execute, e.g.
                    '(Q div(U))'
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

The functionObjects to execute may be specified on the command-line
using the '-func' option for a single functionObject or '-funcs' for a
list, e.g.

postProcess -func Q
postProcess -funcs '(div(U) div(phi))'

In the case of 'Q' the default field to process is 'U' which is
specified in and read from the configuration file but this may be
overridden thus:

postProcess -func 'Q(Ua)'

as is done in the example above to calculate the two forms of the divergence of
the velocity field.  Additional fields which the functionObjects may depend on
can be specified using the '-field' or '-fields' options.

The 'postProcess' utility can only be used to execute functionObjects which
process fields present in the time directories.  However, functionObjects which
depend on fields obtained from models, e.g. properties derived from turbulence
models can be executed using the '-postProcess' of the appropriate solver, e.g.

pisoFoam -postProcess -func PecletNo

or

sonicFoam -postProcess -func MachNo

In this case all required fields will have already been read so the '-field' or
'-fields' options are not be needed.

Henry G. Weller
CFD Direct Ltd.
2016-05-28 18:58:48 +01:00
6f9573bb12 etcFiles: Added functions to find directories in the 'etc' directories
'findEtcFiles' moved from OSspecific to 'etcFiles' as it is not OS-specific
2016-05-28 18:55:37 +01:00
c242c1762a ReadFields: Added functions to read selected fields and store in the objectRegistry 2016-05-26 22:59:08 +01:00
f7e6e7d9a4 functionObjects::blendingFactor: Minor reformat 2016-05-26 22:58:46 +01:00
af39491c04 fileName: Added recursive directory search function
//- Recursively search the given directory for the file
    //  returning the path relative to the directory or
    //  fileName::null if not found
    fileName search(const word& file, const fileName& directory);
2016-05-26 21:43:16 +01:00
ecb05dd66b SafeFatalIOError: Updated to print correct file and line number
Resolves bug-report http://bugs.openfoam.org/view.php?id=2102
Patch contributed by Mattijs Janssens
2016-05-26 17:40:37 +01:00
fd24c05cf9 etc/caseDicts/postProcessing: Updated for recent developments in functionObjects 2016-05-26 16:31:32 +01:00
3186245b92 etc/caseDicts/postProcessing/fields: Added 'components' and 'div' 2016-05-26 15:34:15 +01:00
3b3d6809cf etc/caseDicts/postProcessing/fields/Q: Simplified 2016-05-26 15:34:01 +01:00
712fba33e3 functionObjects::Q: Result field named "Q" if the field is "U" otherwise "Q(<fieldName>)" 2016-05-26 15:32:31 +01:00
9d71c18fcf functionObjects::randomise: New functionObject to create a field with a random perturbation 2016-05-26 15:32:10 +01:00
1940cf8413 messageStream: Updated 'DebugVar' to handle multi-line object output
Resolves feature-request http://bugs.openfoam.org/view.php?id=2101
Patch contributed by Mattijs Janssens
2016-05-26 14:57:15 +01:00
d3994638b4 surfaceInterpolation:localMin,localMax: Add support for consistent interpolation on coupled BCs
Resolves bug-report http://bugs.openfoam.org/view.php?id=2100
2016-05-26 14:55:44 +01:00
4cf777fc3f functionObjects::magSqr, components: New functionObjects to calculate the 'magSqr' and 'components' of a field 2016-05-26 10:15:14 +01:00
e5d75e9824 regionFunctionObject: Indent 'write' messages 2016-05-26 10:14:51 +01:00
1b500ea18d functionObjects::fieldExpression: Corrected docs 2016-05-26 10:14:29 +01:00
693813aa90 functionObjects:🔍 Removed redundant warning 2016-05-26 10:14:07 +01:00
293267e924 functionObjects::blendingFactor: Removed redundant warning 2016-05-26 10:13:36 +01:00
ee462f8241 messageStream: Added 'Log' macro which outputs to 'Info' if 'log' is true
regionFunctionObject: moved 'log_' to public 'log' to support the 'Log' macro
2016-05-25 18:19:46 +01:00
82ca430a02 thermoSingleLayer: Provide better stabilization for the energy equation as delta -> 0 2016-05-25 18:12:07 +01:00
6463192261 simpleControl: Change the number of steps printed to be relative to the current time (for restarts) rather than 0
Resolves feature-request http://bugs.openfoam.org/view.php?id=2096
2016-05-25 16:58:28 +01:00
1de91282cd regionFunctionObject: Moved the field/object maintenance functions from fvMeshFunctionObject into regionFunctionObject 2016-05-25 16:26:57 +01:00
0e3f655865 functionObjects: Clear the result field from the objectRegistry if the argument fields are not available
This is needed to handle the processing of many time directories, some
of which may have the required fields and some not.
2016-05-25 15:40:58 +01:00
bae742112f postProcess: catch missing field errors to process further time-directories 2016-05-25 15:39:37 +01:00
bc6485b8f4 codedFunctionObject: Updated documentation 2016-05-24 14:01:33 +01:00
cc84047797 functionObjects: Rationalize logging 2016-05-24 10:40:28 +01:00
6b80811b1f functionObjects::surfaceInterpolateFields: Derive from fvMeshFunctionObject 2016-05-24 10:40:02 +01:00
e72a50cf47 functionObjects::fieldAverage,turbulenceFields: derive from fvMeshFunctionObject 2016-05-24 09:57:41 +01:00
6ce303c79a functionObjects::regionFunctionObject: Added optional 'log' entry (defaults to true) 2016-05-24 09:03:41 +01:00
b634f5af08 functionObjects::MachNo: New functionObject to calculate the Mach number volScalarField
of a compressible single-phase flow

See tutorials/compressible/sonicFoam/laminar/forwardStep/system/controlDict
2016-05-23 21:45:41 +01:00
f67d8dd695 functionObjects::forces: Corrected lookup of fluidThermo 2016-05-23 21:45:07 +01:00
be2ceff465 etc/config.*/aliases: Renamed aliases to be less SHOUTY and confusing 2016-05-23 18:47:28 +01:00
aaa453d16e functionObjects::enstrophy: new functionObject to calculate the enstrophy of the velocity 2016-05-23 15:22:15 +01:00
3d0c94bd67 functionObjects::flowType: new functionObject which calculates and writes the flowType of velocity field
The flow type parameter is obtained according to the following equation:
    \verbatim
                 |D| - |Omega|
        lambda = -------------
                 |D| + |Omega|

        -1 = rotational flow
         0 = simple shear flow
         1 = planar extensional flow
    \endverbatim
2016-05-23 14:59:10 +01:00
63058198cf functionObjects: Corrected 'grp' entries for 'field' functionObjects 2016-05-23 14:56:06 +01:00
23e2d0bdff DimensionedScalarField, GeometricScalarField: Added more rigorous dimension-checking for 'pow' functions 2016-05-23 12:04:02 +01:00
2fd07c1252 functionObjects::pressure: Use the new 'tmp' 'move' constructor
to return unchanged 'tmp' arguments
2016-05-23 12:03:19 +01:00
3565b5491f tmp: Added 'move' constructor to simplify return of unchanged 'tmp' arguments. 2016-05-23 12:01:36 +01:00
0a43d60567 functionObjects::pressureTools: simplified, standardized, rationalized and renamed 'pressure' 2016-05-22 21:29:46 +01:00
e134af2a2d functionObjects::residuals: Minor reformatting 2016-05-22 21:29:22 +01:00
2dbd3efe12 functionObjects::writeDictionary: Write the dictionaries from the write function not execute 2016-05-22 21:28:46 +01:00
39e0368d6b functionObjects: Corrected member function documentation 2016-05-22 21:28:24 +01:00
8b3b04b2f0 tutorials/incompressible/pimpleDyMFoam/propeller/system/Q: Updated 2016-05-22 19:03:23 +01:00
dab1e106c4 functionObjects/field: link turbulenceModel 2016-05-22 19:02:59 +01:00
3ba11a6e3a functionObjects::yPlus: simplified, standardized, rationalized 2016-05-22 17:08:40 +01:00
eb79a51fa6 fvcCellReduce: Correct signature and implementation of 'cellReduce' of a 'tmp' field 2016-05-22 17:07:53 +01:00
3c44f08d52 functionObjects::blendingFactor: simplified, standardized, rationalized 2016-05-22 16:30:48 +01:00
15773bf1b7 fvMeshFunctionObject: Rename 'write' -> 'writeField' to avoid clash with base-class 2016-05-22 16:30:12 +01:00
d474c97ced transformGeometricField: Use '.ref()' to obtain non-const access to a temporary 2016-05-22 14:29:59 +01:00
7fb2739437 functionObjects: Standardized field template parameter names 2016-05-22 14:29:14 +01:00
28359c53ba functionObjects/field/fieldCoordinateSystemTransform: simplified, standardized, rationalized 2016-05-22 14:26:40 +01:00
43110ffd38 functionObjects::Peclet -> functionObjects::PecletNo for consistency with functionObjects::CourantNo 2016-05-22 11:18:16 +01:00
8f68a493e8 functionObjects: Cleanup, reorganize and simplify 2016-05-21 23:12:12 +01:00
8e04042137 tmp: Allow '.ref()' for const 'tmp'
const-ness of the stored object is checked at run-time.
2016-05-21 23:10:58 +01:00
f73a8e6160 functionObjectList: Filter unnecessary warning from new 'libs' entry 2016-05-21 23:10:06 +01:00
3eec5854be Standardized the selection of required and optional fields in BCs, fvOptions, functionObjects etc.
In most boundary conditions, fvOptions etc. required and optional fields
to be looked-up from the objectRegistry are selected by setting the
keyword corresponding to the standard field name in the BC etc. to the
appropriate name in the objectRegistry.  Usually a default is provided
with sets the field name to the keyword name, e.g. in the
totalPressureFvPatchScalarField the velocity is selected by setting the
keyword 'U' to the appropriate name which defaults to 'U':

        Property     | Description             | Required    | Default value
        U            | velocity field name     | no          | U
        phi          | flux field name         | no          | phi
        .
        .
        .

However, in some BCs and functionObjects and many fvOptions another
convention is used in which the field name keyword is appended by 'Name'
e.g.

        Property     | Description             | Required    | Default value
        pName        | pressure field name     | no          | p
        UName        | velocity field name     | no          | U

This difference in convention is unnecessary and confusing, hinders code
and dictionary reuse and complicates code maintenance.  In this commit
the appended 'Name' is removed from the field selection keywords
standardizing OpenFOAM on the first convention above.
2016-05-21 20:28:20 +01:00
a84ffc3968 Updated header 2016-05-21 20:27:29 +01:00
29c985feec temperatureCoupledBase: Rationalized the selection of the method for obtaining the thermal conductivity
kappa -> kappaMethod
kappaName -> kappa
2016-05-21 20:26:23 +01:00
b00d967c8b Updated headers 2016-05-21 20:24:31 +01:00
f5ce43069d functionObjects, foamCalcFunctions, fvOptions: Standardized keywords for selecting fields and objects
Generally fields and objects are selected using the 'field[s]' and
'object[s]' keywords but this was not consistent between all
functionObject, fvOptions etc. and now fixed by applying the following
renaming:

fieldName -> field
fieldNames -> fields
objectName -> object
objectNames -> objects
2016-05-21 20:15:21 +01:00
546159a86c functionObjects: Simplified and reorganised using the fieldExpression base-class 2016-05-21 20:10:47 +01:00
3009367a88 fvMeshFunctionObject: Improved log output 2016-05-21 20:08:28 +01:00
447c850987 functionObjectList: Added support for 'libs' to load libraries for all functionObjects
e.g.

functions
{
    libs ("libfieldFunctionObjects.so");

    div
    {
        type            div;
        field           U;
        executeControl  writeTime;
        writeControl    writeTime;
    }

    Q
    {
        type            Q;
        executeControl  writeTime;
        writeControl    writeTime;
    }
}
2016-05-21 20:01:42 +01:00
af57fd2a3b wrmdep: Now prints the full path of the .dep files removed 2016-05-21 17:19:07 +01:00
16714f3569 functionObjects: New abstract base-class 'fieldExpression' for simple field expression evaluation functionObjects
Updated and simplified 'div', 'grad' and 'mag' functionObjects by deriving from 'fieldExpression'.
Corrected the handling of cached gradients in 'grad'.
2016-05-21 13:58:08 +01:00
6d562d1a5c codedBase.H: Minor reformat 2016-05-21 13:56:27 +01:00
1c48d056e6 tmp, autoPtr: Provide a typedef 'Type' to the stored type 2016-05-21 13:55:47 +01:00
03c497f6df Updated header 2016-05-19 09:40:29 +01:00
bf14e44bb3 Updated code comments 2016-05-19 09:40:17 +01:00
f2432865b5 Scalar: Documented 'posPart' and 'negPart' 2016-05-19 09:39:45 +01:00
83c7e97655 dynamicCode: Renamed 'redirectType' to 'name' to clarify the purpose
of the entry which is to provide the name of the generated class.

'redirectType' is supported for backward-compatibility.
2016-05-18 23:10:42 +01:00
7af20fd9db IOOutputFilter: Updated the signature of the 'write' function to correspond to the new functionObject 2016-05-18 23:09:26 +01:00
67de20df25 Further standardization of loop index naming: pointI -> pointi, patchI -> patchi 2016-05-18 21:20:42 +01:00
ac632e7984 functionObjects: minor reformatting of output 2016-05-18 13:37:08 +01:00
5af1a7e4f3 functionObjects::partialWrite: Redundant and removed
the equivalent functionality is provided by the writeRegisteredObject
   functionObject in a MUCH simpler, easier and extensible manner.

functionObject: Removed the now redundant 'timeSet' function.
2016-05-18 12:23:29 +01:00
354bc8bdcb dynamicCode: the "code" entry is now optional
codedFunctionObject: Added the "codeWrite" entry
    for the "write" function for consistency.
    The previous method of using the "code" entry for the "write"
    function was inconsistent and very confusing.
2016-05-18 12:20:03 +01:00
2b501b7e85 timeControlFunctionObject: Updated the control logic in the 'end' function
to correspond to the new default behavior of the 'end' function in
functionObject which now calls 'execute' then 'write'.
2016-05-18 09:05:24 +01:00
195b73e0f7 functionObject: Call 'execute' then 'write' from the default 'end' function. 2016-05-17 22:56:47 +01:00
76caf29e0b patchProbes: Corrected the signature of the write function 2016-05-17 21:49:17 +01:00
2ac07f386e patchProbes: Corrected the signature of the write function 2016-05-17 21:40:16 +01:00
f871f51970 Update loop index name probeI -> probei 2016-05-17 20:33:19 +01:00
3b63c760a9 writeRegisteredObject: Now writes the <time>/uniform/time dictionary 2016-05-17 12:36:49 +01:00
d6ce71f39a reconstructPar: Added '-noFields' option 2016-05-17 09:25:29 +01:00
cfb6d6c84e functionObjects/lagrangian/icoUncoupledKinematicCloud: Minor simplification of documentation 2016-05-17 09:24:58 +01:00
947fdf84af functionObjects::icoUncoupledKinematicCloud: tracks a uncoupled kinematic particle cloud
Description
    This Foam::functionObject tracks a uncoupled kinematic particle cloud in the
    specified velocity field of an incompressible flow (laminar, RANS or LES).

    It may be used in conjunction with any transient single-phase incompressible
    flow solver such as \c pisoFoam or \c pimpleFoam and tracks the particles or
    parcels without affecting the the flow-field.

    The \c kinematicCloud requires the the density of the fluid which is
    looked-up from \c constant/transportProperties dictionary and the
    acceleration due to gravity which is read from the \c constant/g file if
    present or defaults to zero.

    The \c kinematicCloud properties are read from the \c
    constant/kinematicCloudProperties dictionary in the usual manner.

    Example of function object specification:
    \verbatim
        tracks
        {
            libs ("liblagrangianFunctionObjects.so");
            type icoUncoupledKinematicCloud;
        }
    \endverbatim

    \heading Function object usage
    \table
        Property | Description                     | Required   | Default value
        type     | Type name: icoUncoupledKinematicCloud | yes  |
        U        | Name of the velocity field       | no        | U
        kinematicCloud | Name of the kinematicCloud | no        | kinematicCloud
    \endtable
2016-05-16 22:52:44 +01:00
fc0bdee154 dynamicCode/functionObjectTemplate: Updated and simplified by deriving from the regionFunctionObject base-class 2016-05-16 22:23:53 +01:00
1c992eba9c etc/codeTemplates/functionObject: Updated and simplified using fvMeshFunctionObject as the base-class 2016-05-16 22:16:22 +01:00
83bae2efd3 functionObjects: Renamed dictionary entry 'functionObjectLibs' -> 'libs'
This changes simplifies the specification of functionObjects in
controlDict and is consistent with the 'libs' option in controlDict to
load special solver libraries.

Support for the old 'functionObjectLibs' name is supported for backward compatibility.
2016-05-16 22:09:01 +01:00
a44857b4f2 functionObjects: Simply functionObjects requiring access to the fvMesh using fvMeshFunctionObject 2016-05-16 16:21:06 +01:00
e7fc198592 Allwmake: improved '-update' option to handle out-of-date '.dep' files
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2091
2016-05-16 12:21:57 +01:00
fd38002d57 functionObjects: Added regionFunctionObject and fvMeshFunctionObject intermediate base-classes
to simplify writing common functionObjects and avoid unnecessary code duplication
2016-05-16 12:20:44 +01:00
ee0aff67ce etc/codeTemplates/functionObject: Updated to correspond to the new functionObject structure 2016-05-15 21:47:18 +01:00
248ab45998 Updates to script documentation
Patch contributed by Bruno Santos
Resolves text report http://bugs.openfoam.org/view.php?id=2089
2016-05-15 18:12:26 +01:00
78d2971b21 functionObjects: rewritten to all be derived from 'functionObject'
- Avoids the need for the 'OutputFilterFunctionObject' wrapper
  - Time-control for execution and writing is now provided by the
    'timeControlFunctionObject' which instantiates the processing
    'functionObject' and controls its operation.
  - Alternative time-control functionObjects can now be written and
    selected at run-time without the need to compile wrapped version of
    EVERY existing functionObject which would have been required in the
    old structure.
  - The separation of 'execute' and 'write' functions is now formalized in the
    'functionObject' base-class and all derived classes implement the
    two functions.
  - Unnecessary implementations of functions with appropriate defaults
    in the 'functionObject' base-class have been removed reducing
    clutter and simplifying implementation of new functionObjects.
  - The 'coded' 'functionObject' has also been updated, simplified and tested.
  - Further simplification is now possible by creating some general
    intermediate classes derived from 'functionObject'.
2016-05-15 16:40:01 +01:00
ce0cd35185 Patches contributed by Mattijs Janssens:
splitMeshRegions: handle flipping of faces for surface fields

subsetMesh: subset dimensionedFields

decomposePar: use run-time selection of decomposition constraints. Used to
    keep cells on particular processors. See the decomposeParDict in

$FOAM_UTILITIES/parallel/decomposePar:
  - preserveBaffles: keep baffle faces on same processor
  - preserveFaceZones: keep faceZones owner and neighbour on same processor
  - preservePatches: keep owner and neighbour on same processor. Note: not
    suitable for cyclicAMI since these are not coupled on the patch level
  - singleProcessorFaceSets: keep complete faceSet on a single processor
  - refinementHistory: keep cells originating from a single cell on the
    same processor.

decomposePar: clean up decomposition of refinement data from snappyHexMesh

reconstructPar: reconstruct refinement data (refineHexMesh, snappyHexMesh)

reconstructParMesh: reconstruct refinement data (refineHexMesh, snappyHexMesh)

redistributePar:
  - corrected mapping surfaceFields
  - adding processor patches in order consistent with decomposePar

argList: check that slaves are running same version as master

fvMeshSubset: move to dynamicMesh library

fvMeshDistribute:
  - support for mapping dimensionedFields
  - corrected mapping of surfaceFields

parallel routines: allow parallel running on single processor

Field: support for
  - distributed mapping
  - mapping with flipping

mapDistribute: support for flipping

AMIInterpolation: avoid constructing localPoints
2016-05-15 16:36:48 +01:00
274d1df8a4 snappyHexMesh: Automatically remove zero-sized patches
All patches are preserved if the 'keepPatches' option is set true.
Patch contributed by Mattijs Janssens
2016-05-13 17:47:38 +01:00
bd52e35f77 checkMesh: Updated the closed-ness test for ACMI to use FV
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2088
2016-05-13 16:23:02 +01:00
ded5f35dd6 functionObjects: Separated 'execute' and 'write' functions to simplify support for post-processing 2016-05-13 09:05:29 +01:00
6164c2f262 Standardized the naming of functions which control the writing of fields etc.
to have the prefix 'write' rather than 'output'

So outputTime() -> writeTime()

but 'outputTime()' is still supported for backward-compatibility.

Also removed the redundant secondary-writing functionality from Time
which has been superseded by the 'writeRegisteredObject' functionObject.
2016-05-12 17:38:01 +01:00
c983670c91 functionObjects: Changed options 'outputControl' -> 'writeControl' and 'outputInterval' -> 'writeInterval'
for consistency with the time controls in controlDict and to avoid
unnecessary confusion.  All code and tutorials have been updated.

The old names 'outputControl' and 'outputInterval' are but supported for
backward compatibility but deprecated.
2016-05-12 11:38:11 +01:00
cacbc688d8 Doxygen documentation: Use C++-style comments for enumeration elements 2016-05-11 23:10:42 +01:00
84f6355ad0 OutputFilterFunctionObject: Removed support for "dictionary" option
Superseded by the more general #include dictionary directive.
2016-05-11 23:08:48 +01:00
acdfa68116 OutputFilterFunctionObject: Simplify construction 2016-05-11 14:40:55 +01:00
8152652476 etc/config.sh/metis: Added $WM_PRECISION_OPTION to support SP
etc/config.sh/scotch: Added $WM_PRECISION_OPTION for consistency
2016-05-11 14:39:28 +01:00
7389969e94 etc/config.*/settings: Remove unnecessary $WM_COMPILE_OPTION from $FOAM_EXT_LIBBIN
Simplified the directory structure in ThirdParty-dev/platforms
2016-05-11 14:37:07 +01:00
437030a57d functionObjects: Removed the redundant "viable" member function
Construction failure and recovery is not handled with exceptions in functionObjectList
2016-05-11 12:57:17 +01:00
82151962c5 functionObjects: Removed redundant "start()" member function 2016-05-11 10:20:39 +01:00
862d963a95 functionObjectList: Print the messages from errors caught during functionObject construction
Exit on FatalIOError
2016-05-11 10:19:07 +01:00
32dbb01e96 functionObjectList: Rationalized and simplified the handling of disabled functionObjects
Simplified and generalized the handling of functionObjects which fail to
construct by removing them from the list rather than maintaining an
"enabled" switch in each functionObject.
2016-05-11 09:03:52 +01:00
080908732d src/postProcessing/functionObjects: Removed unused IOOutputFilter clutter 2016-05-10 12:54:42 +01:00
1343b24611 etc/config.sh/metis: Updated for changes to ThirdParty-dev/Allwmake
See commit b627924a4bf104521b567d3aa3dc80c864325b1a

    Allwmake: Added scripted changes for REALTYPEWIDTH and IDXTYPEWIDTH
    Patch contributed by Bruno Santos
    Resolves bug-report http://bugs.openfoam.org/view.php?id=2085
2016-05-10 11:39:51 +01:00
1ab0875293 writeVTK: New functionObject to write fields is VTK format
Description
    This functionObject writes objects registered to the database in VTK format
    using the foamToVTK library.

    Currently only the writing of the cell-values of volFields is supported but
    support for other field types, patch fields, Lagrangian data etc. will be
    added.

    Example of function object specification:
    \verbatim
        writeVTK1
        {
            type        writeVTK;
            functionObjectLibs ("libIOFunctionObjects.so");
            ...
            objectNames (obj1 obj2);
        }
    \endverbatim

    \heading Function object usage
    \table
        Property     | Description             | Required    | Default value
        type         | type name: writeVTK     | yes         |
        objectNames  | objects to write        | yes         |
    \endtable
2016-05-10 10:06:19 +01:00
80a0b4a124 applications/solvers/heatTransfer/chtMultiRegionFoam: Check there are fluid meshes present for the '-postProcess' option 2016-05-09 19:55:11 +01:00
34811e43cd tutorials/incompressible/simpleFoam: Updated for changes in functionObjects 2016-05-09 19:12:38 +01:00
fe16f10f26 tutorials: "readFields" is no longer needed to post-process functionObjects
Use the solver '-postProcess' command-line option instead of execFlowFunctionObjects
2016-05-09 17:03:15 +01:00
5469e21fe2 execFlowFunctionObjects: Replaced with script providing instructions to use the '-postProcess' option 2016-05-09 17:02:00 +01:00
98f69d417f applications/solvers/heatTransfer: Added -postProcess option
See also commit cc455173ff
2016-05-09 16:28:48 +01:00
30a18e31ae applications/solvers: Moved createMRF.H into createField.H
to ensure MRF functionality is available for the -postProcess option
2016-05-09 16:06:12 +01:00
0dc0301da7 applications/solvers/lagrangian: Added -postProcess option
See also commit cc455173ff
2016-05-09 15:55:23 +01:00
0297dd9187 Updated headers 2016-05-09 15:23:36 +01:00
e450e8048b applications/solvers/discreteMethods: Added -postProcess option
See also commit cc455173ff
2016-05-09 15:23:07 +01:00
008086f64c applications/solvers/compressible: Added -postProcess option
See also commit cc455173ff
2016-05-09 15:16:22 +01:00
364044243a applications/solvers/combustion: Added -postProcess option
See also commit cc455173ff
2016-05-09 14:51:21 +01:00
7dca6b6a21 applications/solvers: Added -postProcess option
See also commit cc455173ff
2016-05-09 14:08:15 +01:00
6c275f2aa6 metisDecomp: Reverted 7cc9ba0a53 due to compilation error 2016-05-09 13:28:09 +01:00
7cc9ba0a53 metisDecomp: Use floatScalar rather than scalar for processorWeights
Resolved bug-report http://bugs.openfoam.org/view.php?id=2085
2016-05-09 08:42:52 +01:00
89159e7f39 applications/solvers/incompressible: Added -postProcess option
See also commit cc455173ff
2016-05-08 22:40:42 +01:00
38916e66bb applications/solvers/multiphase: Added -postProcess option
See also commit cc455173ff
2016-05-08 20:57:08 +01:00
7bbad53240 interPhaseChangeFoam, multiphaseInterFoam, potentialFreeSurfaceFoam: Added -postProcess option
See also commit cc455173ff
2016-05-08 17:23:36 +01:00
fce8d0310d interFoam: Added -postProcess option
See also commit cc455173ff
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1301
2016-05-08 14:32:23 +01:00
cc455173ff simpleFoam: Added experimental "-postProcess" option
Executes application functionObjects to post-process existing results.

    If the "dict" argument is specified the functionObjectList is constructed
    from that dictionary otherwise the functionObjectList is constructed from
    the "functions" sub-dictionary of "system/controlDict"

    Multiple time-steps may be processed and the standard utility time
    controls are provided.

This functionality is equivalent to execFlowFunctionObjects but in a
more efficient and general manner and will be included in all the
OpenFOAM solvers if it proves effective and maintainable.

The command-line options available with the "-postProcess" option may be
obtained by

simpleFoam -help -postProcess

Usage: simpleFoam [OPTIONS]
options:
  -case <dir>       specify alternate case directory, default is the cwd
  -constant         include the 'constant/' dir in the times list
  -dict <file>      read control dictionary from specified location
  -latestTime       select the latest time
  -newTimes         select the new times
  -noFunctionObjects
                    do not execute functionObjects
  -noZero           exclude the '0/' dir from the times list, has precedence
                    over the -withZero option
  -parallel         run in parallel
  -postProcess      Execute functionObjects only
  -region <name>    specify alternative mesh region
  -roots <(dir1 .. dirN)>
                    slave root directories for distributed running
  -time <ranges>    comma-separated time ranges - eg, ':10,20,40:70,1000:'
  -srcDoc           display source code in browser
  -doc              display application documentation in browser
  -help             print the usage

Henry G. Weller
CFD Direct Ltd.
2016-05-08 09:33:46 +01:00
224f014e96 tutorials: Removed unused "useReactionRate" option 2016-05-07 09:40:20 +01:00
8bc3d5e4fb functionObjects: Renamed option "adjustableTime" -> "adjustableRunTime" for consistency with Time 2016-05-07 09:32:00 +01:00
9461c7828f foamToVTK: Added Allwmake 2016-05-06 17:42:22 +01:00
0f17d95410 foamDebugSwitches: Updated for changes in functionObjects 2016-05-06 17:41:56 +01:00
14abfa742b primitives/direction: Changed from "char" to "int8_t" and added IO operators
to avoid problems when writing "nComponents"
2016-05-06 17:40:49 +01:00
a50015a423 foamToVTK: Use UPtrList rather than PtrList 2016-05-06 14:11:38 +01:00
6ba5b46d0f setConstraintTypes: Provide a "value" entry for ACMI
Patch contributed by Mattijs Janssens
Resolves bug-report http://bugs.openfoam.org/view.php?id=2083
2016-05-06 14:09:44 +01:00
81ba5b7757 PtrList: Now derived from UPtrList to avoid unnecessary code duplication
consistency with UList/List and so that functions which take a UPtrList
argument can also be called for PtrList.
2016-05-06 14:08:12 +01:00
f779557d38 etc/config.*/unset: Updated for changes in foamOldDirs
Patch contributed by Bruno Santos
Resolves bug-report http://bugs.openfoam.org/view.php?id=2031
2016-05-05 23:37:33 +01:00
763a3cecb8 etc/cshrc: Removed continuation lines from $foamOldDirs 2016-05-05 23:36:35 +01:00
ca3efa5776 etc/config.csh: Capitalized comments 2016-05-05 15:52:05 +01:00
ce81c49d2e etc/bashrc, etc/cshrc: Filter $WM_PROJECT_DIR from paths rather than $FOAM_INST_DIR
Additionally filter $ParaView_DIR from paths in config.sh/paraview and config.csh/paraview

Resolves bug-report http://bugs.openfoam.org/view.php?id=2031
2016-05-05 15:37:00 +01:00
cf4b35693c tutorials: Remove the unnecessary "\"s on "cp", "rm" and "mv"
Resolves bug-report http://bugs.openfoam.org/view.php?id=2077
2016-05-05 15:17:55 +01:00
637ee8830f processorPolyPatch: Avoid nesting loops with the same index 2016-05-05 15:17:08 +01:00
4281d14eb1 functionObjects: Updated documentation 2016-05-04 21:01:22 +01:00
566f2734b9 foamToVTK: Separated into the library libfoamToVTK and the utility foamToVTK 2016-05-04 15:16:33 +01:00
891b2a0f8b functionObjects: Moved functionObjects namespace documentation into functionObject.H 2016-05-04 13:56:36 +01:00
f6c670dcac functionObjects: Updated docs 2016-05-04 08:51:39 +01:00
ebafc87137 setTimeStepFunctionObject: Added functionObjects namespace 2016-05-03 23:39:14 +01:00
c70c12a2bb functionObjects: Simplified organization and naming 2016-05-03 23:37:28 +01:00
ff6d8914da functionObjects/jobControl/abortCalculation: Rename abortCalculation -> abort
functionObjects are now in the functionObjects namespace so "abort" no
longer causes a name-clash.
2016-05-03 20:01:19 +01:00
318123e7e4 Multiphase solvers: Update p_rgh following density changes 2016-05-03 15:51:15 +01:00
f7f1eea359 globalMeshData: Handle cyclic baffles in coupled edge synchronisation
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2080
Patch contributed by Mattijs Janssens
2016-05-03 15:49:52 +01:00
055b41e4da reactingTwoPhaseEulerFoam: Update p_rgh following density changes
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2073
2016-05-03 14:53:11 +01:00
698f135426 tutorials/multiphase/reactingTwoPhaseEulerFoam/RAS/wallBoiling/system/fvSolution: Updated to improve stability 2016-05-03 14:52:38 +01:00
bdf556e628 Building foamyHexMesh is now optional defaulting to not build
Set the environment variable "FOAMY_HEX_MESH" to build foamyHexMesh,
e.g. in ~/.OpenFOAM/dev/prefs.sh

FOAMY_HEX_MESH=yes
2016-05-02 18:21:45 +01:00
32762aa1f9 Change field loop index from "fieldI" to "fieldi" 2016-05-02 18:20:48 +01:00
0534a225fd functionObjects: Moved into the functionObjects namespace and rationalized and simplified failable construction
Rather than requiring each functionObject to handle failed construction
internally (using the active_ flag) the static member function "viable"
is provided which returns true if construction of the functionObject is
likely to be successful.  Failed construction is then handled by the
wrapper-class which constructs the functionObject,
e.g. "OutputFilterFunctionObject".
2016-05-02 16:28:24 +01:00
09262f5273 src/postProcessing/functionObjects: Moving the functionObjects into the "functionObjects" namespace 2016-05-01 14:48:30 +01:00
a3aa589263 EulerDdtScheme: evaluate dimensioned internal field expressions rather than primitive field expressions
Ensures dimension consistency and simplifies the expressions
2016-05-01 11:08:01 +01:00
4c5052a3a1 applications/solvers: include readTimeControls.H in the time-loop rather than createTimeControls.H
Patch contributed by Bruno Santos
Resolved bug-report http://www.openfoam.org/mantisbt/view.php?id=2079
2016-05-01 11:06:21 +01:00
5af5661e4b turbulentFluidThermoModels/derivedFvPatchFields: Updated documentation to conform to style-guide
Patch contributed by Bruno Santos
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2078
2016-05-01 09:11:42 +01:00
1b34231340 tutorials: Renamed .org -> .orig
See http://www.openfoam.org/mantisbt/view.php?id=2076
  - .org is the file extension for emacs org-mode as well
  - .orig is more to the point (.org isn't always recognized as "original")
  - .original is too long, although more consistent with the convention
    of source code file naming

Update script contributed by Bruno Santos
2016-04-30 21:53:50 +01:00
81f31acbb3 Updated headers 2016-04-30 21:53:19 +01:00
3c053c2fe6 GeometricField: Renamed internalField() -> primitiveField() and dimensionedInternalField() -> internalField()
These new names are more consistent and logical because:

primitiveField():
primitiveFieldRef():
    Provides low-level access to the Field<Type> (primitive field)
    without dimension or mesh-consistency checking.  This should only be
    used in the low-level functions where dimensional consistency is
    ensured by careful programming and computational efficiency is
    paramount.

internalField():
internalFieldRef():
    Provides access to the DimensionedField<Type, GeoMesh> of values on
    the internal mesh-type for which the GeometricField is defined and
    supports dimension and checking and mesh-consistency checking.
2016-04-30 21:40:09 +01:00
ccd958a8f1 GeometricField::dimensionedInteralFieldRef() -> GeometricField::ref()
In order to simplify expressions involving dimensioned internal field it
is preferable to use a simpler access convention.  Given that
GeometricField is derived from DimensionedField it is simply a matter of
de-referencing this underlying type unlike the boundary field which is
peripheral information.  For consistency with the new convention in
"tmp"  "dimensionedInteralFieldRef()" has been renamed "ref()".
2016-04-30 18:43:51 +01:00
68b69a25a4 CrankNicolsonDdtScheme: Use the new GeometricField constructor from DimensionedField and boundary FieldField 2016-04-30 14:29:11 +01:00
5df2b96489 GeometricField::internalField() -> GeometricField::internalFieldRef()
Non-const access to the internal field now obtained from a specifically
named access function consistent with the new names for non-canst access
to the boundary field boundaryFieldRef() and dimensioned internal field
dimensionedInternalFieldRef().

See also commit 22f4ad32b1
2016-04-30 14:25:21 +01:00
67e2d02800 functionObjectFile: Separated into functionObjectFile and functionObjectFiles
functionObjectFile provides basic directory, file and formatting functions
functionObjectFiles provides multi-file cache
2016-04-30 09:18:42 +01:00
3c61a1dbeb singlePhaseTransportModel: Added run-time type information
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2075
2016-04-29 20:21:15 +01:00
154150d710 Updated header 2016-04-29 17:18:33 +01:00
c43b78e8de List: Removed unused constructor from iterators
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2074
2016-04-29 17:17:45 +01:00
81041e5d3c functionObjects/field/histogram: New functionObject to write the volume-weighted histogram of a volScalarField
e.g.
    pressureHistogram
    {
        type            histogram;

        functionObjectLibs ("libfieldFunctionObjects.so");

        field           p;
        nBins           100;
        min             -5;
        max             5;
        setFormat       gnuplot;
    }
2016-04-28 20:40:32 +01:00
62c62abda8 fireFoam: New additional controls switch "solvePyrolysisRegion"
provides optional control for solving the pyrolysis region.

Patch contributed by Karl Meredith, FMGlobal.
2016-04-28 12:54:17 +01:00
15b36331fe Remove .internalField() clutter for const-access to the internal field 2016-04-28 12:37:31 +01:00
ea5401c770 GeometricField::GeometricBoundaryField -> GeometricField::Boundary
When the GeometricBoundaryField template class was originally written it
was a separate class in the Foam namespace rather than a sub-class of
GeometricField as it is now.  Without loss of clarity and simplifying
code which access the boundary field of GeometricFields it is better
that GeometricBoundaryField be renamed Boundary for consistency with the
new naming convention for the type of the dimensioned internal field:
Internal, see commit 4a57b9be2e

This is a very simple text substitution change which can be applied to
any code which compiles with the OpenFOAM-dev libraries.
2016-04-28 07:22:02 +01:00
4a57b9be2e GeometricField: Rationalized and simplified access to the dimensioned internal field
Given that the type of the dimensioned internal field is encapsulated in
the GeometricField class the name need not include "Field"; the type
name is "Internal" so

volScalarField::DimensionedInternalField -> volScalarField::Internal

In addition to the ".dimensionedInternalField()" access function the
simpler "()" de-reference operator is also provided to greatly simplify
FV equation source term expressions which need not evaluate boundary
conditions.  To demonstrate this kEpsilon.C has been updated to use
dimensioned internal field expressions in the k and epsilon equation
source terms.
2016-04-27 21:32:45 +01:00
c9a57e4009 tutorials/combustion/fireFoam/les: Added missing ph_rgh.orig files 2016-04-27 16:18:25 +01:00
ec5cc92d37 geometricOneField: Added support for DimensionedInternalField 2016-04-27 12:46:38 +01:00
b2ea0ab2bd DimensionedField: Corrected (currently unused) constructor from tmp 2016-04-27 12:45:55 +01:00
785cebed88 GeometricField, volFields: Added experimental member function ".v()" and perfix operator "~"
both of which return the dimensionedInternalField for volFields only.

These will be useful in FV equation source term expressions which need
not evaluate boundary conditions.
2016-04-26 20:45:53 +01:00
f539fd4c4b Replaced StaticAssert with the C++11 equivalent static_assert 2016-04-26 20:44:55 +01:00
f790663b78 src/postProcessing/functionObjects/field/Make/files: Corrected 2016-04-26 20:38:33 +01:00
070515e9db Revert "src/postProcessing/functionObjects/field/Make/files: Corrected"
This reverts commit 3cfc54ba09.
2016-04-26 20:33:45 +01:00
3cfc54ba09 src/postProcessing/functionObjects/field/Make/files: Corrected 2016-04-26 20:31:58 +01:00
dc2951ca2f GeometricField::dimensionedInternalField() -> GeometricField::dimensionedInternalFieldRef()
See also commit 22f4ad32b1
2016-04-26 16:29:43 +01:00
6962fd3ba4 fvDOM: Corrected type of maxIter_
Resolves bug-report http://openfoam.org/mantisbt/view.php?id=2068
2016-04-26 10:51:09 +01:00
4107d312fa wmake/rules/linux.*Icc: Remove -xHost option which causes surfaceFeatureExtract to fail for some cases 2016-04-25 22:29:22 +01:00
22f4ad32b1 Completed boundaryField() -> boundaryFieldRef()
Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=1938

Because C++ does not support overloading based on the return-type there
is a problem defining both const and non-const member functions which
are resolved based on the const-ness of the object for which they are
called rather than the intent of the programmer declared via the
const-ness of the returned type.  The issue for the "boundaryField()"
member function is that the non-const version increments the
event-counter and checks the state of the stored old-time fields in case
the returned value is altered whereas the const version has no
side-effects and simply returns the reference.  If the the non-const
function is called within the patch-loop the event-counter may overflow.
To resolve this it in necessary to avoid calling the non-const form of
"boundaryField()" if the results is not altered and cache the reference
outside the patch-loop when mutation of the patch fields is needed.

The most straight forward way of resolving this problem is to name the
const and non-const forms of the member functions differently e.g. the
non-const form could be named:

    mutableBoundaryField()
    mutBoundaryField()
    nonConstBoundaryField()
    boundaryFieldRef()

Given that in C++ a reference is non-const unless specified as const:
"T&" vs "const T&" the logical convention would be

    boundaryFieldRef()
    boundaryFieldConstRef()

and given that the const form which is more commonly used is it could
simply be named "boundaryField()" then the logical convention is

    GeometricBoundaryField& boundaryFieldRef();

    inline const GeometricBoundaryField& boundaryField() const;

This is also consistent with the new "tmp" class for which non-const
access to the stored object is obtained using the ".ref()" member function.

This new convention for non-const access to the components of
GeometricField will be applied to "dimensionedInternalField()" and "internalField()" in the
future, i.e. "dimensionedInternalFieldRef()" and "internalFieldRef()".
2016-04-25 16:16:05 +01:00
450728ea84 Standardized cell, patch, face and processor loop index names 2016-04-25 12:00:53 +01:00
43beb06018 Standardized cell, patch and face loop index names 2016-04-25 10:28:32 +01:00
2d5ff31649 boundaryField() -> boundaryFieldRef() 2016-04-24 22:07:37 +01:00
3758659ac6 noScatter.H: Corrected #ifdef
Resolved bug-report http://openfoam.org/mantisbt/view.php?id=2065
2016-04-24 21:05:29 +01:00
a0e86416c5 Updated header 2016-04-23 23:38:10 +01:00
d8f8498c87 boundaryField() -> boundaryFieldRef() 2016-04-23 23:37:53 +01:00
7c12f7743b boundaryField() -> boundaryFieldRef() 2016-04-23 23:16:30 +01:00
45f73bf64f GeometricField: New non-const access function boundaryFieldRef()
There is a need to specify const or non-const access to a non-const
object which is not currently possible with the "boundaryField()" access
function the const-ness of the return of which is defined by the
const-ness of the object for which it is called.  For consistency with
the latest "tmp" storage class in which non-const access is obtained
with the "ref()" function it is proposed to replace the non-const form
of "boundaryField()" with "boundaryFieldRef()".

Thanks to Mattijs Janssens for starting the process of migration to
"boundaryFieldRef()" and providing a patch for the OpenFOAM and
finiteVolume libraries.
2016-04-23 23:07:28 +01:00
88561eea95 plenumPressureFvPatchScalarField: New plenum pressure boundary condition
This condition creates a zero-dimensional model of an enclosed volume of
gas upstream of the inlet. The pressure that the boundary condition
exerts on the inlet boundary is dependent on the thermodynamic state of
the upstream volume.  The upstream plenum density and temperature are
time-stepped along with the rest of the simulation, and momentum is
neglected. The plenum is supplied with a user specified mass flow and
temperature.

The result is a boundary condition which blends between a pressure inlet
condition condition and a fixed mass flow. The smaller the plenum
volume, the quicker the pressure responds to a deviation from the supply
mass flow, and the closer the model approximates a fixed mass flow. As
the plenum size increases, the model becomes more similar to a specified
pressure.

The expansion from the plenum to the inlet boundary is controlled by an
area ratio and a discharge coefficient. The area ratio can be used to
represent further acceleration between a sub-grid blockage such as fins.
The discharge coefficient represents a fractional deviation from an
ideal expansion process.

This condition is useful for simulating unsteady internal flow problems
for which both a mass flow boundary is unrealistic, and a pressure
boundary is susceptible to flow reversal. It was developed for use in
simulating confined combustion.

tutorials/compressible/rhoPimpleFoam/laminar/helmholtzResonance:
    helmholtz resonance tutorial case for plenum pressure boundary

This development was contributed by Will Bainbridge
2016-04-23 13:43:49 +01:00
673e0d1704 fireFoam: Added optional hydrostatic initialization of the pressure and density
Also added the new prghTotalHydrostaticPressure p_rgh BC which uses the
hydrostatic pressure field as the reference state for the far-field
which provides much more accurate entrainment is large open domains
typical of many fire simulations.

The hydrostatic field solution is controlled by the optional entries in
the fvSolution.PIMPLE dictionary, e.g.

    hydrostaticInitialization yes;
    nHydrostaticCorrectors 5;

and the solver must also be specified for the hydrostatic p_rgh field
ph_rgh e.g.

    ph_rgh
    {
        $p_rgh;
    }

Suitable boundary conditions for ph_rgh cannot always be derived from
those for p_rgh and so the ph_rgh is read to provide them.

To avoid accuracy issues with IO, restart and post-processing the p_rgh
and ph_rgh the option to specify a suitable reference pressure is
provided via the optional pRef file in the constant directory, e.g.

    dimensions      [1 -1 -2 0 0 0 0];
    value           101325;

which is used in the relationship between p_rgh and p:

    p = p_rgh + rho*gh + pRef;

Note that if pRef is specified all pressure BC specifications in the
p_rgh and ph_rgh files are relative to the reference to avoid round-off
errors.

For examples of suitable BCs for p_rgh and ph_rgh for a range of
fireFoam cases please study the tutorials in
tutorials/combustion/fireFoam/les which have all been updated.

Henry G. Weller
CFD Direct Ltd.
2016-04-23 10:04:39 +01:00
6a7c4aca53 thermoSingleLayer: Corrected handling of non-constant Cp 2016-04-23 10:03:40 +01:00
a78beef988 JohnsonJacksonSchaefferFrictionalStress: Updated I2D expression 2016-04-22 15:13:45 +01:00
bbca1fd5e7 reactingTwoPhaseEulerFoam: Corrected kineticTheory frictional stress at walls
Patch contributed by Juho Peltola, VTT

The new JohnsonJacksonSchaefferFrictionalStress model is included and
the LBend tutorial case to demonstrate the need for the changes to the
frictional stress models.

Resolves bug-report http://www.openfoam.org/mantisbt/view.php?id=2058
2016-04-22 14:25:58 +01:00
bbd6bfff22 foamCalcFunctions: Avoid the inclusion of fvCFD.H 2016-04-22 14:21:50 +01:00
2e99db9c22 ENH: OSspecific - softlink handling (fixes #164)
Links are followed in most cases, with some notable exceptions:

- mv, mvBak:
  renames the link, not the underlying file/directory

- rmDir:
  remove the symlink to a directory, does not recurse into the
  underlying directory
2014-04-23 15:00:00 +02:00
7741 changed files with 268530 additions and 227048 deletions

5
.gitignore vendored
View File

@ -6,8 +6,6 @@
.*~
*.bak
*.bak[0-9][0-9]
*.orig
*.orig[0-9][0-9]
\#*\#
# File-browser settings - anywhere
@ -77,9 +75,10 @@ doc/Doxygen/DTAGS
# Ignore .tags in the main directory
/.tags
# Ignore eclipse project files in the main directory
# Ignore project files in the main directory
/.cproject
/.project
/.dir-locals.el
# Ignore the test directory
/tutorialsTest

View File

@ -1,9 +1,7 @@
#!/bin/sh
cd ${0%/*} || exit 1 # Run from this directory
# Parse arguments for library compilation without documentation by default
genDoc=0
targetType=libso
# Parse arguments for library compilation
. $WM_PROJECT_DIR/wmake/scripts/AllwmakeParseArguments
wmakeCheckPwd "$WM_PROJECT_DIR" || {
@ -27,20 +25,25 @@ if [ -d "$WM_THIRD_PARTY_DIR" ]
then
$WM_THIRD_PARTY_DIR/Allwmake
else
echo "Allwmake: no ThirdParty directory found - skipping"
echo "No ThirdParty directory found - skipping"
fi
# Compile OpenFOAM libraries and applications
echo "========================================"
echo "Compile OpenFOAM libraries"
echo
src/Allwmake $targetType $*
# Compile OpenFOAM libraries and applications
echo "========================================"
echo "Compile OpenFOAM applications"
echo
applications/Allwmake $targetType $*
# Optionally build OpenFOAM Doxygen documentation
if [ $genDoc -eq 1 ]
then
doc/Allwmake
fi
# Some summary information
echo
date "+%Y-%m-%d %H:%M:%S %z" 2>/dev/null || echo "date is unknown"
echo "========================================"
echo " ${WM_PROJECT_DIR##*/}"
echo " $WM_COMPILER $WM_COMPILER_TYPE compiler"
echo " ${WM_OPTIONS}, with ${WM_MPLIB} ${FOAM_MPI}"
echo
#------------------------------------------------------------------------------

63
BuildIssues.txt Normal file
View File

@ -0,0 +1,63 @@
OpenFOAM-v1612+
==================
Known Build Issues
==================
--------------
Intel Compiler
--------------
Since OpenFOAM uses C++11, a fairly recent version is required.
The Intel compiler - icc (ICC) 17.0.1 20161005 is ok, but the
initial release - icc (ICC) 17.0.0 20160721 - has a bug that
will result in these types of error messages.
MatrixSpaceI.H(492): error: no instance of overloaded function
"Foam::MatrixSpace<Form, Cmpt, Mrows, Ncols>::Block<SubTensor,
BRowStart, BColStart>::operator=" matches the specified type
---
VTK
---
If using the runTimePostProcessing to create on-the-fly images, you
can either simply just compile ParaView-5.0.1 and these libraries will
be used.
If you elect to use a separate VTK compilation (for example for
off-screen rendering), it is advisable to reuse the VTK libraries that
are provided with ParaView-5.0.1, by making an appropriate symlink
prior to using makeVTK. This doesn't just reduce disk-space, but works
much better than using the VTK-7.1.0.tar file.
Using runTimePostProcessing with the 'plain' VTK-7.1.0 libraries does
generally work, but does not exit cleanly:
symbol lookup error: .../linux64Gcc/VTK-7.1.0/lib/libvtkCommonExecutionModel-7.1.so.1:
undefined symbol: _ZN33vtkFilteringInformationKeyManager13ClassFinalizeEv
symbol lookup error: .../linux64Gcc/VTK-7.1.0/lib/libvtkCommonDataModel-7.1.so.1:
undefined symbol: _ZN49vtkInformationQuadratureSchemeDefinitionVectorKeyD1Ev
This error appears to be suppressed if VTK is compiled with a Debug build-type.
-------------------------
Building on older systems
-------------------------
If the system gcc is too old for building OpenFOAM, a third-party gcc or
clang/llvm installation can be used. If building clang/llvm, note that
there are also minimum gcc/g++ requirements there:
Min gcc/g++
=========== ==========
4.4 llvm-3.4.2
4.7 llvm-3.5.2 - llvm-3.7.0
If your system compiler is too old to build the minimum required gcc or
clang/llvm, it is just simply too old.
--

View File

@ -1,22 +1,26 @@
# About OpenFOAM
OpenFOAM is a free, open source CFD software package developed primarily by [OpenCFD](http://www.openfoam.com) since 2004 and is currently distributed by [ESI-OpenCFD](http://www.openfoam.com) and the [OpenFOAM Foundation](http://openfoam.org). It has a large user base across most areas of engineering and science, from both commercial and academic organisations. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to acoustics, solid mechanics and electromagnetics. [More...](http://www.openfoam.com/documentation)
OpenFOAM is a free, open source CFD software [released and developed primarily by OpenCFD Ltd](http://www.openfoam.com) since 2004released and developed primarily by. It has a large user base across most areas of engineering and science, from both commercial and academic organisations. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to acoustics, solid mechanics and electromagnetics. [More...](http://www.openfoam.com/documentation)
OpenFOAM+ uses the OpenFOAM Foundation version as a common code base, with wider functionality and platform support. Its purpose is to accelerate the public availability of new features which are sponsored by OpenCFD's customers and contributed by the OpenFOAM community.
OpenFOAM+ is professionally released every six months to include customer sponsored developments and contributions from the community, including the OpenFOAM Foundation. Releases designated OpenFOAM+ contain several man years of client-sponsored developments of which much has been transferred to, but not released in the OpenFOAM Foundation branch.
# Copyright
OpenFOAM+ is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. See the file COPYING in this directory or [http://www.gnu.org/licenses/](http://www.gnu.org/licenses/), for a description of the GNU General Public License terms under which you can copy the files.
OpenFOAM is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. See the file COPYING in this directory or [http://www.gnu.org/licenses/](http://www.gnu.org/licenses), for a description of the GNU General Public License terms under which you can copy the files.
# OpenFOAM Trademark
OpenCFD Limited, owner of the OpenFOAM Trademark, has granted the use of the Trademark to the OpenFOAM Foundation. Violations of the Trademark are continuously monitored and will be duly prosecuted. Please [contact OpenCFD](http://www.openfoam.com/contact) if you have any questions on the use of the OpenFOAM trademark.
OpenCFD Ltd grants use of the OpenFOAM trademark by Third Parties on a licence basis. ESI Group and the OpenFOAM Foundation Ltd are currently permitted to use the trademark. For information on trademark use, please refer to the [trademark policy guidelines](http://www.openfoam.com/legal/trademark-policy.php).
Please [contact OpenCFD](http://www.openfoam.com/contact) if you have any questions on the use of the OpenFOAM trademark.
Violations of the Trademark are continuously monitored, and will be duly prosecuted.
# Useful Links
- [Download and installation instructions](http://www.openfoam.com/releases)
- [Download and installation instructions](http://www.openfoam.com/download/)
- [Documentation](http://www.openfoam.com/documentation)
- [Reporting bugs/issues (including bugs/suggestions/feature requests) in OpenFOAM+](http://www.openfoam.com/code/bug-reporting.php)
- [Collaborative and Community-based Developments](http://www.openfoam.com/services/community-projects.php)
- [Contacting OpenCFD](http://www.openfoam.com/contact)
- [Reporting bugs/issues/feature requests](http://www.openfoam.com/code/bug-reporting.php)
- [OpenFOAM Community](http://www.openfoam.com/community/)
- [Contacting OpenCFD](http://www.openfoam.com/contact/)
Copyright 2016 OpenCFD Ltd

View File

@ -2,7 +2,6 @@
cd ${0%/*} || exit 1 # Run from this directory
# Parse arguments for library compilation
targetType=libso
. $WM_PROJECT_DIR/wmake/scripts/AllwmakeParseArguments
wmakeCheckPwd "$WM_PROJECT_DIR/applications" || {
@ -18,10 +17,7 @@ wmakeCheckPwd "$WM_PROJECT_DIR/applications" || {
exit 1
}
set -x
wmake -all solvers $*
wmake -all utilities $*
wmake -all $targetType solvers
wmake -all $targetType utilities
#------------------------------------------------------------------------------

View File

@ -6,9 +6,7 @@ if [ -f "$FFTW_ARCH_PATH/include/fftw3.h" ] || \
then
wmake
else
echo
echo "Skipping dnsFoam solver (no FFTW)"
echo
echo "==> skip dnsFoam solver (no FFTW)"
fi
#------------------------------------------------------------------------------

View File

@ -1,3 +1,5 @@
#include "readTransportProperties.H"
Info<< "Reading field p\n" << endl;
volScalarField p
(
@ -29,3 +31,5 @@ volVectorField U
#include "createPhi.H"
mesh.setFluxRequired(p.name());
#include "readTurbulenceProperties.H"

View File

@ -28,7 +28,7 @@ Group
grpDNSSolvers
Description
Direct numerical simulation solver for boxes of isotropic turbulence
Direct numerical simulation solver for boxes of isotropic turbulence.
\*---------------------------------------------------------------------------*/
@ -44,16 +44,13 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMeshNoClear.H"
pisoControl piso(mesh);
#include "readTransportProperties.H"
#include "createControl.H"
#include "createFields.H"
#include "readTurbulenceProperties.H"
#include "initContinuityErrs.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -64,7 +61,7 @@ int main(int argc, char *argv[])
{
Info<< "Time = " << runTime.timeName() << nl << endl;
force.internalField() = ReImSum
force.primitiveFieldRef() = ReImSum
(
fft::reverseTransform
(
@ -119,7 +116,7 @@ int main(int argc, char *argv[])
runTime.write();
if (runTime.outputTime())
if (runTime.writeTime())
{
calcEk(U, K).write
(

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -52,6 +52,7 @@ Description
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "fvOptions.H"
#include "simpleControl.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -66,6 +67,7 @@ int main(int argc, char *argv[])
simpleControl simple(mesh);
#include "createFields.H"
#include "createFvOptions.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -77,10 +79,16 @@ int main(int argc, char *argv[])
while (simple.correctNonOrthogonal())
{
solve
fvScalarMatrix TEqn
(
fvm::ddt(T) - fvm::laplacian(DT, T)
==
fvOptions(T)
);
fvOptions.constrain(TEqn);
TEqn.solve();
fvOptions.correct(T);
}
#include "write.H"

View File

@ -1,4 +1,4 @@
if (runTime.outputTime())
if (runTime.writeTime())
{
volVectorField gradT(fvc::grad(T));

View File

@ -0,0 +1,9 @@
const dictionary& potentialFlow
(
mesh.solutionDict().subDict("potentialFlow")
);
const int nNonOrthCorr
(
potentialFlow.lookupOrDefault<int>("nNonOrthogonalCorrectors", 0)
);

View File

@ -43,7 +43,7 @@ word pName("p");
// Update name of the pressure field from the command-line option
args.optionReadIfPresent("pName", pName);
// Infer the pressure BCs from the velocity BCs
// Infer the pressure BCs from the velocity
wordList pBCTypes
(
U.boundaryField().size(),
@ -78,62 +78,36 @@ volScalarField p
pBCTypes
);
label pRefCell = 0;
scalar pRefValue = 0.0;
if (args.optionFound("writep"))
{
setRefCell
(
p,
potentialFlow.dict(),
pRefCell,
pRefValue
);
}
Info<< "Constructing velocity potential field Phi\n" << endl;
autoPtr<volScalarField> PhiPtr;
IOobject io
// Infer the velocity potential BCs from the pressure
wordList PhiBCTypes
(
"Phi",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::NO_WRITE
p.boundaryField().size(),
zeroGradientFvPatchScalarField::typeName
);
if (io.typeHeaderOk<volScalarField>())
forAll(p.boundaryField(), patchi)
{
PhiPtr.reset(new volScalarField(io, mesh));
}
else
{
// Cannot just use p.boundaryField().types() since does not initialise
// complex boundary types. Instead re-clone them from p.
io.readOpt() = IOobject::NO_READ;
PhiPtr.reset
(
new volScalarField
(
io,
mesh,
dimensionedScalar("Phi", dimLength*dimVelocity, 0),
p.boundaryField().types()
)
);
const volScalarField::GeometricBoundaryField& bp = p.boundaryField();
volScalarField::GeometricBoundaryField& bPhi = PhiPtr().boundaryField();
forAll(bp, patchI)
if (p.boundaryField()[patchi].fixesValue())
{
bPhi.set(patchI, bp[patchI].clone(PhiPtr().dimensionedInternalField()));
PhiBCTypes[patchi] = fixedValueFvPatchScalarField::typeName;
}
}
volScalarField& Phi = PhiPtr();
Info<< "Constructing velocity potential field Phi\n" << endl;
volScalarField Phi
(
IOobject
(
"Phi",
runTime.timeName(),
mesh,
IOobject::READ_IF_PRESENT,
IOobject::NO_WRITE
),
mesh,
dimensionedScalar("Phi", dimLength*dimVelocity, 0),
PhiBCTypes
);
label PhiRefCell = 0;
scalar PhiRefValue = 0;
@ -145,3 +119,5 @@ setRefCell
PhiRefValue
);
mesh.setFluxRequired(Phi.name());
#include "createMRF.H"

View File

@ -28,7 +28,9 @@ Group
grpBasicSolvers
Description
Potential flow solver.
Potential flow solver which solves for the velocity potential, to
calculate the flux-field, from which the velocity field is obtained by
reconstructing the flux.
\heading Solver details
The potential flow solution is typically employed to generate initial fields
@ -130,7 +132,6 @@ int main(int argc, char *argv[])
pisoControl potentialFlow(mesh, "potentialFlow");
#include "createFields.H"
#include "createMRF.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -87,17 +87,16 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "readCombustionProperties.H"
#include "readGravitationalAcceleration.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "initContinuityErrs.H"
#include "createTimeControls.H"
@ -113,7 +112,7 @@ int main(int argc, char *argv[])
while (runTime.run())
{
#include "createTimeControls.H"
#include "readTimeControls.H"
#include "compressibleCourantNo.H"
#include "setDeltaT.H"

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -98,7 +98,7 @@ int main(int argc, char *argv[])
while (runTime.run())
{
#include "createTimeControls.H"
#include "readTimeControls.H"
#include "compressibleCourantNo.H"
#include "setDeltaT.H"
@ -131,11 +131,11 @@ int main(int argc, char *argv[])
protectedCell = 0;
}
forAll(betav, cellI)
forAll(betav, celli)
{
if (betav[cellI] < 0.99)
if (betav[celli] < 0.99)
{
protectedCell[cellI] = 1;
protectedCell[celli] = 1;
}
}

View File

@ -105,7 +105,7 @@ Foam::tmp<Foam::volScalarField> Foam::XiEqModels::basicSubGrid::XiEq() const
mesh,
dimensionedScalar("zero", Nv.dimensions(), 0.0)
);
N.internalField() = Nv.internalField()*Cw;
N.primitiveFieldRef() = Nv.primitiveField()*Cw;
volSymmTensorField ns
(
@ -125,7 +125,7 @@ Foam::tmp<Foam::volScalarField> Foam::XiEqModels::basicSubGrid::XiEq() const
Zero
)
);
ns.internalField() = nsv.internalField()*Cw;
ns.primitiveFieldRef() = nsv.primitiveField()*Cw;
volScalarField n(max(N - (Uhat & ns & Uhat), scalar(1e-4)));
volScalarField b((Uhat & B_ & Uhat)/sqrt(n));

View File

@ -73,7 +73,7 @@ Foam::tmp<Foam::volScalarField> Foam::XiGModels::basicSubGrid::G() const
volScalarField& Gtot = tGtot.ref();
const scalarField Cw = pow(Su_.mesh().V(), 2.0/3.0);
scalarField N(Nv.internalField()*Cw);
scalarField N(Nv.primitiveField()*Cw);
forAll(N, celli)
{

View File

@ -130,7 +130,7 @@ void PDRkEpsilon::correct()
tgradU.clear();
// Update espsilon and G at the wall
epsilon_.boundaryField().updateCoeffs();
epsilon_.boundaryFieldRef().updateCoeffs();
// Add the blockage generation term so that it is included consistently
// in both the k and epsilon equations
@ -163,7 +163,7 @@ void PDRkEpsilon::correct()
epsEqn.ref().relax();
epsEqn.ref().boundaryManipulate(epsilon_.boundaryField());
epsEqn.ref().boundaryManipulate(epsilon_.boundaryFieldRef());
solve(epsEqn);
bound(epsilon_, epsilonMin_);

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -36,8 +36,8 @@ Description
{
scalarField sumPhi
(
fvc::surfaceSum(mag(phiSt))().internalField()
/ rho.internalField()
fvc::surfaceSum(mag(phiSt))().primitiveField()
/ rho.primitiveField()
);
StCoNum = 0.5*gMax(sumPhi/mesh.V().field())*runTime.deltaTValue();

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -74,7 +74,7 @@ Foam::tmp<Foam::volScalarField> Foam::XiEqModels::Gulder::XiEq() const
if (subGridSchelkin_)
{
up.internalField() += calculateSchelkinEffect(uPrimeCoef_);
up.primitiveFieldRef() += calculateSchelkinEffect(uPrimeCoef_);
}
volScalarField tauEta(sqrt(mag(thermo_.muu()/(thermo_.rhou()*epsilon))));

View File

@ -82,7 +82,7 @@ Foam::tmp<Foam::volScalarField> Foam::XiEqModels::SCOPEXiEq::XiEq() const
volScalarField up(sqrt((2.0/3.0)*k));
if (subGridSchelkin_)
{
up.internalField() += calculateSchelkinEffect(uPrimeCoef_);
up.primitiveFieldRef() += calculateSchelkinEffect(uPrimeCoef_);
}
volScalarField l(lCoef_*sqrt(3.0/2.0)*up*k/epsilon);
@ -119,9 +119,11 @@ Foam::tmp<Foam::volScalarField> Foam::XiEqModels::SCOPEXiEq::XiEq() const
}
}
volScalarField::Boundary& xieqBf = xieq.boundaryFieldRef();
forAll(xieq.boundaryField(), patchi)
{
scalarField& xieqp = xieq.boundaryField()[patchi];
scalarField& xieqp = xieqBf[patchi];
const scalarField& Kp = K.boundaryField()[patchi];
const scalarField& Map = Ma.boundaryField()[patchi];
const scalarField& upBySup = upBySu.boundaryField()[patchi];

View File

@ -114,7 +114,7 @@ Foam::XiEqModel::calculateSchelkinEffect(const scalar uPrimeCoef) const
)
);
volScalarField& N = tN.ref();
N.internalField() = Nv.internalField()*pow(mesh.V(), 2.0/3.0);
N.primitiveFieldRef() = Nv.primitiveField()*pow(mesh.V(), 2.0/3.0);
volSymmTensorField ns
(
@ -134,7 +134,7 @@ Foam::XiEqModel::calculateSchelkinEffect(const scalar uPrimeCoef) const
Zero
)
);
ns.internalField() = nsv.internalField()*pow(mesh.V(), 2.0/3.0);
ns.primitiveFieldRef() = nsv.primitiveField()*pow(mesh.V(), 2.0/3.0);
const volVectorField Uhat
(
@ -150,7 +150,7 @@ Foam::XiEqModel::calculateSchelkinEffect(const scalar uPrimeCoef) const
const scalarField deltaUp(upLocal*(max(scalar(1.0), pow(nr, 0.5)) - 1.0));
// Re use tN
N.internalField() = upLocal*(max(scalar(1.0), pow(nr, 0.5)) - 1.0);
N.primitiveFieldRef() = upLocal*(max(scalar(1.0), pow(nr, 0.5)) - 1.0);
return tN;
}

View File

@ -0,0 +1 @@
const volScalarField& psi = thermo.psi();

View File

@ -23,7 +23,6 @@ volScalarField rho
);
volScalarField& p = thermo.p();
const volScalarField& psi = thermo.psi();
volScalarField& b = composition.Y("b");
Info<< "min(b) = " << min(b).value() << endl;
@ -227,3 +226,5 @@ fields.add(b);
fields.add(thermo.he());
fields.add(thermo.heu());
flameWrinkling->addXi(fields);
#include "createMRF.H"

View File

@ -266,9 +266,11 @@ Foam::tmp<Foam::volScalarField> Foam::laminarFlameSpeedModels::SCOPE::Su0pTphi
Su0[celli] = Su0pTphi(p[celli], Tu[celli], phi);
}
forAll(Su0.boundaryField(), patchi)
volScalarField::Boundary& Su0Bf = Su0.boundaryFieldRef();
forAll(Su0Bf, patchi)
{
scalarField& Su0p = Su0.boundaryField()[patchi];
scalarField& Su0p = Su0Bf[patchi];
const scalarField& pp = p.boundaryField()[patchi];
const scalarField& Tup = Tu.boundaryField()[patchi];
@ -313,9 +315,11 @@ Foam::tmp<Foam::volScalarField> Foam::laminarFlameSpeedModels::SCOPE::Su0pTphi
Su0[celli] = Su0pTphi(p[celli], Tu[celli], phi[celli]);
}
forAll(Su0.boundaryField(), patchi)
volScalarField::Boundary& Su0Bf = Su0.boundaryFieldRef();
forAll(Su0Bf, patchi)
{
scalarField& Su0p = Su0.boundaryField()[patchi];
scalarField& Su0p = Su0Bf[patchi];
const scalarField& pp = p.boundaryField()[patchi];
const scalarField& Tup = Tu.boundaryField()[patchi];
const scalarField& phip = phi.boundaryField()[patchi];
@ -365,9 +369,11 @@ Foam::tmp<Foam::volScalarField> Foam::laminarFlameSpeedModels::SCOPE::Ma
ma[celli] = Ma(phi[celli]);
}
forAll(ma.boundaryField(), patchi)
volScalarField::Boundary& maBf = ma.boundaryFieldRef();
forAll(maBf, patchi)
{
scalarField& map = ma.boundaryField()[patchi];
scalarField& map = maBf[patchi];
const scalarField& phip = phi.boundaryField()[patchi];
forAll(map, facei)

View File

@ -3,7 +3,7 @@
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\/ M anipulation | Copyright (C) 2015 OpenCFD Ltd.
\\/ M anipulation | Copyright (C) 2015-2016 OpenCFD Ltd.
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
@ -67,25 +67,26 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createDynamicFvMesh.H"
#include "initContinuityErrs.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "readCombustionProperties.H"
#include "readGravitationalAcceleration.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "initContinuityErrs.H"
#include "createRhoUf.H"
#include "createControls.H"
#include "initContinuityErrs.H"
#include "compressibleCourantNo.H"
#include "setInitialDeltaT.H"
turbulence->validate();
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Info<< "\nStarting time loop\n" << endl;

View File

@ -1,7 +1,6 @@
#include "readTimeControls.H"
#include "readTimeControls.H"
bool correctPhi =
pimple.dict().lookupOrDefault<Switch>("correctPhi", true);
correctPhi = pimple.dict().lookupOrDefault<Switch>("correctPhi", true);
bool checkMeshCourantNo =
pimple.dict().lookupOrDefault<Switch>("checkMeshCourantNo", false);
checkMeshCourantNo =
pimple.dict().lookupOrDefault<Switch>("checkMeshCourantNo", false);

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -65,16 +65,15 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "readCombustionProperties.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "initContinuityErrs.H"
#include "createTimeControls.H"
@ -89,7 +88,7 @@ int main(int argc, char *argv[])
while (runTime.run())
{
#include "createTimeControls.H"
#include "readTimeControls.H"
#include "compressibleCourantNo.H"
#include "setDeltaT.H"

View File

@ -0,0 +1 @@
const volScalarField& psi = thermo.psi();

View File

@ -23,7 +23,6 @@ volScalarField rho
);
volScalarField& p = thermo.p();
const volScalarField& psi = thermo.psi();
volScalarField& b = composition.Y("b");
Info<< "min(b) = " << min(b).value() << endl;
@ -139,3 +138,5 @@ if (composition.contains("ft"))
fields.add(b);
fields.add(thermo.he());
fields.add(thermo.heu());
#include "createMRF.H"

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,12 +28,10 @@ Group
grpCombustionSolvers
Description
Solver for chemistry problems designed for use on single cell cases to
provide comparison against other chemistry solvers
Solver for chemistry problems, designed for use on single cell cases to
provide comparison against other chemistry solvers, that uses a single cell
mesh, and fields created from the initial conditions.
Note:
- single cell mesh created on-the-fly
- fields created on the fly from the initial conditions
\*---------------------------------------------------------------------------*/
@ -52,10 +50,15 @@ int main(int argc, char *argv[])
{
argList::noParallel();
#define CREATE_MESH createSingleCellMesh.H
#define NO_CONTROL
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createSingleCellMesh.H"
#include "createFields.H"
#include "createFieldRefs.H"
#include "readInitialConditions.H"
#include "createControls.H"

View File

@ -0,0 +1,4 @@
scalar dtChem = refCast<const psiChemistryModel>(chemistry).deltaTChem()[0];
basicMultiComponentMixture& composition = thermo.composition();
PtrList<volScalarField>& Y = composition.Y();
volScalarField& p = thermo.p();

View File

@ -12,7 +12,7 @@
(
"initialConditions",
runTime.constant(),
runTime,
mesh,
IOobject::MUST_READ_IF_MODIFIED,
IOobject::NO_WRITE
)
@ -27,36 +27,30 @@
autoPtr<psiChemistryModel> pChemistry(psiChemistryModel::New(mesh));
psiChemistryModel& chemistry = pChemistry();
scalar dtChem = refCast<const psiChemistryModel>(chemistry).deltaTChem()[0];
psiReactionThermo& thermo = chemistry.thermo();
thermo.validate(args.executable(), "h");
basicMultiComponentMixture& composition = thermo.composition();
PtrList<volScalarField>& Y = composition.Y();
volScalarField rho
(
IOobject
(
"rho",
runTime.timeName(),
runTime,
mesh,
IOobject::NO_READ,
IOobject::AUTO_WRITE
),
thermo.rho()
);
volScalarField& p = thermo.p();
volScalarField Rspecific
(
IOobject
(
"Rspecific",
runTime.timeName(),
runTime,
mesh,
IOobject::NO_READ,
IOobject::AUTO_WRITE
),
@ -75,7 +69,7 @@
(
"U",
runTime.timeName(),
runTime,
mesh,
IOobject::NO_READ,
IOobject::NO_WRITE
),

View File

@ -1,4 +1,5 @@
EXE_INC = \
-I. \
-I../engineFoam \
-I../XiFoam \
-I../../compressible/rhoPimpleFoam \

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -45,15 +45,16 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#define CREATE_TIME createEngineTime.H
#define CREATE_MESH createEngineMesh.H
#include "postProcess.H"
#include "setRootCase.H"
#include "createEngineTime.H"
#include "createEngineMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "createRhoUf.H"
#include "initContinuityErrs.H"

View File

@ -0,0 +1,2 @@
const volScalarField& psi = thermo.psi();
const volScalarField& T = thermo.T();

View File

@ -1,71 +1,70 @@
Info<< "Reading thermophysical properties\n" << endl;
Info<< "Reading thermophysical properties\n" << endl;
autoPtr<psiThermo> pThermo
autoPtr<psiThermo> pThermo
(
psiThermo::New(mesh)
);
psiThermo& thermo = pThermo();
thermo.validate(args.executable(), "h", "e");
volScalarField rho
(
IOobject
(
psiThermo::New(mesh)
);
psiThermo& thermo = pThermo();
thermo.validate(args.executable(), "h", "e");
volScalarField rho
(
IOobject
(
"rho",
runTime.timeName(),
mesh,
IOobject::NO_READ,
IOobject::AUTO_WRITE
),
thermo.rho()
);
volScalarField& p = thermo.p();
const volScalarField& psi = thermo.psi();
const volScalarField& T = thermo.T();
Info<< "\nReading field U\n" << endl;
volVectorField U
(
IOobject
(
"U",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
#include "compressibleCreatePhi.H"
Info<< "Creating turbulence model\n" << endl;
autoPtr<compressible::turbulenceModel> turbulence
(
compressible::turbulenceModel::New
(
rho,
U,
phi,
thermo
)
);
Info<< "Creating field dpdt\n" << endl;
volScalarField dpdt
(
IOobject
(
"dpdt",
runTime.timeName(),
mesh
),
"rho",
runTime.timeName(),
mesh,
dimensionedScalar("dpdt", p.dimensions()/dimTime, 0)
);
IOobject::NO_READ,
IOobject::AUTO_WRITE
),
thermo.rho()
);
Info<< "Creating field kinetic energy K\n" << endl;
volScalarField K("K", 0.5*magSqr(U));
volScalarField& p = thermo.p();
Info<< "\nReading field U\n" << endl;
volVectorField U
(
IOobject
(
"U",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
#include "compressibleCreatePhi.H"
Info<< "Creating turbulence model\n" << endl;
autoPtr<compressible::turbulenceModel> turbulence
(
compressible::turbulenceModel::New
(
rho,
U,
phi,
thermo
)
);
Info<< "Creating field dpdt\n" << endl;
volScalarField dpdt
(
IOobject
(
"dpdt",
runTime.timeName(),
mesh
),
mesh,
dimensionedScalar("dpdt", p.dimensions()/dimTime, 0)
);
Info<< "Creating field kinetic energy K\n" << endl;
volScalarField K("K", 0.5*magSqr(U));
#include "createMRF.H"

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -68,16 +68,17 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#define CREATE_TIME createEngineTime.H
#define CREATE_MESH createEngineMesh.H
#include "postProcess.H"
#include "setRootCase.H"
#include "createEngineTime.H"
#include "createEngineMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "readCombustionProperties.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "createRhoUf.H"
#include "initContinuityErrs.H"

View File

@ -21,7 +21,6 @@ EXE_INC = \
-I$(LIB_SRC)/thermophysicalModels/reactionThermo/lnInclude \
-I$(LIB_SRC)/thermophysicalModels/SLGThermo/lnInclude \
-I$(LIB_SRC)/thermophysicalModels/radiation/lnInclude \
-I$(LIB_SRC)/combustionModels/lnInclude \
-I$(LIB_SRC)/regionModels/regionModel/lnInclude \
-I$(LIB_SRC)/regionModels/surfaceFilmModels/lnInclude \
-I$(LIB_SRC)/regionModels/pyrolysisModels/lnInclude \
@ -29,7 +28,6 @@ EXE_INC = \
-I$(LIB_SRC)/lagrangian/intermediate/lnInclude \
-I$(LIB_SRC)/ODE/lnInclude
EXE_LIBS = \
-lfiniteVolume \
-lfvOptions \

View File

@ -9,15 +9,13 @@ tmp<fv::convectionScheme<scalar>> mvConvection
)
);
{
radiation->correct();
combustion->correct();
dQ = combustion->dQ();
label inertIndex = -1;
volScalarField Yt(0.0*Y[0]);
forAll(Y, i)
{
if (Y[i].name() != inertSpecie)
if (i != inertIndex && composition.active(i))
{
volScalarField& Yi = Y[i];
@ -44,10 +42,6 @@ tmp<fv::convectionScheme<scalar>> mvConvection
Yi.max(0.0);
Yt += Yi;
}
else
{
inertIndex = i;
}
}
Y[inertIndex] = scalar(1) - Yt;

View File

@ -0,0 +1,4 @@
const volScalarField& psi = thermo.psi();
const volScalarField& T = thermo.T();
filmModelType& surfaceFilm = tsurfaceFilm();
const label inertIndex(composition.species()[inertSpecie]);

View File

@ -19,6 +19,13 @@ basicMultiComponentMixture& composition = thermo.composition();
PtrList<volScalarField>& Y = composition.Y();
const word inertSpecie(thermo.lookup("inertSpecie"));
if (!composition.species().found(inertSpecie))
{
FatalIOErrorIn(args.executable().c_str(), thermo)
<< "Inert specie " << inertSpecie << " not found in available species "
<< composition.species()
<< exit(FatalIOError);
}
Info<< "Creating field rho\n" << endl;
volScalarField rho
@ -35,8 +42,6 @@ volScalarField rho
);
volScalarField& p = thermo.p();
const volScalarField& T = thermo.T();
const volScalarField& psi = thermo.psi();
Info<< "\nReading field U\n" << endl;
volVectorField U
@ -54,6 +59,9 @@ volVectorField U
#include "compressibleCreatePhi.H"
#include "createMRF.H"
Info<< "Creating turbulence model\n" << endl;
autoPtr<compressible::turbulenceModel> turbulence
(
@ -69,6 +77,60 @@ autoPtr<compressible::turbulenceModel> turbulence
// Set the turbulence into the combustion model
combustion->setTurbulence(turbulence());
#include "readGravitationalAcceleration.H"
#include "readhRef.H"
#include "gh.H"
#include "readpRef.H"
volScalarField p_rgh
(
IOobject
(
"p_rgh",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
mesh.setFluxRequired(p_rgh.name());
#include "phrghEqn.H"
multivariateSurfaceInterpolationScheme<scalar>::fieldTable fields;
forAll(Y, i)
{
fields.add(Y[i]);
}
fields.add(thermo.he());
IOdictionary additionalControlsDict
(
IOobject
(
"additionalControls",
runTime.constant(),
mesh,
IOobject::MUST_READ_IF_MODIFIED,
IOobject::NO_WRITE
)
);
Switch solvePrimaryRegion
(
additionalControlsDict.lookup("solvePrimaryRegion")
);
Switch solvePyrolysisRegion
(
additionalControlsDict.lookupOrDefault<bool>("solvePyrolysisRegion", true)
);
volScalarField dQ
(
IOobject
@ -100,51 +162,7 @@ volScalarField dpdt
Info<< "Creating field kinetic energy K\n" << endl;
volScalarField K("K", 0.5*magSqr(U));
#include "readGravitationalAcceleration.H"
#include "readhRef.H"
#include "gh.H"
volScalarField p_rgh
(
IOobject
(
"p_rgh",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
// Force p_rgh to be consistent with p
p_rgh = p - rho*gh;
mesh.setFluxRequired(p_rgh.name());
multivariateSurfaceInterpolationScheme<scalar>::fieldTable fields;
forAll(Y, i)
{
fields.add(Y[i]);
}
fields.add(thermo.he());
IOdictionary additionalControlsDict
(
IOobject
(
"additionalControls",
runTime.constant(),
mesh,
IOobject::MUST_READ_IF_MODIFIED,
IOobject::NO_WRITE
)
);
Switch solvePrimaryRegion
(
additionalControlsDict.lookup("solvePrimaryRegion")
);
#include "createClouds.H"
#include "createSurfaceFilmModel.H"
#include "createPyrolysisModel.H"
#include "createRadiationModel.H"

View File

@ -3,4 +3,3 @@ Info<< "\nConstructing surface film model" << endl;
typedef regionModels::surfaceFilmModels::surfaceFilmModel filmModelType;
autoPtr<filmModelType> tsurfaceFilm(filmModelType::New(mesh, g));
filmModelType& surfaceFilm = tsurfaceFilm();

View File

@ -28,8 +28,8 @@ Group
grpCombustionSolvers
Description
Transient PIMPLE solver for fires and turbulent diffusion flames with
reacting Lagrangian parcels, surface film and pyrolysis modelling.
Transient solver for fires and turbulent diffusion flames with reacting
particle clouds, surface film and pyrolysis modelling.
\*---------------------------------------------------------------------------*/
@ -49,20 +49,15 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "createClouds.H"
#include "createSurfaceFilmModel.H"
#include "createPyrolysisModel.H"
#include "createRadiationModel.H"
#include "initContinuityErrs.H"
#include "createTimeControls.H"
#include "compressibleCourantNo.H"
@ -77,7 +72,7 @@ int main(int argc, char *argv[])
while (runTime.run())
{
#include "createTimeControls.H"
#include "readTimeControls.H"
#include "compressibleCourantNo.H"
#include "solidRegionDiffusionNo.H"
#include "setMultiRegionDeltaT.H"
@ -91,7 +86,10 @@ int main(int argc, char *argv[])
surfaceFilm.evolve();
pyrolysis.evolve();
if(solvePyrolysisRegion)
{
pyrolysis.evolve();
}
if (solvePrimaryRegion)
{

View File

@ -4,7 +4,7 @@ volScalarField rAU(1.0/UEqn.A());
surfaceScalarField rhorAUf("rhorAUf", fvc::interpolate(rho*rAU));
volVectorField HbyA(constrainHbyA(rAU*UEqn.H(), U, p));
surfaceScalarField phig(-rhorAUf*ghf*fvc::snGrad(rho)*mesh.magSf());
surfaceScalarField phig("phig", -rhorAUf*ghf*fvc::snGrad(rho)*mesh.magSf());
surfaceScalarField phiHbyA
(
@ -25,9 +25,10 @@ while (pimple.correctNonOrthogonal())
{
fvScalarMatrix p_rghEqn
(
fvc::ddt(psi, rho)*gh
fvm::ddt(psi, p_rgh)
+ fvc::ddt(psi, rho)*gh
+ fvc::ddt(psi)*pRef
+ fvc::div(phiHbyA)
+ fvm::ddt(psi, p_rgh)
- fvm::laplacian(rhorAUf, p_rgh)
==
parcels.Srho()
@ -46,7 +47,7 @@ while (pimple.correctNonOrthogonal())
}
}
p = p_rgh + rho*gh;
p = p_rgh + rho*gh + pRef;
#include "rhoEqn.H"
#include "compressibleContinuityErrs.H"

View File

@ -0,0 +1,62 @@
if (pimple.dict().lookupOrDefault<bool>("hydrostaticInitialization", false))
{
volScalarField& ph_rgh = regIOobject::store
(
new volScalarField
(
IOobject
(
"ph_rgh",
"0",
mesh,
IOobject::MUST_READ,
IOobject::NO_WRITE
),
mesh
)
);
if (equal(runTime.value(), 0))
{
p = ph_rgh + rho*gh + pRef;
thermo.correct();
rho = thermo.rho();
label nCorr
(
pimple.dict().lookupOrDefault<label>("nHydrostaticCorrectors", 5)
);
for (label i=0; i<nCorr; i++)
{
surfaceScalarField rhof("rhof", fvc::interpolate(rho));
surfaceScalarField phig
(
"phig",
-rhof*ghf*fvc::snGrad(rho)*mesh.magSf()
);
// Update the pressure BCs to ensure flux consistency
constrainPressure(ph_rgh, rho, U, phig, rhof);
fvScalarMatrix ph_rghEqn
(
fvm::laplacian(rhof, ph_rgh) == fvc::div(phig)
);
ph_rghEqn.solve();
p = ph_rgh + rho*gh + pRef;
thermo.correct();
rho = thermo.rho();
Info<< "Hydrostatic pressure variation "
<< (max(ph_rgh) - min(ph_rgh)).value() << endl;
}
ph_rgh.write();
p_rgh = ph_rgh;
}
}

View File

@ -12,12 +12,11 @@ tmp<fv::convectionScheme<scalar>> mvConvection
{
reaction->correct();
dQ = reaction->dQ();
label inertIndex = -1;
volScalarField Yt(0.0*Y[0]);
forAll(Y, i)
{
if (Y[i].name() != inertSpecie)
if (i != inertIndex && composition.active(i))
{
volScalarField& Yi = Y[i];
@ -42,10 +41,6 @@ tmp<fv::convectionScheme<scalar>> mvConvection
Yi.max(0.0);
Yt += Yi;
}
else
{
inertIndex = i;
}
}
Y[inertIndex] = scalar(1) - Yt;

View File

@ -0,0 +1,3 @@
const volScalarField& psi = thermo.psi();
const volScalarField& T = thermo.T();
const label inertIndex(composition.species()[inertSpecie]);

View File

@ -1,3 +1,5 @@
#include "createRDeltaT.H"
Info<< "Creating reaction model\n" << endl;
autoPtr<combustionModels::psiCombustionModel> reaction
@ -11,7 +13,14 @@ thermo.validate(args.executable(), "h", "e");
basicMultiComponentMixture& composition = thermo.composition();
PtrList<volScalarField>& Y = composition.Y();
word inertSpecie(thermo.lookup("inertSpecie"));
const word inertSpecie(thermo.lookup("inertSpecie"));
if (!composition.species().found(inertSpecie))
{
FatalIOErrorIn(args.executable().c_str(), thermo)
<< "Inert specie " << inertSpecie << " not found in available species "
<< composition.species()
<< exit(FatalIOError);
}
volScalarField rho
(
@ -40,8 +49,6 @@ volVectorField U
volScalarField& p = thermo.p();
const volScalarField& psi = thermo.psi();
const volScalarField& T = thermo.T();
#include "compressibleCreatePhi.H"
@ -123,3 +130,5 @@ volScalarField dQ
mesh,
dimensionedScalar("dQ", dimEnergy/dimTime, 0.0)
);
#include "createMRF.H"

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -45,17 +45,16 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "createTimeControls.H"
#include "createRDeltaT.H"
#include "initContinuityErrs.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
turbulence->validate();

View File

@ -1,4 +1,5 @@
EXE_INC = \
-I. \
-I$(FOAM_SOLVERS)/combustion/reactingFoam \
-I$(LIB_SRC)/finiteVolume/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \

View File

@ -0,0 +1,3 @@
const volScalarField& psi = thermo.psi();
const volScalarField& T = thermo.T();
const label inertIndex(composition.species()[inertSpecie]);

View File

@ -1,3 +1,5 @@
#include "createRDeltaT.H"
Info<< "Creating reaction model\n" << endl;
autoPtr<combustionModels::rhoCombustionModel> reaction
@ -11,7 +13,14 @@ thermo.validate(args.executable(), "h", "e");
basicMultiComponentMixture& composition = thermo.composition();
PtrList<volScalarField>& Y = composition.Y();
word inertSpecie(thermo.lookup("inertSpecie"));
const word inertSpecie(thermo.lookup("inertSpecie"));
if (!composition.species().found(inertSpecie))
{
FatalIOErrorIn(args.executable().c_str(), thermo)
<< "Inert specie " << inertSpecie << " not found in available species "
<< composition.species()
<< exit(FatalIOError);
}
volScalarField rho
(
@ -40,8 +49,6 @@ volVectorField U
volScalarField& p = thermo.p();
const volScalarField& psi = thermo.psi();
const volScalarField& T = thermo.T();
#include "compressibleCreatePhi.H"
@ -123,3 +130,5 @@ volScalarField dQ
mesh,
dimensionedScalar("dQ", dimEnergy/dimTime, 0.0)
);
#include "createMRF.H"

View File

@ -28,8 +28,8 @@ Group
grpCombustionSolvers
Description
Solver for combustion with chemical reactions using density based
thermodynamics package, using enahanced buoyancy treatment.
Solver for combustion with chemical reactions using a density based
thermodynamics package with enhanced buoyancy treatment.
\*---------------------------------------------------------------------------*/
@ -46,17 +46,16 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "createTimeControls.H"
#include "createRDeltaT.H"
#include "initContinuityErrs.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
turbulence->validate();

View File

@ -1,4 +1,5 @@
EXE_INC = \
-I. \
-I$(FOAM_SOLVERS)/combustion/reactingFoam \
-I$(LIB_SRC)/finiteVolume/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \

View File

@ -0,0 +1,3 @@
const volScalarField& psi = thermo.psi();
const volScalarField& T = thermo.T();
const label inertIndex(composition.species()[inertSpecie]);

View File

@ -1,3 +1,5 @@
#include "createRDeltaT.H"
Info<< "Creating reaction model\n" << endl;
autoPtr<combustionModels::rhoCombustionModel> reaction
@ -11,7 +13,14 @@ thermo.validate(args.executable(), "h", "e");
basicMultiComponentMixture& composition = thermo.composition();
PtrList<volScalarField>& Y = composition.Y();
word inertSpecie(thermo.lookup("inertSpecie"));
const word inertSpecie(thermo.lookup("inertSpecie"));
if (!composition.species().found(inertSpecie))
{
FatalIOErrorIn(args.executable().c_str(), thermo)
<< "Inert specie " << inertSpecie << " not found in available species "
<< composition.species()
<< exit(FatalIOError);
}
volScalarField rho
(
@ -40,8 +49,6 @@ volVectorField U
volScalarField& p = thermo.p();
const volScalarField& psi = thermo.psi();
const volScalarField& T = thermo.T();
#include "compressibleCreatePhi.H"
@ -102,3 +109,5 @@ volScalarField dQ
mesh,
dimensionedScalar("dQ", dimEnergy/dimTime, 0.0)
);
#include "createMRF.H"

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -46,17 +46,16 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "createTimeControls.H"
#include "createRDeltaT.H"
#include "initContinuityErrs.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
turbulence->validate();

View File

@ -58,24 +58,24 @@ License
// Flow time scale
{
rDeltaT.dimensionedInternalField() =
rDeltaT.ref() =
(
fvc::surfaceSum(mag(phi))().dimensionedInternalField()
/((2*maxCo)*mesh.V()*rho.dimensionedInternalField())
fvc::surfaceSum(mag(phi))()()
/((2*maxCo)*mesh.V()*rho())
);
// Limit the largest time scale
rDeltaT.max(1/maxDeltaT);
Info<< " Flow = "
<< gMin(1/rDeltaT.internalField()) << ", "
<< gMax(1/rDeltaT.internalField()) << endl;
<< gMin(1/rDeltaT.primitiveField()) << ", "
<< gMax(1/rDeltaT.primitiveField()) << endl;
}
// Reaction source time scale
if (alphaTemp < 1.0)
{
volScalarField::DimensionedInternalField rDeltaTT
volScalarField::Internal rDeltaTT
(
mag(reaction->Sh())/(alphaTemp*rho*thermo.Cp()*T)
);
@ -84,9 +84,9 @@ License
<< gMin(1/(rDeltaTT.field() + VSMALL)) << ", "
<< gMax(1/(rDeltaTT.field() + VSMALL)) << endl;
rDeltaT.dimensionedInternalField() = max
rDeltaT.ref() = max
(
rDeltaT.dimensionedInternalField(),
rDeltaT(),
rDeltaTT
);
}
@ -120,8 +120,8 @@ License
rDeltaT.correctBoundaryConditions();
Info<< " Overall = "
<< gMin(1/rDeltaT.internalField())
<< ", " << gMax(1/rDeltaT.internalField()) << endl;
<< gMin(1/rDeltaT.primitiveField())
<< ", " << gMax(1/rDeltaT.primitiveField()) << endl;
}

View File

@ -1,6 +1,5 @@
#!/bin/sh
cd ${0%/*} || exit 1 # Run from this directory
set -x
wclean libso BCs
wclean

View File

@ -2,10 +2,8 @@
cd ${0%/*} || exit 1 # Run from this directory
# Parse arguments for library compilation
targetType=libso
. $WM_PROJECT_DIR/wmake/scripts/AllwmakeParseArguments
set -x
(wmake $targetType BCs && wmake && wmake rhoCentralDyMFoam)
(wmake $targetType BCs && wmake $targetType && wmake $targetType rhoCentralDyMFoam)
#------------------------------------------------------------------------------

View File

@ -44,17 +44,16 @@ Description
\endvartable
\heading Patch usage
Usage
\table
Property | Description | Required | Default value
pName | Pressure field name | no | p
psiName | Compressibility field name | no | thermo:psi
Property | Description | Required | Default value
p | Pressure field name | no | p
psi | Compressibility field name | no | thermo:psi
\endtable
Example of the boundary condition specification:
\verbatim
myPatch
<patchName>
{
type fixedRho;
}

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -31,7 +31,7 @@ Description
if (mesh.nInternalFaces())
{
scalarField sumAmaxSf(fvc::surfaceSum(amaxSf)().internalField());
scalarField sumAmaxSf(fvc::surfaceSum(amaxSf)().primitiveField());
CoNum = 0.5*gMax(sumAmaxSf/mesh.V().field())*runTime.deltaTValue();

View File

@ -0,0 +1,10 @@
volScalarField& p = thermo.p();
const volScalarField& T = thermo.T();
const volScalarField& psi = thermo.psi();
const volScalarField& mu = thermo.mu();
bool inviscid(true);
if (max(mu.primitiveField()) > 0.0)
{
inviscid = false;
}

View File

@ -1,3 +1,5 @@
#include "createRDeltaT.H"
Info<< "Reading thermophysical properties\n" << endl;
autoPtr<psiThermo> pThermo
@ -6,17 +8,7 @@ autoPtr<psiThermo> pThermo
);
psiThermo& thermo = pThermo();
volScalarField& p = thermo.p();
volScalarField& e = thermo.he();
const volScalarField& T = thermo.T();
const volScalarField& psi = thermo.psi();
const volScalarField& mu = thermo.mu();
bool inviscid(true);
if (max(mu.internalField()) > 0.0)
{
inviscid = false;
}
Info<< "Reading field U\n" << endl;
volVectorField U

View File

@ -29,7 +29,7 @@ Group
Description
Density-based compressible flow solver based on central-upwind schemes of
Kurganov and Tadmor with support for mesh-motion and topology changes
Kurganov and Tadmor with support for mesh-motion and topology changes.
\*---------------------------------------------------------------------------*/
@ -39,16 +39,22 @@ Description
#include "turbulentFluidThermoModel.H"
#include "fixedRhoFvPatchScalarField.H"
#include "directionInterpolate.H"
#include "localEulerDdtScheme.H"
#include "fvcSmooth.H"
#include "motionSolver.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
int main(int argc, char *argv[])
{
#define NO_CONTROL
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createDynamicFvMesh.H"
#include "createFields.H"
#include "createFieldRefs.H"
#include "createTimeControls.H"
turbulence->validate();
@ -188,11 +194,11 @@ int main(int argc, char *argv[])
// --- Solve momentum
solve(fvm::ddt(rhoU) + fvc::div(phiUp));
U.dimensionedInternalField() =
rhoU.dimensionedInternalField()
/rho.dimensionedInternalField();
U.ref() =
rhoU()
/rho();
U.correctBoundaryConditions();
rhoU.boundaryField() == rho.boundaryField()*U.boundaryField();
rhoU.boundaryFieldRef() == rho.boundaryField()*U.boundaryField();
if (!inviscid)
{
@ -226,7 +232,7 @@ int main(int argc, char *argv[])
e = rhoE/rho - 0.5*magSqr(U);
e.correctBoundaryConditions();
thermo.correct();
rhoE.boundaryField() ==
rhoE.boundaryFieldRef() ==
rho.boundaryField()*
(
e.boundaryField() + 0.5*magSqr(U.boundaryField())
@ -243,11 +249,11 @@ int main(int argc, char *argv[])
rhoE = rho*(e + 0.5*magSqr(U));
}
p.dimensionedInternalField() =
rho.dimensionedInternalField()
/psi.dimensionedInternalField();
p.ref() =
rho()
/psi();
p.correctBoundaryConditions();
rho.boundaryField() == psi.boundaryField()*p.boundaryField();
rho.boundaryFieldRef() == psi.boundaryField()*p.boundaryField();
turbulence->correct();

View File

@ -29,7 +29,7 @@ Group
Description
Density-based compressible flow solver based on central-upwind schemes of
Kurganov and Tadmor
Kurganov and Tadmor.
\*---------------------------------------------------------------------------*/
@ -45,13 +45,15 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#define NO_CONTROL
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
#include "createFields.H"
#include "createFieldRefs.H"
#include "createTimeControls.H"
#include "createRDeltaT.H"
turbulence->validate();
@ -181,11 +183,11 @@ int main(int argc, char *argv[])
// --- Solve momentum
solve(fvm::ddt(rhoU) + fvc::div(phiUp));
U.dimensionedInternalField() =
rhoU.dimensionedInternalField()
/rho.dimensionedInternalField();
U.ref() =
rhoU()
/rho();
U.correctBoundaryConditions();
rhoU.boundaryField() == rho.boundaryField()*U.boundaryField();
rhoU.boundaryFieldRef() == rho.boundaryField()*U.boundaryField();
if (!inviscid)
{
@ -219,7 +221,7 @@ int main(int argc, char *argv[])
e = rhoE/rho - 0.5*magSqr(U);
e.correctBoundaryConditions();
thermo.correct();
rhoE.boundaryField() ==
rhoE.boundaryFieldRef() ==
rho.boundaryField()*
(
e.boundaryField() + 0.5*magSqr(U.boundaryField())
@ -236,11 +238,11 @@ int main(int argc, char *argv[])
rhoE = rho*(e + 0.5*magSqr(U));
}
p.dimensionedInternalField() =
rho.dimensionedInternalField()
/psi.dimensionedInternalField();
p.ref() =
rho()
/psi();
p.correctBoundaryConditions();
rho.boundaryField() == psi.boundaryField()*p.boundaryField();
rho.boundaryFieldRef() == psi.boundaryField()*p.boundaryField();
turbulence->correct();

View File

@ -11,10 +11,10 @@
);
// Set the reciprocal time-step from the local Courant number
rDeltaT.dimensionedInternalField() = max
rDeltaT.ref() = max
(
1/dimensionedScalar("maxDeltaT", dimTime, maxDeltaT),
fvc::surfaceSum(amaxSf)().dimensionedInternalField()
fvc::surfaceSum(amaxSf)()()
/((2*maxCo)*mesh.V())
);
@ -24,6 +24,6 @@
fvc::smooth(rDeltaT, rDeltaTSmoothingCoeff);
Info<< "Flow time scale min/max = "
<< gMin(1/rDeltaT.internalField())
<< ", " << gMax(1/rDeltaT.internalField()) << endl;
<< gMin(1/rDeltaT.primitiveField())
<< ", " << gMax(1/rDeltaT.primitiveField()) << endl;
}

View File

@ -0,0 +1 @@
const volScalarField& psi = thermo.psi();

View File

@ -1,3 +1,5 @@
#include "createRDeltaT.H"
Info<< "Reading thermophysical properties\n" << endl;
autoPtr<psiThermo> pThermo
@ -8,7 +10,6 @@ psiThermo& thermo = pThermo();
thermo.validate(args.executable(), "h", "e");
volScalarField& p = thermo.p();
const volScalarField& psi = thermo.psi();
volScalarField rho
(
@ -90,3 +91,5 @@ volScalarField dpdt
Info<< "Creating field kinetic energy K\n" << endl;
volScalarField K("K", 0.5*magSqr(U));
#include "createMRF.H"

View File

@ -9,8 +9,7 @@ EXE_INC = \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/sampling/lnInclude \
-I$(LIB_SRC)/dynamicFvMesh/lnInclude \
-I$(LIB_SRC)/dynamicMesh/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/dynamicMesh/lnInclude
EXE_LIBS = \
-lcompressibleTransportModels \
@ -24,5 +23,4 @@ EXE_LIBS = \
-lfvOptions \
-ldynamicFvMesh \
-ltopoChangerFvMesh \
-ldynamicMesh \
-lmeshTools
-ldynamicMesh

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,8 +28,8 @@ Group
grpCompressibleSolvers grpMovingMeshSolvers
Description
Transient solver for laminar or turbulent flow of compressible fluids
for HVAC and similar applications.
Transient solver for turbulent flow of compressible fluids for HVAC and
similar applications, with optional mesh motion and mesh topology changes.
Uses the flexible PIMPLE (PISO-SIMPLE) solution for time-resolved and
pseudo-transient simulations.
@ -51,16 +51,15 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createDynamicFvMesh.H"
pimpleControl pimple(mesh);
#include "createRDeltaT.H"
#include "createControl.H"
#include "initContinuityErrs.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "createRhoUf.H"
#include "createControls.H"

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,8 +28,8 @@ Group
grpCompressibleSolvers
Description
Transient solver for laminar or turbulent flow of compressible fluids
for HVAC and similar applications.
Transient solver for turbulent flow of compressible fluids for HVAC and
similar applications.
Uses the flexible PIMPLE (PISO-SIMPLE) solution for time-resolved and
pseudo-transient simulations.
@ -49,17 +49,16 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "createTimeControls.H"
#include "createRDeltaT.H"
#include "initContinuityErrs.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
turbulence->validate();

View File

@ -26,11 +26,11 @@
volScalarField rDeltaT0("rDeltaT0", rDeltaT);
// Set the reciprocal time-step from the local Courant number
rDeltaT.dimensionedInternalField() = max
rDeltaT.ref() = max
(
1/dimensionedScalar("maxDeltaT", dimTime, maxDeltaT),
fvc::surfaceSum(mag(phi))().dimensionedInternalField()
/((2*maxCo)*mesh.V()*rho.dimensionedInternalField())
fvc::surfaceSum(mag(phi))()()
/((2*maxCo)*mesh.V()*rho())
);
if (pimple.transonic())
@ -41,11 +41,11 @@
fvc::interpolate(psi)*fvc::flux(U)
);
rDeltaT.dimensionedInternalField() = max
rDeltaT.ref() = max
(
rDeltaT.dimensionedInternalField(),
fvc::surfaceSum(mag(phid))().dimensionedInternalField()
/((2*maxCo)*mesh.V()*psi.dimensionedInternalField())
rDeltaT(),
fvc::surfaceSum(mag(phid))()()
/((2*maxCo)*mesh.V()*psi())
);
}
@ -53,8 +53,8 @@
rDeltaT.correctBoundaryConditions();
Info<< "Flow time scale min/max = "
<< gMin(1/rDeltaT.internalField())
<< ", " << gMax(1/rDeltaT.internalField()) << endl;
<< gMin(1/rDeltaT.primitiveField())
<< ", " << gMax(1/rDeltaT.primitiveField()) << endl;
if (rDeltaTSmoothingCoeff < 1.0)
{
@ -62,8 +62,8 @@
}
Info<< "Smoothed flow time scale min/max = "
<< gMin(1/rDeltaT.internalField())
<< ", " << gMax(1/rDeltaT.internalField()) << endl;
<< gMin(1/rDeltaT.primitiveField())
<< ", " << gMax(1/rDeltaT.primitiveField()) << endl;
// Limit rate of change of time scale
// - reduce as much as required
@ -79,7 +79,7 @@
*max(rDeltaT/rDeltaT0, scalar(1) - rDeltaTDampingCoeff);
Info<< "Damped flow time scale min/max = "
<< gMin(1/rDeltaT.internalField())
<< ", " << gMax(1/rDeltaT.internalField()) << endl;
<< gMin(1/rDeltaT.primitiveField())
<< ", " << gMax(1/rDeltaT.primitiveField()) << endl;
}
}

View File

@ -0,0 +1 @@
const volScalarField& psi = thermo.psi();

View File

@ -1,10 +1,9 @@
Info<< "Reading thermophysical properties\n" << endl;
autoPtr<psiThermo> pThermo
autoPtr<rhoThermo> pThermo
(
psiThermo::New(mesh)
rhoThermo::New(mesh)
);
psiThermo& thermo = pThermo();
rhoThermo& thermo = pThermo();
thermo.validate(args.executable(), "h", "e");
volScalarField rho
@ -21,7 +20,6 @@ volScalarField rho
);
volScalarField& p = thermo.p();
const volScalarField& psi = thermo.psi();
Info<< "Reading field U\n" << endl;
volVectorField U
@ -81,3 +79,5 @@ autoPtr<compressible::turbulenceModel> turbulence
);
dimensionedScalar initialMass = fvc::domainIntegrate(rho);
#include "createMRF.H"

View File

@ -1,4 +1,6 @@
{
//const volScalarField& psi = thermo.psi();
volScalarField rAU(1.0/UEqn.A());
surfaceScalarField rhorAUf("rhorAUf", fvc::interpolate(rho*rAU));
volVectorField HbyA(constrainHbyA(rAU*UEqn.H(), U, p));
@ -93,6 +95,9 @@
rho = max(rho, rhoMin);
rho = min(rho, rhoMax);
thermo.rho() = max(thermo.rho(), rhoMin);
thermo.rho() = min(thermo.rho(), rhoMax);
if (!simple.transonic())
{
rho.relax();

View File

@ -109,6 +109,8 @@ if (closedVolume)
rho = thermo.rho();
rho = max(rho, rhoMin);
rho = min(rho, rhoMax);
thermo.rho() = max(thermo.rho(), rhoMin);
thermo.rho() = min(thermo.rho(), rhoMax);
if (!simple.transonic())
{

View File

@ -1,4 +1,5 @@
EXE_INC = \
-I. \
-I.. \
-I$(LIB_SRC)/transportModels/compressible/lnInclude \
-I$(LIB_SRC)/thermophysicalModels/basic/lnInclude \

View File

@ -80,3 +80,5 @@ autoPtr<compressible::turbulenceModel> turbulence
);
dimensionedScalar initialMass = fvc::domainIntegrate(rho);
#include "createMRF.H"

View File

@ -86,6 +86,10 @@
rho = thermo.rho();
rho = max(rho, rhoMin);
rho = min(rho, rhoMax);
thermo.rho() = max(thermo.rho(), rhoMin);
thermo.rho() = min(thermo.rho(), rhoMax);
rho.relax();
Info<< "rho max/min : "
<< max(rho).value() << " "

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,9 +28,8 @@ Group
grpCompressibleSolvers
Description
Steady-state solver for turbulent flow of compressible fluids with
RANS turbulence modelling, implicit or explicit porosity treatment
and run-time selectable finite volume sources.
Steady-state solver for turbulent flow of compressible fluids, with
implicit or explicit porosity treatment and optional sources.
\*---------------------------------------------------------------------------*/
@ -45,14 +44,13 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
simpleControl simple(mesh);
#include "createControl.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFvOptions.H"
#include "createZones.H"
#include "initContinuityErrs.H"

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,13 +28,12 @@ Group
grpCompressibleSolvers
Description
Steady-state SIMPLE solver for laminar or turbulent RANS flow of
compressible fluids.
Steady-state solver for turbulent flow of compressible fluids.
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "psiThermo.H"
#include "rhoThermo.H"
#include "turbulentFluidThermoModel.H"
#include "simpleControl.H"
#include "fvOptions.H"
@ -43,14 +42,14 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
simpleControl simple(mesh);
#include "createControl.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "initContinuityErrs.H"

View File

@ -1,5 +1,4 @@
EXE_INC = \
-I$(LIB_SRC)/transportModels/compressible/lnInclude \
-I$(LIB_SRC)/transportModels/compressible/lnInclude \
-I$(LIB_SRC)/thermophysicalModels/basic/lnInclude \
-I$(LIB_SRC)/TurbulenceModels/turbulenceModels/lnInclude \

View File

@ -0,0 +1,2 @@
volScalarField& e = thermo.he();
const volScalarField& psi = thermo.psi();

View File

@ -8,8 +8,6 @@ psiThermo& thermo = pThermo();
thermo.validate(args.executable(), "e");
volScalarField& p = thermo.p();
volScalarField& e = thermo.he();
const volScalarField& psi = thermo.psi();
volScalarField rho
(
@ -54,3 +52,5 @@ autoPtr<compressible::turbulenceModel> turbulence
Info<< "Creating field kinetic energy K\n" << endl;
volScalarField K("K", 0.5*magSqr(U));
#include "createMRF.H"

View File

@ -2,7 +2,6 @@ EXE_INC = \
-I.. \
-I../../rhoPimpleFoam/rhoPimpleDyMFoam \
-I$(LIB_SRC)/transportModels/compressible/lnInclude \
-I$(LIB_SRC)/transportModels/compressible/lnInclude \
-I$(LIB_SRC)/thermophysicalModels/basic/lnInclude \
-I$(LIB_SRC)/TurbulenceModels/turbulenceModels/lnInclude \
-I$(LIB_SRC)/TurbulenceModels/compressible/lnInclude \

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,8 +28,8 @@ Group
grpCompressibleSolvers grpMovingMeshSolvers
Description
Transient solver for trans-sonic/supersonic, laminar or turbulent flow
of a compressible gas with mesh motion..
Transient solver for trans-sonic/supersonic, turbulent flow of a
compressible gas, with optional mesh motion and mesh topology changes.
\*---------------------------------------------------------------------------*/
@ -45,20 +45,20 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createDynamicFvMesh.H"
#include "initContinuityErrs.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "createControls.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "createRhoUf.H"
#include "compressibleCourantNo.H"
#include "setInitialDeltaT.H"
#include "initContinuityErrs.H"
turbulence->validate();

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,8 +28,8 @@ Group
grpCompressibleSolvers
Description
Transient solver for trans-sonic/supersonic, laminar or turbulent flow
of a compressible gas.
Transient solver for trans-sonic/supersonic, turbulent flow of a
compressible gas.
\*---------------------------------------------------------------------------*/
@ -43,14 +43,14 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pimpleControl pimple(mesh);
#include "createControl.H"
#include "createFields.H"
#include "createMRF.H"
#include "createFieldRefs.H"
#include "createFvOptions.H"
#include "initContinuityErrs.H"

View File

@ -1,3 +1,6 @@
#include "readThermodynamicProperties.H"
#include "readTransportProperties.H"
Info<< "Reading field p\n" << endl;
volScalarField p
(

View File

@ -40,14 +40,12 @@ Description
int main(int argc, char *argv[])
{
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pimpleControl pimple(mesh);
#include "readThermodynamicProperties.H"
#include "readTransportProperties.H"
#include "createControl.H"
#include "createFields.H"
#include "initContinuityErrs.H"

View File

@ -0,0 +1,2 @@
Info<< nl << "Constructing dsmcCloud " << endl;
dsmcCloud dsmc("dsmc", mesh);

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011-2015 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,8 +28,8 @@ Group
grpDiscreteMethodsSolvers
Description
Direct simulation Monte Carlo (DSMC) solver for 3D, transient, multi-
species flows
Direct simulation Monte Carlo (DSMC) solver for, transient, multi-species
flows.
\*---------------------------------------------------------------------------*/
@ -40,16 +40,16 @@ Description
int main(int argc, char *argv[])
{
#define NO_CONTROL
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
#include "createFields.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Info<< nl << "Constructing dsmcCloud " << endl;
dsmcCloud dsmc("dsmc", mesh);
Info<< "\nStarting time loop\n" << endl;
while (runTime.loop())

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,7 +28,7 @@ Group
grpDiscreteMethodsSolvers
Description
Equilibrates and/or preconditions molecular dynamics systems
Solver to equilibrate and/or precondition molecular dynamics systems.
\*---------------------------------------------------------------------------*/
@ -85,7 +85,7 @@ int main(int argc, char *argv[])
runTime.write();
if (runTime.outputTime())
if (runTime.writeTime())
{
nAveragingSteps = 0;
}

View File

@ -1,55 +1,17 @@
Info<< "\nReading field U\n" << endl;
volVectorField U
(
IOobject
(
"U",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
word polyatomicCloudName("polyatomicCloud");
potential polyPot
Info<< "\nReading field U\n" << endl;
volVectorField U
(
IOobject
(
"U",
runTime.timeName(),
mesh,
IOdictionary
(
IOobject
(
polyatomicCloudName + "Properties",
mesh.time().constant(),
mesh,
IOobject::MUST_READ_IF_MODIFIED,
IOobject::NO_WRITE,
false
)
)
);
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
polyatomicCloud polyatomics(polyatomicCloudName, mesh, polyPot);
potential pot(mesh);
word monoatomicCloudName("monoatomicCloud");
potential monoPot
(
mesh,
IOdictionary
(
IOobject
(
monoatomicCloudName + "Properties",
mesh.time().constant(),
mesh,
IOobject::MUST_READ_IF_MODIFIED,
IOobject::NO_WRITE,
false
)
)
);
monoatomicCloud monoatomics(monoatomicCloudName, mesh, monoPot);
moleculeCloud molecules(mesh, pot);

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -28,41 +28,28 @@ Group
grpDiscreteMethodsSolvers
Description
Molecular dynamics solver for fluid dynamics
Molecular dynamics solver for fluid dynamics.
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "md.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
int main(int argc, char *argv[])
{
#define NO_CONTROL
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
#include "createFields.H"
#include "temperatureAndPressureVariables.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Info<< "\nReading field U\n" << endl;
volVectorField U
(
IOobject
(
"U",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
potential pot(mesh);
moleculeCloud molecules(mesh, pot);
#include "temperatureAndPressureVariables.H"
label nAveragingSteps = 0;
Info<< "\nStarting time loop\n" << endl;
@ -76,12 +63,11 @@ int main(int argc, char *argv[])
molecules.evolve();
#include "meanMomentumEnergyAndNMols.H"
#include "temperatureAndPressure.H"
runTime.write();
if (runTime.outputTime())
if (runTime.writeTime())
{
nAveragingSteps = 0;
}

View File

@ -0,0 +1,2 @@
pisoControl piso(mesh);
pisoControl bpiso(mesh, "BPISO");

View File

@ -1,47 +1,49 @@
IOobject phiBHeader
(
"phiB",
runTime.timeName(),
mesh,
IOobject::NO_READ
);
IOobject phiBHeader
(
"phiB",
runTime.timeName(),
mesh,
IOobject::NO_READ
);
surfaceScalarField* phiBPtr;
surfaceScalarField* phiBPtr = nullptr;
if (phiBHeader.typeHeaderOk<surfaceScalarField>(true))
{
Info<< "Reading field phiB\n" << endl;
{
Info<< "Reading face flux ";
phiBPtr = new surfaceScalarField
phiBPtr = new surfaceScalarField
(
IOobject
(
IOobject
(
"phiB",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
}
else
{
Info<< "Calculating face flux\n" << endl;
"phiB",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
}
else
{
Info<< "Calculating face flux ";
phiBPtr = new surfaceScalarField
phiBPtr = new surfaceScalarField
(
IOobject
(
IOobject
(
"phiB",
runTime.timeName(),
mesh,
IOobject::NO_READ,
IOobject::AUTO_WRITE
),
fvc::flux(B)
);
}
"phiB",
runTime.timeName(),
mesh,
IOobject::NO_READ,
IOobject::AUTO_WRITE
),
fvc::flux(B)
);
}
surfaceScalarField& phiB = *phiBPtr;
surfaceScalarField& phiB = *phiBPtr;
Info<< phiB.name() << nl << endl;

View File

@ -58,14 +58,12 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
pisoControl piso(mesh);
pisoControl bpiso(mesh, "BPISO");
#include "createControl.H"
#include "createFields.H"
#include "initContinuityErrs.H"

View File

@ -2,7 +2,7 @@
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2011 OpenFOAM Foundation
\\ / A nd | Copyright (C) 2011-2016 OpenFOAM Foundation
\\/ M anipulation |
-------------------------------------------------------------------------------
License
@ -40,8 +40,10 @@ Description
int main(int argc, char *argv[])
{
#include "setRootCase.H"
#define NO_CONTROL
#include "postProcess.H"
#include "setRootCase.H"
#include "createTime.H"
#include "createMesh.H"
#include "createFields.H"
@ -72,7 +74,7 @@ int main(int argc, char *argv[])
runTime.write();
if (runTime.outputTime())
if (runTime.writeTime())
{
writeCellGraph(V, runTime.graphFormat());
writeCellGraph(delta, runTime.graphFormat());

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